SRR1779870_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779870_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	209024
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTCGAT	15	0.0022223203	70.000244	43
ACGCGTG	25	2.3864557E-4	56.000195	34
CTCGATC	20	0.006944025	52.50018	44
TCCGGTG	20	0.006944025	52.50018	8
GCCGTAT	55	2.2664608E-9	50.92145	54
TCGGTGG	105	0.0	50.00017	45
GCGGTCG	30	5.8682053E-4	46.66683	48
GGACGCT	30	5.8682053E-4	46.66683	13
CGGTGGA	30	5.875133E-4	46.655663	46
TCGCCGT	70	3.8016879E-10	45.010925	52
CCTGACG	70	3.8198777E-10	45.000153	11
CTCGGTG	125	0.0	44.800156	44
AGTGTCG	40	4.5817545E-5	43.750153	35
CGGTGGT	100	0.0	41.9901	46
TAAACGT	35	0.0012533914	40.000137	4
GGCTTAT	35	0.0012533914	40.000137	1
CTAAACG	35	0.0012533914	40.000137	3
GGTGGAC	35	0.0012548675	39.99057	47
GATATGC	35	0.0012548675	39.99057	26
TGGTCGC	80	1.4097168E-9	39.38456	49