SRR1779852_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779852_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	286568
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTCGC	25	2.8323993E-6	70.01309	36
CGGTGGT	85	0.0	53.53008	46
AAGTCGA	20	0.0069463956	52.500652	31
GTCATCG	20	0.006951192	52.491493	4
AACGCGA	20	0.006951192	52.491493	9
CCGTACC	30	5.866564E-4	46.675392	55
GACGAAT	60	4.9258233E-9	46.659107	23
GTAGATC	130	0.0	45.769802	38
CGACGAG	55	1.3096724E-7	44.538235	22
CTCGGTG	90	1.8189894E-12	42.778313	44
CGACGAA	270	0.0	42.770847	22
TCGGTGG	90	1.8189894E-12	42.770844	45
TGGTCGC	80	1.4169927E-9	39.37549	49
ACGAAGG	45	9.1933856E-5	38.882587	24
CTTCCGA	55	6.6890625E-6	38.17563	18
TCGCCGT	90	4.476533E-9	35.006546	52
CGTATCA	80	6.21294E-8	35.006546	56
ACTCGGT	40	0.0024162654	35.000435	43
TAGATCT	170	0.0	35.000435	39
CTCTCGG	50	1.7071608E-4	35.000435	42