SRR1779906_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779906_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	174609
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	11336	6.492219759577113	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCCGT	8680	4.971106873070689	No Hit
ATTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCCGT	3667	2.100120841422836	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTAGTATGCCGT	1555	0.8905611967309818	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCCG	979	0.5606812936332034	No Hit
ATTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTAGTATGCCGT	691	0.39574134208431405	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCC	579	0.3315980275930794	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGACGT	411	0.23538305585622735	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTAGTATGCCG	325	0.18613015365760072	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCGCGTATGCCGT	315	0.18040307200659758	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATTCCGT	248	0.14203162494487684	No Hit
ATTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGACGT	236	0.13515912696367313	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCC	213	0.12198683916636599	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTAAGCCGT	208	0.11912329834086444	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGGATGCCGT	185	0.10595101054355734	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCC	182	0.10423288604825638	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCGAGTATGCCGT	179	0.10251476155295546	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTAGTATGACGT	179	0.10251476155295546	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGATGCG	15	0.002219754	70.015755	27
CTACTGG	15	0.0022222777	69.995705	9
CGACATA	30	1.0196345E-7	69.995705	48
CGAATGC	30	1.0196345E-7	69.995705	41
AGCCGTC	60	0.0	64.16273	45
GCCGTAT	205	0.0	61.459644	46
TAAGACG	40	1.0606527E-8	61.246243	43
AGGGGGG	2335	0.0	60.702915	70
TTAAGCA	215	0.0	60.228867	52
TCTTAAG	175	0.0	59.996323	50
GTATTCT	35	2.9625153E-7	59.996315	49
GTCTTCA	170	0.0	59.70222	49
AAGCCGT	100	0.0	59.49635	44
ATTATAC	930	0.0	59.458717	1
CTTAAGC	195	0.0	59.22714	51
GCCGTCT	1090	0.0	58.43678	46
CGTAATC	150	0.0	58.32975	48
CCGTCTT	1115	0.0	58.068188	47
GTATTAA	145	0.0	57.92748	49
TCTCGTA	2070	0.0	57.315323	38