##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779874_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 148966 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.74457929997449 34.0 23.0 34.0 12.0 34.0 2 28.265375991837065 34.0 23.0 34.0 12.0 34.0 3 28.03807580253212 34.0 23.0 34.0 11.0 34.0 4 28.355201858142127 34.0 23.0 34.0 12.0 34.0 5 28.24211565055113 34.0 23.0 34.0 11.0 34.0 6 31.135554421814373 37.0 26.0 38.0 12.0 38.0 7 31.294241639031725 37.0 26.0 38.0 12.0 38.0 8 30.705469704496327 37.0 26.0 38.0 11.0 38.0 9 31.398473477169286 37.0 27.0 38.0 11.0 38.0 10-11 30.11295530523744 36.5 24.5 38.0 11.0 38.0 12-13 30.788065733120312 37.0 26.0 38.0 11.0 38.0 14-15 29.76713813890418 36.0 22.5 38.0 11.0 38.0 16-17 30.218006122202382 36.5 24.0 38.0 11.0 38.0 18-19 30.849079655760374 37.0 26.0 38.0 11.0 38.0 20-21 29.914913470187827 36.0 23.5 38.0 11.0 38.0 22-23 30.59665292751366 37.0 24.5 38.0 11.0 38.0 24-25 30.927553938482607 37.0 26.0 38.0 11.0 38.0 26-27 29.938251010297652 37.0 22.5 38.0 11.0 38.0 28-29 30.890203133600956 37.0 26.0 38.0 11.0 38.0 30-31 31.145147214800694 37.0 26.0 38.0 11.0 38.0 32-33 31.316377562665306 38.0 26.0 38.0 11.0 38.0 34-35 31.31958634856276 37.0 26.0 38.0 11.0 38.0 36-37 30.885155001812493 37.0 25.5 38.0 11.0 38.0 38-39 30.83229394626962 37.0 25.0 38.0 11.0 38.0 40-41 30.83545909804922 37.0 25.5 38.0 11.0 38.0 42-43 31.136400252406588 37.0 26.0 38.0 11.0 38.0 44-45 31.197420887987864 37.0 26.0 38.0 11.0 38.0 46-47 31.0936052522052 37.0 26.0 38.0 11.0 38.0 48-49 30.807207684975097 37.0 25.0 38.0 11.0 38.0 50-51 30.32106990856974 37.0 24.0 38.0 11.0 38.0 52-53 30.816233234429333 37.0 25.5 38.0 11.0 38.0 54-55 30.911708040760978 37.0 25.5 38.0 11.0 38.0 56-57 30.954499684491765 37.0 25.5 38.0 11.0 38.0 58-59 31.063145281473624 37.0 25.5 38.0 11.0 38.0 60-61 31.024270638937743 37.0 25.0 38.0 11.0 38.0 62-63 30.983254568156493 37.0 25.0 38.0 11.0 38.0 64-65 30.9716848139844 37.0 25.0 38.0 11.0 38.0 66-67 30.905397876025404 37.0 25.0 38.0 11.0 38.0 68-69 30.40926788663185 37.0 24.0 38.0 11.0 38.0 70-71 30.493206503497444 37.0 24.0 38.0 11.0 38.0 72-73 30.529651061316006 37.0 24.0 38.0 11.0 38.0 74-75 30.598804425170847 37.0 24.0 38.0 11.0 38.0 76 29.897654498341904 36.0 23.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 77.0 13 887.0 14 2587.0 15 4015.0 16 5254.0 17 6042.0 18 6094.0 19 5217.0 20 3926.0 21 3022.0 22 2272.0 23 1724.0 24 1467.0 25 1420.0 26 1545.0 27 1622.0 28 1792.0 29 2161.0 30 2605.0 31 3125.0 32 4201.0 33 5213.0 34 7417.0 35 11069.0 36 20123.0 37 44086.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.48123732932347 21.79557751433213 14.552985244955224 31.170199911389172 2 19.032530913094263 21.845924573392587 35.359746519339986 23.76179799417317 3 16.327886900366526 26.492622477612343 32.50204744706846 24.677443174952675 4 12.023548997757878 25.113113059355825 29.70006578682384 33.163272156062455 5 16.691728313843427 33.43850274559295 32.32214062269242 17.54762831787119 6 24.866744538875686 42.46653508948591 15.330755494689921 17.335964876948484 7 21.558570594198326 33.80505783548272 18.983330759883724 25.653040810435222 8 18.70544165626133 43.65341496489037 17.153367973040105 20.487775405808193 9 21.329546904056983 19.900236987506126 18.870381932555908 39.89983417588098 10-11 21.128207193780966 29.819685557390475 23.617096977752716 25.435010271075846 12-13 20.731576332854477 25.057395647328924 25.948538592699006 28.2624894271176 14-15 24.004631960527643 27.5829892927869 21.676232672104184 26.736146074581278 16-17 24.70748162320008 27.581982344846107 21.974960561205652 25.735575470748163 18-19 20.384660568935136 27.52806914491902 25.25266426113955 26.83460602500629 20-21 24.204852113905186 26.429185183196164 23.41138246311239 25.954580239786264 22-23 24.439961601202985 26.321972570369823 22.96711263870894 26.270953189718256 24-25 20.422398109546922 29.90789411851583 22.580710128290335 27.088997643646913 26-27 23.269739403622303 29.584267550984787 23.20764469744774 23.93834834794517 28-29 20.855417521222638 29.34044502925351 24.667604300584397 25.136533148939456 30-31 21.80661099326012 28.451169410058807 24.642866732901908 25.099352863779167 32-33 19.55721291171446 29.346056637275076 25.483081653134448 25.61364879787602 34-35 19.85190704918418 30.512451287421833 24.494077288945725 25.14156437444826 36-37 22.492312443770057 27.400263189698006 25.056062091283852 25.051362275248085 38-39 22.79224179601482 25.860344271980235 26.600851280949566 24.746562651055374 40-41 20.63303460544423 28.5969858691639 25.55499614003289 25.214983385358973 42-43 18.517101332527773 27.917967307756857 26.63343738462055 26.931493975094824 44-45 18.627671465542416 25.95219473880309 28.009814814193213 27.41031898146128 46-47 19.66125247968421 27.16726917538542 26.919216839363457 26.25226150556691 48-49 20.04826620929007 27.22442444727135 26.673625772410393 26.05368357102819 50-51 23.231763805534296 27.21700836454935 24.425356802405982 25.12587102751037 52-53 17.17321248741188 29.07821416582746 26.221886539107082 27.526686807653576 54-55 18.68475290863561 26.893046799997318 26.006525548327325 28.415674743039748 56-57 19.545616284768613 28.09552262855071 24.65038368837656 27.708477398304115 58-59 18.50326297131808 28.258607261789663 25.744575142335375 27.493554624556882 60-61 17.703696243327627 27.141706113405178 25.881089065699804 29.273508577567398 62-63 19.089834912152316 27.652382327074005 24.99916079784627 28.258621962927403 64-65 19.06411663796374 26.817936141856258 24.791274309367225 29.32667291081278 66-67 18.429728205403663 30.1921630767578 22.938040500617713 28.44006821722082 68-69 19.03897211099214 31.230049910885405 22.43472481883389 27.296253159288558 70-71 19.37394900161447 31.398209652570564 21.916148369924578 27.311692975890388 72-73 20.6704416913095 29.712375345307347 22.175528576175722 27.441654387207432 74-75 19.756028787797412 28.929453783769265 23.61062624201085 27.703891186422467 76 19.206240517715926 31.00119493562116 21.974731810797383 27.817832735865522 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.5 2 0.5 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 3.5 10 3.5 11 1.0 12 2.0 13 3.0 14 3.0 15 13.0 16 32.0 17 40.0 18 59.5 19 111.0 20 205.0 21 267.0 22 291.5 23 410.5 24 603.5 25 702.0 26 843.5 27 1081.5 28 1398.0 29 1618.0 30 1865.5 31 2463.5 32 2999.5 33 3185.0 34 3529.0 35 4109.5 36 4622.5 37 4899.0 38 5206.5 39 5745.5 40 6202.0 41 6742.0 42 7057.0 43 7154.5 44 7427.0 45 7649.0 46 7696.0 47 7678.5 48 7542.0 49 7290.0 50 7157.0 51 6928.5 52 6395.5 53 5927.0 54 5763.0 55 5478.5 56 4903.5 57 4312.5 58 4012.0 59 3695.0 60 3072.5 61 2530.5 62 2294.0 63 2148.5 64 1820.0 65 1476.5 66 1215.5 67 1115.0 68 1001.0 69 831.5 70 720.0 71 664.0 72 623.5 73 519.0 74 398.5 75 342.0 76 328.5 77 289.0 78 227.0 79 191.0 80 181.0 81 149.0 82 117.0 83 107.0 84 92.5 85 73.5 86 58.5 87 48.0 88 42.5 89 29.0 90 19.0 91 19.5 92 22.0 93 17.5 94 9.0 95 5.5 96 6.0 97 5.0 98 5.5 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.00268517648322436 7 0.00604164708725481 8 0.00268517648322436 9 0.008726823570479169 10-11 0.00268517648322436 12-13 0.0 14-15 6.7129412080609E-4 16-17 6.7129412080609E-4 18-19 0.002349529422821315 20-21 0.0 22-23 0.00201388236241827 24-25 0.00469905884564263 26-27 0.0 28-29 0.006377294147657855 30-31 0.00134258824161218 32-33 3.35647060403045E-4 34-35 0.003692117664433495 36-37 0.01611105889934616 38-39 0.00939811769128526 40-41 6.7129412080609E-4 42-43 6.7129412080609E-4 44-45 0.005034705906045675 46-47 0.003692117664433495 48-49 3.35647060403045E-4 50-51 0.00268517648322436 52-53 0.01074070593289744 54-55 0.008726823570479169 56-57 0.01141200005370353 58-59 0.01476847065773398 60-61 0.02081011774498879 62-63 0.01006941181209135 64-65 0.017789294201361383 66-67 0.0201388236241827 68-69 3.35647060403045E-4 70-71 3.35647060403045E-4 72-73 0.003020823543627405 74-75 0.00939811769128526 76 0.00268517648322436 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 148966.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.76024109280412 #Duplication Level Percentage of deduplicated Percentage of total 1 80.85950876996641 58.02497843978498 2 8.713117649205813 12.505108463539516 3 5.100634699895783 10.98068327372532 4 2.7999402478022044 8.036975489109278 5 1.412223398532969 5.067074577781253 6 0.6581593116214638 2.833780252765814 7 0.2696549520686205 1.3545353060618923 8 0.11784917021027365 0.6765507893500917 9 0.04294503527890879 0.27735714768181263 >10 0.024968043670971555 0.20210520760727987 >50 9.98721746599884E-4 0.040851052592761436 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00537035296644872 0.0 2 0.0 0.0 0.0 0.00537035296644872 0.0 3 0.0 0.0 0.0 0.00537035296644872 0.0 4 0.0 0.0 0.0 0.01208329417450962 0.0 5 0.0 0.0 0.0 0.01208329417450962 0.0 6 0.0 0.0 0.0 0.01208329417450962 0.0 7 0.0 0.0 0.0 0.014768470657733979 0.0 8 0.0 0.0 0.0 0.014768470657733979 0.0 9 0.0 0.0 0.0 0.0201388236241827 0.0 10 0.0 0.0 0.0 0.02148141186579488 0.0 11 0.0 0.0 0.0 0.02148141186579488 0.0 12 0.0 0.0 0.0 0.02349529422821315 0.0 13 0.0 0.0 0.0 0.02550917659063142 0.0 14 0.0 0.0 0.0 0.028194353073855778 0.0 15 0.0 0.0 0.0 0.029536941315467958 0.0 16 0.0 0.0 0.0 0.030208235436274048 0.0 17 0.0 0.0 0.0 0.030208235436274048 0.0 18 0.0 0.0 0.0 0.03222211779869232 0.0 19 0.0 0.0 0.0 0.03759247076514104 0.0 20 0.0 0.0 0.0 0.04162023548997758 0.0 21 0.0 0.0 0.0 0.04497670609400803 0.0 22 0.0 0.0 0.0 0.05034705906045675 0.0 23 0.0 0.0 0.0 0.05504611790609938 0.0 24 0.0 0.0 0.0 0.061087764993354186 0.0 25 0.0 0.0 0.0 0.061087764993354186 0.0 26 0.0 0.0 0.0 0.06377294147657855 0.0 27 0.0 0.0 0.0 0.07182847092625162 0.0 28 0.0 0.0 0.0 0.08525435334237343 0.0 29 0.0 0.0 0.0 0.10472188284575004 0.0 30 0.0 0.0 0.0 0.12418941234912664 0.0 31 0.0 0.0 0.0 0.15171247130217633 0.0 32 0.0 0.0 0.0 0.18527717734248084 0.0 33 0.0 0.0 0.0 0.22488353047004014 0.0 34 0.0 0.0 0.0 0.290670354309037 0.0 35 0.0 0.0 0.0 0.402776472483654 0.0 36 0.0 0.0 0.0 0.5692574144435643 0.0 37 0.0 0.0 0.0 0.8082381214505323 0.0 38 0.0 0.0 0.0 1.1452277700951896 0.0 39 0.0 0.0 0.0 1.4828887128606527 0.0 40 0.0 0.0 0.0 1.909831773693326 0.0 41 0.0 0.0 0.0 2.4837882469825328 0.0 42 0.0 0.0 0.0 3.1074204852113905 0.0 43 0.0 0.0 0.0 3.6444557818562626 0.0 44 0.0 0.0 0.0 4.366768255843615 0.0 45 0.0 0.0 0.0 5.032020729562451 0.0 46 0.0 0.0 0.0 5.567042143844904 0.0 47 0.0 0.0 0.0 6.085281205107206 0.0 48 0.0 0.0 0.0 6.710927325698481 0.0 49 0.0 0.0 0.0 7.19023132795403 0.0 50 0.0 0.0 0.0 7.705785212733107 0.0 51 0.0 0.0 0.0 8.305922156733752 0.0 52 0.0 0.0 0.0 8.884577688868601 0.0 53 0.0 0.0 0.0 9.498140515285368 0.0 54 0.0 0.0 0.0 10.06068498852087 0.0 55 0.0 0.0 0.0 10.571539814454304 0.0 56 0.0 0.0 0.0 11.013922640065518 0.0 57 0.0 0.0 0.0 11.529476524844595 0.0 58 0.0 0.0 0.0 12.026234174241102 0.0 59 0.0 0.0 0.0 12.406857940738155 0.0 60 0.0 0.0 0.0 12.836486178054052 0.0 61 0.0 0.0 0.0 13.273498650698818 0.0 62 0.0 0.0 0.0 13.725279594001316 0.0 63 0.0 0.0 0.0 14.193842890323966 0.0 64 0.0 0.0 0.0 14.576480539183438 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGAT 15 0.002221094 70.0 35 GCCGTAA 15 0.002221094 70.0 54 GGTATAA 25 2.3842632E-4 55.999996 1 ACGAAGT 25 2.3842632E-4 55.999996 24 CGGTGGT 140 0.0 52.500004 46 TGGTCGC 140 0.0 52.500004 49 GGTCGCC 160 0.0 52.5 50 GGACTCG 20 0.0069402233 52.5 14 ATATCGG 20 0.0069402233 52.5 42 TCTCGTA 20 0.0069402233 52.5 47 GCTTAAG 20 0.0069402233 52.5 1 TCGTCCC 20 0.0069402233 52.5 49 GTTCCGC 20 0.0069402233 52.5 8 GCGTGGT 20 0.0069402233 52.5 7 GATCTCG 160 0.0 52.5 41 GTTGGGT 20 0.0069402233 52.5 1 TAGTGTA 75 0.0 51.333332 34 TCGGTGG 145 0.0 50.689655 45 CGTGTAG 35 2.0786518E-5 50.000004 35 GTGGTCG 140 0.0 50.000004 48 >>END_MODULE