##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779868_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 113186 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.29469192302935 34.0 23.0 34.0 12.0 34.0 2 29.03133779796088 34.0 23.0 34.0 12.0 34.0 3 28.7078437262559 34.0 23.0 34.0 11.0 34.0 4 28.86017705369922 34.0 23.0 34.0 12.0 34.0 5 29.103546374993375 34.0 27.0 34.0 11.0 34.0 6 31.638055943314544 37.0 27.0 38.0 12.0 38.0 7 31.953943067163785 37.0 28.0 38.0 12.0 38.0 8 31.30033749757037 37.0 27.0 38.0 11.0 38.0 9 32.125660417366106 37.0 31.0 38.0 12.0 38.0 10-11 30.78242450479741 36.5 25.5 38.0 11.0 38.0 12-13 31.547991801106143 37.0 27.0 38.0 11.0 38.0 14-15 30.39620182708109 36.5 24.5 38.0 11.0 38.0 16-17 30.93060537522308 37.0 25.5 38.0 11.0 38.0 18-19 31.686776633152512 37.0 28.0 38.0 11.0 38.0 20-21 30.597286766914635 36.5 25.0 38.0 11.0 38.0 22-23 31.385038785715548 37.0 28.0 38.0 11.0 38.0 24-25 31.71797307087449 37.0 29.0 38.0 11.0 38.0 26-27 30.642751753750467 37.0 24.5 38.0 11.0 38.0 28-29 31.709345678794197 37.0 29.0 38.0 11.0 38.0 30-31 32.05852313890411 38.0 31.0 38.0 11.0 38.0 32-33 32.19816054989133 38.0 31.0 38.0 11.0 38.0 34-35 32.154944074355484 38.0 31.0 38.0 11.0 38.0 36-37 31.70544943720955 37.0 27.0 38.0 11.0 38.0 38-39 31.619869065078717 37.0 28.0 38.0 11.0 38.0 40-41 31.630426907921475 37.0 27.0 38.0 11.0 38.0 42-43 31.932725778806564 37.5 29.0 38.0 11.0 38.0 44-45 32.012625236336646 37.0 30.5 38.0 11.0 38.0 46-47 31.904983831922678 37.0 29.0 38.0 11.0 38.0 48-49 31.624454437828 37.0 27.0 38.0 11.0 38.0 50-51 31.054388351916316 37.0 25.5 38.0 11.0 38.0 52-53 31.581525100277418 37.0 27.0 38.0 11.0 38.0 54-55 31.706200413478697 37.0 28.0 38.0 11.0 38.0 56-57 31.735841888572793 37.0 27.0 38.0 11.0 38.0 58-59 31.90930415422402 37.0 29.0 38.0 11.0 38.0 60-61 31.838018836251834 37.0 27.5 38.0 11.0 38.0 62-63 31.82787182160338 37.0 27.0 38.0 11.0 38.0 64-65 31.8228623681374 37.0 29.0 38.0 11.0 38.0 66-67 31.714023819200257 37.0 27.0 38.0 11.0 38.0 68-69 31.142274662944182 37.0 25.5 38.0 11.0 38.0 70-71 31.177822345519765 37.0 25.5 38.0 11.0 38.0 72-73 31.287009877546694 37.0 26.0 38.0 11.0 38.0 74-75 31.355445903203574 37.0 26.0 38.0 11.0 38.0 76 30.502623999434558 36.0 25.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 31.0 13 432.0 14 1366.0 15 2355.0 16 3202.0 17 3612.0 18 3801.0 19 3363.0 20 2648.0 21 2042.0 22 1604.0 23 1319.0 24 1227.0 25 1200.0 26 1281.0 27 1407.0 28 1571.0 29 1820.0 30 2183.0 31 2727.0 32 3553.0 33 4655.0 34 6275.0 35 9470.0 36 16748.0 37 33293.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.4272209215002 18.483014533727967 9.567522198171135 34.5222423466007 2 19.736539854752355 20.894810312229428 32.4642623646034 26.90438746841482 3 17.39791140247027 20.404466983549202 34.55374339582634 27.64387821815419 4 12.820490166628382 25.4413089958122 29.12020921315357 32.617991624405846 5 17.046277808209496 32.1214637852738 32.47574788401392 18.356510522502784 6 26.477240599378003 36.8903731976251 16.1939850155499 20.43840118744699 7 25.614087792464836 31.801795433660846 17.409168021488654 25.174948752385667 8 22.48080508212509 39.53490426838427 16.130799339111686 21.85349131037895 9 22.810412469515427 19.15138020004948 17.78443431237409 40.253773018061004 10-11 22.266251408124045 27.360236785722176 23.28098425109889 27.09252755505489 12-13 22.637075256657184 23.378774760129346 25.068913116463165 28.915236866750305 14-15 24.958254185625304 25.30061403896276 21.29036533109511 28.450766444316827 16-17 25.702055475303816 26.093890118433897 21.757645634820715 26.446408771441572 18-19 22.069276270160668 25.873242360923975 24.464038803899825 27.59344256501553 20-21 24.95405792235789 24.79370240135706 23.687558531973917 26.564681144311137 22-23 25.740387333898784 24.69341956460277 22.675908255583828 26.890284845914618 24-25 21.919369516623522 28.289142362368906 22.38366185734607 27.407826263661505 26-27 23.930291116314 27.982506515881077 23.276935989751294 24.81026637805363 28-29 22.57770944883281 27.21244411458057 24.66247857357437 25.547367863012244 30-31 23.240167689324164 26.562589731016782 24.286679830897068 25.91056274876199 32-33 21.550021866758552 27.41075491118562 25.164884194530217 25.87433902752561 34-35 21.706190030216817 28.727182767577887 24.117792581859305 25.448834620345988 36-37 24.001131086771142 25.604534951023062 24.588324180072547 25.80600978213325 38-39 24.118826928684403 24.854868210615606 26.015922525690755 25.010382335009236 40-41 22.237045544904362 27.026549454433006 24.884481159164203 25.85192384149843 42-43 20.393603392675708 26.230949330741705 25.86561823563193 27.509829040950656 44-45 19.84591189411744 24.71550246505628 27.900196144263223 27.53838949656306 46-47 21.227569511322372 24.937048850092328 26.454944647164325 27.380436991420975 48-49 21.184250632810738 26.079754032097753 26.339504618524458 26.39649071656705 50-51 23.889841140817445 25.44618402219434 24.693414147125868 25.970560689862342 52-53 18.70482619682966 27.24433173697139 26.111120928835245 27.939721137363705 54-55 19.506699712396124 25.63252972127606 25.848563968668408 29.012206597659407 56-57 20.369871304931763 26.262099677930983 25.127126693734013 28.24090232340324 58-59 19.508153986859952 26.417503567783466 25.905421705378405 28.168920739978176 60-61 18.608740991458735 25.86815604936526 25.71924723723339 29.803855721942618 62-63 19.904570456603857 26.07656453643774 25.04716251739601 28.971702489562396 64-65 20.50043742985658 25.5419269889803 24.470886612878996 29.486748968284125 66-67 19.315927377485963 28.563412144697132 23.094631077098455 29.02602940071845 68-69 20.16910293279616 29.642931294202878 21.87515185248994 28.312813920511022 70-71 20.832615485199078 29.5965472609124 21.607007964801145 27.963829289087382 72-73 21.7162547213571 27.701720672365425 21.87440637907804 28.707618227199433 74-75 21.34626939525678 27.482946311808576 22.953999222422507 28.21678507051214 76 20.74446466752664 28.671520206393243 22.039723630966055 28.544291495114066 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.5 14 3.5 15 8.0 16 13.0 17 14.0 18 33.0 19 58.5 20 69.0 21 73.0 22 108.0 23 160.5 24 237.5 25 297.0 26 309.0 27 437.5 28 672.0 29 790.0 30 876.5 31 1061.0 32 1360.0 33 1561.0 34 1668.0 35 2062.0 36 2631.0 37 2913.0 38 3235.5 39 3867.5 40 4458.0 41 4936.5 42 5134.0 43 5397.5 44 5856.0 45 6176.5 46 6302.0 47 6361.5 48 6341.0 49 6117.0 50 5973.0 51 5817.0 52 5392.0 53 4919.5 54 4716.0 55 4397.5 56 3791.0 57 3322.0 58 3141.0 59 2902.0 60 2528.0 61 2206.0 62 2019.0 63 1865.0 64 1582.5 65 1388.5 66 1209.0 67 1095.0 68 1007.0 69 905.5 70 835.5 71 779.0 72 702.0 73 602.0 74 570.0 75 561.0 76 536.0 77 435.5 78 341.0 79 322.0 80 303.5 81 284.0 82 225.5 83 168.0 84 149.0 85 114.5 86 88.0 87 77.0 88 71.5 89 57.0 90 41.5 91 28.0 92 21.0 93 14.5 94 6.5 95 10.0 96 15.0 97 9.5 98 4.0 99 5.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.835014931175235E-4 2 0.0 3 0.0 4 0.0 5 0.0 6 0.001767002986235047 7 0.008835014931175235 8 0.004417507465587617 9 0.012369020903645327 10-11 0.0030922552259113317 12-13 0.0 14-15 8.835014931175235E-4 16-17 4.4175074655876173E-4 18-19 0.001325252239676285 20-21 0.0 22-23 0.001767002986235047 24-25 0.00265050447935257 26-27 8.835014931175235E-4 28-29 0.007068011944940188 30-31 4.4175074655876173E-4 32-33 4.4175074655876173E-4 34-35 0.003534005972470094 36-37 0.01811178060890923 38-39 0.011485519410527802 40-41 8.835014931175235E-4 42-43 8.835014931175235E-4 44-45 0.003534005972470094 46-47 0.00265050447935257 48-49 4.4175074655876173E-4 50-51 0.003534005972470094 52-53 0.01060201791741028 54-55 0.00839326418461647 56-57 0.01016026717085152 58-59 0.01811178060890923 60-61 0.026063294046966938 62-63 0.011927270157086566 64-65 0.022087537327938084 66-67 0.022529288074496844 68-69 4.4175074655876173E-4 70-71 4.4175074655876173E-4 72-73 0.0030922552259113317 74-75 0.012369020903645327 76 0.003534005972470094 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 113186.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 73.66016998568728 #Duplication Level Percentage of deduplicated Percentage of total 1 82.06613651901695 60.450055660594074 2 9.106065512815901 13.415086671496477 3 4.617801926283089 10.204442245507394 4 2.1637700454583615 6.375346774336049 5 0.9703381190553296 3.573763539660382 6 0.5181533590011155 2.2900358701606205 7 0.19910522591246568 1.0266287350025622 8 0.12713948160675517 0.7492092661636598 9 0.08635889316685258 0.5725089675401551 >10 0.14513091768318281 1.3429222695386356 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0035340059724700934 0.0 6 0.0 0.0 0.0 0.0035340059724700934 0.0 7 0.0 0.0 0.0 0.0035340059724700934 0.0 8 0.0 0.0 0.0 0.004417507465587617 0.0 9 0.0 0.0 0.0 0.004417507465587617 0.0 10 0.0 0.0 0.0 0.004417507465587617 0.0 11 0.0 0.0 0.0 0.004417507465587617 0.0 12 0.0 0.0 0.0 0.004417507465587617 0.0 13 0.0 0.0 0.0 0.00530100895870514 0.0 14 0.0 0.0 0.0 0.007068011944940187 0.0 15 0.0 0.0 0.0 0.007068011944940187 0.0 16 0.0 0.0 0.0 0.008835014931175235 0.0 17 0.0 0.0 0.0 0.009718516424292757 0.0 18 0.0 0.0 0.0 0.013252522396762851 0.0 19 0.0 0.0 0.0 0.015019525382997898 0.0 20 0.0 0.0 0.0 0.015019525382997898 0.0 21 0.0 0.0 0.0 0.01767002986235047 0.0 22 0.0 0.0 0.0 0.03799056420405351 0.0 23 0.0 0.0 0.0 0.03887406569717103 0.0 24 0.0 0.0 0.0 0.04064106868340608 0.0 25 0.0 0.0 0.0 0.04240807166964112 0.0 26 0.0 0.0 0.0 0.04329157316275865 0.0 27 0.0 0.0 0.0 0.06361210750446168 0.0 28 0.0 0.0 0.0 0.09718516424292757 0.0 29 0.0 0.0 0.0 0.13340872546074603 0.0 30 0.0 0.0 0.0 0.18376831056844486 0.0 31 0.0 0.0 0.0 0.23589489866237873 0.0 32 0.0 0.0 0.0 0.28625448377007756 0.0 33 0.0 0.0 0.0 0.32954605693283623 0.0 34 0.0 0.0 0.0 0.3931581644372979 0.0 35 0.0 0.0 0.0 0.5053628540632233 0.0 36 0.0 0.0 0.0 0.6785291467142579 0.0 37 0.0 0.0 0.0 0.9974731857296839 0.0 38 0.0 0.0 0.0 1.3632428038803386 0.0 39 0.0 0.0 0.0 1.7837895146042797 0.0 40 0.0 0.0 0.0 2.275016344777623 0.0 41 0.0 0.0 0.0 2.8616613362076584 0.0 42 0.0 0.0 0.0 3.616171611330023 0.0 43 0.0 0.0 0.0 4.445779513367378 0.0 44 0.0 0.0 0.0 5.151697206368278 0.0 45 0.0 0.0 0.0 5.758662732140017 0.0 46 0.0 0.0 0.0 6.510522502783029 0.0 47 0.0 0.0 0.0 7.231459721166929 0.0 48 0.0 0.0 0.0 7.8896683335394835 0.0 49 0.0 0.0 0.0 8.466594808545226 0.0 50 0.0 0.0 0.0 9.18223101797042 0.0 51 0.0 0.0 0.0 9.893449719930027 0.0 52 0.0 0.0 0.0 10.65591150849045 0.0 53 0.0 0.0 0.0 11.463431873199866 0.0 54 0.0 0.0 0.0 12.223243157280935 0.0 55 0.0 0.0 0.0 12.920325835350662 0.0 56 0.0 0.0 0.0 13.604155991023624 0.0 57 0.0 0.0 0.0 14.26589860936865 0.0 58 0.0 0.0 0.0 14.831339564963864 0.0 59 0.0 0.0 0.0 15.353488947396322 0.0 60 0.0 0.0 0.0 15.78905518350326 0.0 61 0.0 0.0 0.0 16.30325305249766 0.0 62 0.0 0.0 0.0 16.8298199423957 0.0 63 0.0 0.0 0.0 17.381124874101037 0.0 64 0.0 0.0 0.0 17.943031823723782 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTCGC 65 0.0 64.61539 49 ACGATAT 70 0.0 55.000004 24 CGGTGGT 85 0.0 53.52941 46 GTGGTCG 105 0.0 53.333332 48 AGATCCC 20 0.006935931 52.5 40 GCGAACT 20 0.006935931 52.5 28 TCCGAAA 20 0.006935931 52.5 20 GATCCCG 20 0.006935931 52.5 41 CGAGACG 20 0.006935931 52.5 69 GCCGTCT 20 0.006935931 52.5 55 CGATATG 70 7.2759576E-12 50.000004 25 ATCTCGG 105 0.0 49.999996 42 ATATGCA 80 0.0 48.125 27 GGTGGTC 125 0.0 47.600002 47 AGATCTC 140 0.0 47.500004 40 TCTCGGG 30 5.856837E-4 46.666664 45 TCTCGGC 60 4.8730726E-9 46.666664 43 GACGCTT 30 5.856837E-4 46.666664 14 TGTAGAT 160 0.0 45.9375 37 TCGGTGG 85 1.8189894E-12 45.294117 45 >>END_MODULE