##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779854_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 186078 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.173008093380194 34.0 23.0 34.0 12.0 34.0 2 28.754328829845548 34.0 23.0 34.0 12.0 34.0 3 28.506180204000472 34.0 23.0 34.0 11.0 34.0 4 28.81079439804813 34.0 23.0 34.0 12.0 34.0 5 29.224959425617214 34.0 27.0 34.0 11.0 34.0 6 31.815174281752814 37.0 27.0 38.0 12.0 38.0 7 31.69664334311418 37.0 27.0 38.0 12.0 38.0 8 31.176968798030934 37.0 27.0 38.0 11.0 38.0 9 32.08814583131805 37.0 31.0 38.0 12.0 38.0 10-11 30.70457012650609 36.5 25.5 38.0 11.0 38.0 12-13 31.483007126043915 37.0 27.0 38.0 11.0 38.0 14-15 30.364290781285266 36.5 24.5 38.0 11.0 38.0 16-17 30.926039080385646 36.5 25.0 38.0 11.0 38.0 18-19 31.65516880018057 37.0 27.5 38.0 11.0 38.0 20-21 30.534034114726083 36.5 25.0 38.0 11.0 38.0 22-23 31.33985479207644 37.0 27.0 38.0 11.0 38.0 24-25 31.666846698696247 37.0 27.5 38.0 11.0 38.0 26-27 30.630015369898643 37.0 24.5 38.0 11.0 38.0 28-29 31.69310987865304 37.0 29.0 38.0 11.0 38.0 30-31 32.02715796601426 38.0 31.0 38.0 11.0 38.0 32-33 32.15919668096174 38.0 31.0 38.0 11.0 38.0 34-35 32.10762153505519 38.0 31.0 38.0 11.0 38.0 36-37 31.634989090596417 37.0 26.5 38.0 11.0 38.0 38-39 31.54784821418975 37.0 26.5 38.0 11.0 38.0 40-41 31.54737529423145 37.0 27.0 38.0 11.0 38.0 42-43 31.90521716699449 37.5 29.0 38.0 11.0 38.0 44-45 31.979994948354992 37.0 28.5 38.0 11.0 38.0 46-47 31.8887428927654 37.0 28.5 38.0 11.0 38.0 48-49 31.60266124958351 37.0 27.0 38.0 11.0 38.0 50-51 30.997455368178933 37.0 25.5 38.0 11.0 38.0 52-53 31.561049667343802 37.0 27.0 38.0 11.0 38.0 54-55 31.66841862014854 37.0 28.5 38.0 11.0 38.0 56-57 31.744840873182213 37.0 27.0 38.0 11.0 38.0 58-59 31.959705069916918 37.5 30.5 38.0 11.0 38.0 60-61 31.869146271993465 37.0 27.5 38.0 11.0 38.0 62-63 31.853897290383603 37.0 27.5 38.0 11.0 38.0 64-65 31.858142821827407 37.0 29.0 38.0 11.0 38.0 66-67 31.7849074044218 37.0 27.0 38.0 11.0 38.0 68-69 31.220294715119465 37.0 26.0 38.0 11.0 38.0 70-71 31.281892539687657 37.0 26.0 38.0 11.0 38.0 72-73 31.460341899633487 37.0 27.0 38.0 11.0 38.0 74-75 31.547931512591497 37.0 27.0 38.0 11.0 38.0 76 30.508603918786747 36.0 25.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 35.0 13 563.0 14 2016.0 15 3880.0 16 5214.0 17 6413.0 18 6486.0 19 5705.0 20 4557.0 21 3275.0 22 2434.0 23 2015.0 24 1833.0 25 1860.0 26 1964.0 27 2209.0 28 2581.0 29 3086.0 30 3653.0 31 4643.0 32 5969.0 33 7785.0 34 10771.0 35 15713.0 36 27555.0 37 53858.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.7560915315083 24.36988789647352 9.484194800030094 29.389825771988093 2 18.457851008716773 26.868302539795142 29.769773965756297 24.904072485731792 3 16.443641913606122 22.87051666505444 33.49079418308451 27.195047238254926 4 12.429196358516322 23.151581594815077 30.808048237835745 33.61117380883286 5 12.375992863207902 34.34903642558497 35.329807930007846 17.94516278119928 6 24.88526070273117 42.119801799284154 16.48215226200329 16.512785235981383 7 24.921803622292686 28.971354866448113 19.029934970709945 27.076906540549256 8 22.349950556773724 37.33178554538028 18.349348639236425 21.96891525860957 9 22.516392561539288 19.138449962377727 19.064280339675374 39.28087713640761 10-11 21.720390812257488 27.642497071057754 24.522501800359 26.114610316325766 12-13 21.678870363155138 23.85162096438312 25.970630516854538 28.498878155607205 14-15 24.54790221252492 25.67136185557592 22.091123567125436 27.689612364773726 16-17 25.06153333548297 26.600404131600726 22.59106396242436 25.746998570491947 18-19 21.237152185304115 26.584261510970187 25.167071974633544 27.011514329092158 20-21 23.832478852954136 26.018658841990995 24.463397070045893 25.685465235008976 22-23 25.145169568266645 25.600629851861207 23.34375025191387 25.910450327958273 24-25 21.04572985580773 29.091852034975897 23.420092330347018 26.442325778869357 26-27 22.80232698741116 28.940360871142403 24.435517459123215 23.821794682323226 28-29 21.412159892509237 28.47725898555593 26.101713134027545 24.00886798790729 30-31 22.336063371274413 27.332623953395892 25.543857952041616 24.787454723288082 32-33 20.61022960863081 28.54025876314976 25.221749002431782 25.627762625787643 34-35 20.819673893182284 29.299902189451508 25.226791491557123 24.653632425809086 36-37 23.441132441592018 26.464936398257365 25.032721369809263 25.061209790341348 38-39 23.14164631016589 25.948290457033675 26.578468599929593 24.331594632870846 40-41 21.51689891818978 27.4762598279207 25.95672759126598 25.050113662623534 42-43 19.675994346426478 27.10786394879539 26.701043116559276 26.515098588218855 44-45 19.130217472503556 25.620534262735163 28.232998960066 27.01624930469529 46-47 20.176650149940343 26.341401807882885 27.440426926921546 26.04152111525522 48-49 20.489312248928538 26.651260899356448 27.442866547540675 25.416560304174336 50-51 23.136369743383046 26.36974338304447 25.167808679295984 25.3260781942765 52-53 18.35937814922806 27.815057173185707 26.611128280235945 27.214436397350283 54-55 18.552218591452405 26.479329693008857 26.67657365207671 28.291878063462033 56-57 19.634660245315676 27.101899530223704 26.026627823226512 27.2368124012341 58-59 19.117453406968462 27.408661533706884 25.79110734873221 27.682777710592436 60-61 18.009928319361833 26.473188968653496 26.629343639720805 28.88753907226387 62-63 18.856064860971895 26.563545532477512 26.24106804543708 28.33932156111352 64-65 19.815943170303633 26.017110189512955 25.432525486549178 28.734421153634237 66-67 18.848650174019376 28.91946732601422 23.636534662778665 28.59534783718774 68-69 19.029538926194334 30.0838633572751 23.051809336482577 27.834788380047993 70-71 18.87449516731022 29.855193965922616 23.857660693316994 27.412650173450164 72-73 18.719080773581915 28.52966230360161 23.772031418367867 28.979225504448607 74-75 18.180547829615477 27.70266820379283 23.636808259634584 30.479975706957106 76 18.013360347820477 27.044762002009964 24.32969855916764 30.612179091001916 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 0.5 12 0.0 13 3.5 14 5.5 15 6.0 16 14.5 17 21.0 18 30.5 19 38.0 20 56.0 21 76.0 22 85.0 23 133.0 24 235.5 25 299.0 26 404.5 27 562.5 28 745.0 29 875.0 30 1056.5 31 1419.5 32 2010.0 33 2419.0 34 2741.0 35 3537.5 36 4508.5 37 5005.0 38 5720.5 39 7333.0 40 8756.5 41 9821.0 42 10359.0 43 10926.0 44 12030.0 45 12603.5 46 12640.0 47 12753.5 48 12284.5 49 11462.0 50 11222.0 51 10583.0 52 9145.0 53 7774.5 54 7203.0 55 6664.5 56 5602.5 57 4548.5 58 4018.0 59 3592.0 60 2787.0 61 2264.0 62 2120.0 63 1914.0 64 1519.5 65 1236.5 66 1079.5 67 1017.0 68 933.0 69 814.0 70 719.5 71 660.0 72 602.0 73 528.5 74 466.5 75 420.0 76 384.0 77 332.0 78 279.0 79 242.0 80 228.0 81 171.5 82 128.0 83 127.0 84 120.5 85 88.5 86 61.5 87 60.0 88 58.5 89 46.0 90 28.0 91 19.5 92 18.0 93 18.5 94 16.5 95 12.0 96 10.0 97 9.5 98 8.0 99 7.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0021496361740775374 7 0.004299272348155075 8 0.003224454261116306 9 0.009673362783348918 10-11 0.0021496361740775374 12-13 2.687045217596922E-4 14-15 5.374090435193844E-4 16-17 0.0 18-19 0.002955749739356614 20-21 0.0 22-23 0.0013435226087984609 24-25 0.00376186330463569 26-27 2.687045217596922E-4 28-29 0.008329840174550457 30-31 0.0 32-33 2.687045217596922E-4 34-35 0.0021496361740775374 36-37 0.02015283913197691 38-39 0.010479476348627994 40-41 5.374090435193844E-4 42-43 5.374090435193844E-4 44-45 0.0045679768699147675 46-47 0.0021496361740775374 48-49 2.687045217596922E-4 50-51 0.001612227130558153 52-53 0.01101688539214738 54-55 0.00752372660927138 56-57 0.0171970893926203 58-59 0.0137039306097443 60-61 0.023914702436612603 62-63 0.00994206730510861 64-65 0.02606433861069014 66-67 0.019078021044938144 68-69 8.061135652790765E-4 70-71 8.061135652790765E-4 72-73 0.0045679768699147675 74-75 0.00886724921806984 76 0.0026870452175969217 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 186078.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.638302360594906 #Duplication Level Percentage of deduplicated Percentage of total 1 79.59982464097017 47.47198409788513 2 7.4459951501963495 8.881330202858665 3 4.430748501802556 7.927269565027613 4 2.8620457354920714 6.827501957725096 5 1.6863223258260205 5.028470037251692 6 1.0977383672227903 3.9280351594355127 7 0.7028853199181883 2.9343221063873077 8 0.4496440371916605 2.1452805635739867 9 0.3439622750880684 1.8461993546106312 >10 1.3788396627089197 12.941823811617633 >50 0.0019939835831906355 0.06778314362673978 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0021496361740775374 0.0 6 0.0 0.0 0.0 0.0021496361740775374 0.0 7 0.0 0.0 0.0 0.003224454261116306 0.0 8 5.374090435193844E-4 0.0 0.0 0.003224454261116306 0.0 9 5.374090435193844E-4 0.0 0.0 0.005374090435193843 0.0 10 5.374090435193844E-4 0.0 0.0 0.005911499478713228 0.0 11 5.374090435193844E-4 0.0 0.0 0.006448908522232612 0.0 12 5.374090435193844E-4 0.0 0.0 0.008061135652790765 0.0 13 5.374090435193844E-4 0.0 0.0 0.008061135652790765 0.0 14 5.374090435193844E-4 0.0 0.0 0.009673362783348918 0.0 15 5.374090435193844E-4 0.0 0.0 0.010748180870387687 0.0 16 5.374090435193844E-4 0.0 0.0 0.010748180870387687 0.0 17 5.374090435193844E-4 0.0 0.0 0.010748180870387687 0.0 18 5.374090435193844E-4 0.0 0.0 0.010748180870387687 0.0 19 5.374090435193844E-4 0.0 0.0 0.010748180870387687 0.0 20 5.374090435193844E-4 0.0 0.0 0.011822998957426455 0.0 21 5.374090435193844E-4 0.0 0.0 0.01880931652317845 0.0 22 5.374090435193844E-4 0.0 0.0 0.03815604208987629 0.0 23 5.374090435193844E-4 0.0 0.0 0.04406754156858952 0.0 24 5.374090435193844E-4 0.0 0.0 0.04406754156858952 0.0 25 5.374090435193844E-4 0.0 0.0 0.047829404873225206 0.0 26 5.374090435193844E-4 0.0 0.0 0.05105385913434151 0.0 27 5.374090435193844E-4 0.0 0.0 0.06663872139640366 0.0 28 5.374090435193844E-4 0.0 0.0 0.08061135652790766 0.0 29 5.374090435193844E-4 0.0 0.0 0.10801921774739626 0.0 30 5.374090435193844E-4 0.0 0.0 0.157998258794699 0.0 31 5.374090435193844E-4 0.0 0.0 0.19078021044938145 0.0 32 5.374090435193844E-4 0.0 0.0 0.24452111480131988 0.0 33 5.374090435193844E-4 0.0 0.0 0.2907382925439869 0.0 34 5.374090435193844E-4 0.0 0.0 0.33749287933017336 0.0 35 5.374090435193844E-4 0.0 0.0 0.41649200872752284 0.0 36 5.374090435193844E-4 0.0 0.0 0.5529939057814465 0.0 37 5.374090435193844E-4 0.0 0.0 0.8265351089328131 0.0 38 5.374090435193844E-4 0.0 0.0 1.2226055740065993 0.0 39 5.374090435193844E-4 0.0 0.0 1.7342189834370534 0.0 40 5.374090435193844E-4 0.0 0.0 2.2839884349573834 0.0 41 5.374090435193844E-4 0.0 0.0 2.9750964649233116 0.0 42 5.374090435193844E-4 0.0 0.0 3.677490084803147 0.0 43 5.374090435193844E-4 0.0 0.0 4.362686615290362 0.0 44 5.374090435193844E-4 0.0 0.0 5.07152914369243 0.0 45 5.374090435193844E-4 0.0 0.0 5.762099764614839 0.0 46 5.374090435193844E-4 0.0 0.0 6.53811842345683 0.0 47 5.374090435193844E-4 0.0 0.0 7.271681767860789 0.0 48 5.374090435193844E-4 0.0 0.0 7.9751502058276635 0.0 49 5.374090435193844E-4 0.0 0.0 8.657659691097281 0.0 50 5.374090435193844E-4 0.0 0.0 9.30470017949462 0.0 51 5.374090435193844E-4 0.0 0.0 9.963026257805867 0.0 52 5.374090435193844E-4 0.0 0.0 10.713786691602447 0.0 53 5.374090435193844E-4 0.0 0.0 11.505927621750018 0.0 54 5.374090435193844E-4 0.0 0.0 12.258300282677157 0.0 55 5.374090435193844E-4 0.0 0.0 12.983265082384806 0.0 56 5.374090435193844E-4 0.0 0.0 13.567428712690377 0.0 57 5.374090435193844E-4 0.0 0.0 14.225217381958103 0.0 58 5.374090435193844E-4 0.0 0.0 14.783585378174743 0.0 59 5.374090435193844E-4 0.0 0.0 15.380109416481261 0.0 60 5.374090435193844E-4 0.0 0.0 15.908919915304335 0.0 61 5.374090435193844E-4 0.0 0.0 16.46191382108578 0.0 62 5.374090435193844E-4 0.0 0.0 16.964928685819924 0.0 63 5.374090435193844E-4 0.0 0.0 17.550704543256053 0.0 64 5.374090435193844E-4 0.0 0.0 18.096712131471747 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCTC 15 0.0022186167 70.02662 56 ACGTGTA 15 0.0022209845 70.00779 34 GACGAAT 95 0.0 55.269314 23 GGTCCTC 20 0.00693249 52.519966 56 TAACGTG 20 0.0069398675 52.505848 32 ACGATAT 40 7.4444506E-7 52.505848 24 TGTCCGT 20 0.0069398675 52.505848 35 CAGTCGA 20 0.00694725 52.491737 9 CGGACTT 20 0.00694725 52.491737 39 GCCTTAA 35 2.075993E-5 50.019016 60 TCTACGT 35 2.079299E-5 50.00557 68 CGTATCA 50 6.145456E-8 49.018635 56 GTGTCTA 30 5.863413E-4 46.671864 65 GTGTCGA 30 5.863413E-4 46.671864 36 GATATGC 45 1.676839E-6 46.671864 26 GACGATC 45 1.676839E-6 46.671864 23 AGATCTC 135 0.0 46.65932 40 CGTGCGA 30 5.87119E-4 46.65932 10 ATCTCGG 85 1.8189894E-12 45.286987 42 ATGCAGT 40 4.5768844E-5 43.754875 29 >>END_MODULE