SRR1779901_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779901_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	392299
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	16998	4.33291953331515	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	13959	3.558255310362759	No Hit
ATTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	5257	1.3400492991315298	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCG	2984	0.7606443044718442	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	1339	0.3413212880991285	No Hit
ATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTCTT	881	0.22457360329748485	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	541	0.13790501632683236	No Hit
CTTAAACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	463	0.11802222284532972	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	403	0.10272776632109692	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACGCG	15	0.0022243387	69.9958	12
CGCTTCG	15	0.0022243387	69.9958	45
AGGGGGG	2870	0.0	61.101677	70
GTACCGA	20	0.0069502927	52.496845	7
AGTAGCG	20	0.0069502927	52.496845	2
AAGGGGG	3380	0.0	51.67508	69
TATGCCG	3525	0.0	50.436684	43
ATGCCGT	3540	0.0	50.420696	44
CGTATGC	3560	0.0	50.235744	41
TGCCGTC	3555	0.0	50.207954	45
CGTCTTC	3540	0.0	50.130493	48
CCGTCTT	3510	0.0	50.053974	47
TCGTATG	3615	0.0	50.05232	40
GTATGCC	3570	0.0	49.996994	42
CTCGTAT	3580	0.0	49.857338	39
TCTCGTA	3560	0.0	49.7442	38
GCCGTCT	3560	0.0	49.7442	46
ATCTCGT	3550	0.0	49.687153	37
AATCTCG	3585	0.0	49.592556	36
ATCGTAT	50	6.190385E-8	48.99706	39