##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779850_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 90503 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.957846701214326 27.0 12.0 34.0 12.0 34.0 2 25.163740428494084 31.0 12.0 34.0 12.0 34.0 3 25.13649271294874 31.0 11.0 34.0 11.0 34.0 4 25.814149807188713 31.0 21.0 34.0 12.0 34.0 5 24.851662375832845 31.0 11.0 34.0 11.0 34.0 6 27.863606731268575 34.0 21.0 38.0 11.0 38.0 7 28.040109167651902 34.0 21.0 38.0 11.0 38.0 8 27.71448460272035 34.0 21.0 38.0 11.0 38.0 9 28.121885462360364 34.0 12.0 38.0 11.0 38.0 10-11 27.060174800835334 31.5 11.5 37.5 11.0 38.0 12-13 27.4311404041855 33.5 11.0 38.0 11.0 38.0 14-15 26.55329657580412 29.5 11.0 37.5 11.0 38.0 16-17 26.827729467531462 30.5 11.0 37.5 11.0 38.0 18-19 27.108007469365656 32.5 11.0 38.0 11.0 38.0 20-21 26.63898434306045 29.0 11.0 37.5 11.0 38.0 22-23 27.103189949504436 32.5 11.0 38.0 11.0 38.0 24-25 27.414605040716882 33.0 11.0 38.0 11.0 38.0 26-27 26.52487762836591 31.0 11.0 38.0 11.0 38.0 28-29 27.03935228666453 32.0 11.0 38.0 11.0 38.0 30-31 27.239030750361863 34.0 11.0 38.0 11.0 38.0 32-33 27.42048329889617 34.0 11.0 38.0 11.0 38.0 34-35 27.503696010077014 34.0 11.0 38.0 11.0 38.0 36-37 27.123272156724084 32.5 11.0 38.0 11.0 38.0 38-39 26.99661889661116 32.5 11.0 38.0 11.0 38.0 40-41 27.028606786515365 32.0 11.0 38.0 11.0 38.0 42-43 27.311934411014 33.5 11.0 38.0 11.0 38.0 44-45 27.40493132824326 34.0 11.0 38.0 11.0 38.0 46-47 27.283250278996277 34.0 11.0 38.0 11.0 38.0 48-49 26.9809619570622 32.5 11.0 38.0 11.0 38.0 50-51 26.537446272499253 29.5 11.0 38.0 11.0 38.0 52-53 27.022264455321924 32.0 11.0 38.0 11.0 38.0 54-55 27.04825254411456 33.0 11.0 38.0 11.0 38.0 56-57 27.07149486757345 33.0 11.0 38.0 11.0 38.0 58-59 27.09233948045921 33.5 11.0 38.0 11.0 38.0 60-61 27.22196501773422 33.5 11.0 38.0 11.0 38.0 62-63 27.054395986873363 33.0 11.0 38.0 11.0 38.0 64-65 27.02665105024143 33.0 11.0 38.0 11.0 38.0 66-67 27.219871164491785 32.5 11.0 38.0 11.0 38.0 68-69 26.82401688341823 31.0 11.0 38.0 11.0 38.0 70-71 26.83917107720186 31.0 11.0 38.0 11.0 38.0 72-73 26.680419433609934 31.0 11.0 38.0 11.0 38.0 74-75 26.932919350739756 31.0 11.0 38.0 11.0 38.0 76 26.006563318343037 28.0 11.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 68.0 13 726.0 14 2533.0 15 4221.0 16 5565.0 17 6504.0 18 6446.0 19 5672.0 20 4342.0 21 3067.0 22 2228.0 23 1548.0 24 1263.0 25 1061.0 26 934.0 27 996.0 28 1018.0 29 1185.0 30 1292.0 31 1482.0 32 1965.0 33 2444.0 34 3383.0 35 4920.0 36 8645.0 37 16992.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.292984762936037 20.104305934609904 16.90662187993768 34.69608742251638 2 21.73850590588157 21.26669834149144 32.35030882954156 24.644486923085424 3 13.974122404782163 28.880810580864726 31.971315867982277 25.173751146370837 4 11.153221440173255 29.748185143033933 23.802525883119895 35.29606753367291 5 20.162867529253173 30.711689115277945 30.075246124437864 19.050197231031017 6 21.103634213986584 45.75640048176263 13.297090639882434 19.84287466436835 7 18.917754179696562 36.487397372288584 15.021492425163267 29.573356022851588 8 16.827438370846732 46.62158429188628 13.730235025027348 22.820742312239645 9 19.432012818387754 22.909553013978673 14.775401955909167 42.883032211724405 10-11 18.37393163573682 32.516394937044545 21.681648167689684 27.428025259528955 12-13 17.818746339900336 25.308000839751166 24.431786791598068 32.441466028750426 14-15 25.530233971437255 27.814701251346648 19.08676555896246 27.56829921825364 16-17 27.151033667392245 25.96378020618101 18.541926786957337 28.343259339469412 18-19 20.523416738949077 25.80288724496279 22.669790003480607 31.003906012607523 20-21 25.259383666839774 24.85442471520281 20.435234191131784 29.45095742682563 22-23 27.138121546961326 24.419337016574584 18.927624309392264 29.514917127071822 24-25 19.70497237569061 31.1475138121547 18.733149171270718 30.414364640883978 26-27 23.918676279660783 30.863235822214858 19.87403662882241 25.344051269301954 28-29 20.696151827398545 29.339484516146857 23.096218127572584 26.868145528882014 30-31 22.246346786000387 27.484876108394797 23.379464655672493 26.889312449932323 32-33 18.51761820050164 30.31667458537286 23.113045976376473 28.052661237749028 34-35 18.766505707245386 32.40533044564028 21.677587597653012 27.150576249461324 36-37 23.58015140631044 26.582859037409516 22.24733381223407 27.589655744045977 38-39 24.52581039045709 23.982142955804918 25.04406247755438 26.44798417618361 40-41 20.395569183171737 28.813568685947903 23.05847904754012 27.73238308334024 42-43 16.667034982652318 28.100483967205143 24.69116704603213 30.541314004110404 44-45 16.501104972375693 24.592265193370167 28.1353591160221 30.771270718232046 46-47 18.812291441073125 27.23586219089081 24.85635676559634 29.095489602439724 48-49 19.50487829132736 28.044926687513122 23.777664828790208 28.67253019236931 50-51 24.708150783697327 27.29929668896857 20.256794161358226 27.735758365975876 52-53 15.512506699524264 30.2448296248819 23.422641905593345 30.8200217700005 54-55 17.703447094639017 26.746338256175655 23.043432618941065 32.50678203024427 56-57 19.647602892993497 28.338186298614833 21.207918713291967 30.806292095099703 58-59 18.485407711093675 28.61215784646326 22.063032499751362 30.8394019426917 60-61 15.903364130675039 26.6632774855223 23.18476194686353 34.248596436939124 62-63 18.503784739488367 27.27333001823305 22.244322890767446 31.97856235151113 64-65 18.924847634255908 26.53014990689527 21.615215024947645 32.92978743390117 66-67 16.372898962327746 32.41261561923285 19.206329911261893 32.00815550717751 68-69 17.819298807774327 34.80879086881098 17.938631868556843 29.43327845485785 70-71 16.264744067843427 35.21725919173503 19.851385320847488 28.666611419574046 72-73 17.9206400070719 32.22079801986762 21.149404965800727 28.70915700725975 74-75 17.159779659986853 32.965363301343146 18.97531948749399 30.899537551176014 76 18.755593860841316 32.26483685263146 18.595374636744346 30.384194649782874 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 8.0 15 16.0 16 20.0 17 24.0 18 24.0 19 29.5 20 47.0 21 59.0 22 56.5 23 71.0 24 138.0 25 188.0 26 233.0 27 332.0 28 402.0 29 418.0 30 519.0 31 723.0 32 904.0 33 982.0 34 1088.5 35 1384.5 36 1815.0 37 2056.0 38 2321.0 39 2782.0 40 3324.0 41 3878.0 42 4086.0 43 4336.5 44 4821.5 45 5163.5 46 5271.0 47 5386.0 48 5515.5 49 5424.5 50 5319.0 51 5034.0 52 4654.0 53 4363.0 54 4167.0 55 3915.0 56 3479.5 57 3054.5 58 2813.0 59 2572.0 60 2138.5 61 1830.0 62 1714.0 63 1549.0 64 1269.5 65 1064.0 66 876.5 67 780.0 68 686.5 69 577.5 70 505.0 71 448.0 72 414.0 73 352.0 74 271.0 75 218.0 76 204.5 77 186.0 78 163.0 79 145.0 80 141.5 81 114.0 82 73.5 83 57.0 84 52.5 85 44.0 86 32.5 87 25.0 88 25.5 89 23.5 90 15.5 91 11.0 92 12.0 93 8.0 94 5.0 95 6.5 96 7.0 97 9.0 98 9.5 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.002209871495972509 7 0.006629614487917527 8 0.002209871495972509 9 0.008839485983890037 10-11 0.0027623393699656366 12-13 0.0 14-15 5.524678739931273E-4 16-17 0.0 18-19 0.0016574036219793818 20-21 0.0 22-23 0.0033148072439587637 24-25 0.0033148072439587637 26-27 5.524678739931273E-4 28-29 0.0060771466139244 30-31 5.524678739931273E-4 32-33 0.0 34-35 0.004419742991945018 36-37 0.01988884346375258 38-39 0.007182082361910655 40-41 5.524678739931273E-4 42-43 0.0011049357479862546 44-45 0.0033148072439587637 46-47 0.0011049357479862546 48-49 0.0 50-51 0.0027623393699656366 52-53 0.01270676110184193 54-55 0.007182082361910655 56-57 0.009391953857883165 58-59 0.011049357479862547 60-61 0.02099377921173884 62-63 0.008839485983890037 64-65 0.014916632597814438 66-67 0.013259228975835055 68-69 0.0 70-71 5.524678739931273E-4 72-73 0.004419742991945018 74-75 0.007182082361910655 76 0.002209871495972509 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 90503.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.23377125620145 #Duplication Level Percentage of deduplicated Percentage of total 1 89.93457473578259 73.05724672110317 2 4.309090167167671 7.0008728992409095 3 2.5054747752281723 6.105874943372043 4 1.5030128266162488 4.883816006099245 5 0.7861913246915764 3.193264311680276 6 0.45974509990614665 2.2408096969161244 7 0.21627062392034713 1.2297934875087013 8 0.10745521565853726 0.6983193927273129 9 0.07753097838653952 0.5668320387169485 >10 0.09929406003890151 0.9568743577560965 >50 0.0013601926032726236 0.06629614487917528 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006629614487917527 0.0 2 0.0 0.0 0.0 0.006629614487917527 0.0 3 0.0 0.0 0.0 0.006629614487917527 0.0 4 0.0 0.0 0.0 0.008839485983890037 0.0 5 0.0 0.0 0.0 0.01436416472382131 0.0 6 0.0 0.0 0.0 0.01436416472382131 0.0 7 0.0 0.0 0.0 0.01436416472382131 0.0 8 0.0 0.0 0.0 0.01436416472382131 0.0 9 0.0 0.0 0.0 0.01657403621979382 0.0 10 0.0 0.0 0.0 0.017678971967780073 0.0 11 0.0 0.0 0.0 0.017678971967780073 0.0 12 0.0 0.0 0.0 0.017678971967780073 0.0 13 0.0 0.0 0.0 0.017678971967780073 0.0 14 0.0 0.0 0.0 0.027623393699656364 0.0 15 0.0 0.0 0.0 0.027623393699656364 0.0 16 0.0011049357479862546 0.0 0.0 0.027623393699656364 0.0 17 0.0011049357479862546 0.0 0.0 0.027623393699656364 0.0 18 0.0011049357479862546 0.0 0.0 0.03314807243958764 0.0 19 0.0011049357479862546 0.0 0.0 0.03867275117951891 0.0 20 0.0011049357479862546 0.0 0.0 0.03867275117951891 0.0 21 0.0011049357479862546 0.0 0.0 0.05745665889528524 0.0 22 0.0011049357479862546 0.0 0.0 0.10054915306674916 0.0 23 0.0011049357479862546 0.0 0.0 0.10828370330265295 0.0 24 0.0011049357479862546 0.0 0.0 0.1314873540103643 0.0 25 0.0011049357479862546 0.0 0.0 0.13701203275029558 0.0 26 0.0011049357479862546 0.0 0.0 0.13701203275029558 0.0 27 0.0011049357479862546 0.0 0.0 0.15800581196203442 0.0 28 0.0011049357479862546 0.0 0.0 0.18341933416571826 0.0 29 0.002209871495972509 0.0 0.0 0.21988221384926465 0.0 30 0.002209871495972509 0.0 0.0 0.24419080030496226 0.0 31 0.002209871495972509 0.0 0.0 0.25855496502878356 0.0 32 0.002209871495972509 0.0 0.0 0.29501784471233 0.0 33 0.002209871495972509 0.0 0.0 0.32706098140393136 0.0 34 0.002209871495972509 0.0 0.0 0.3867275117951891 0.0 35 0.002209871495972509 0.0 0.0 0.47070262864214446 0.0 36 0.002209871495972509 0.0 0.0 0.612134404384385 0.0 37 0.002209871495972509 0.0 0.0 0.9038374418527563 0.0 38 0.002209871495972509 0.0 0.0 1.1867009933372374 0.0 39 0.002209871495972509 0.0 0.0 1.4960830027733887 0.0 40 0.002209871495972509 0.0 0.0 1.8629216711048253 0.0 41 0.002209871495972509 0.0 0.0 2.2496491829000145 0.0 42 0.002209871495972509 0.0 0.0 2.7391357192579253 0.0 43 0.002209871495972509 0.0 0.0 3.284973978763135 0.0 44 0.002209871495972509 0.0 0.0 3.6440780968586677 0.0 45 0.002209871495972509 0.0 0.0 4.135774504712551 0.0 46 0.002209871495972509 0.0 0.0 4.5899030971349015 0.0 47 0.002209871495972509 0.0 0.0 5.052871175541142 0.0 48 0.002209871495972509 0.0 0.0 5.405345679148757 0.0 49 0.002209871495972509 0.0 0.0 5.804227484171795 0.0 50 0.002209871495972509 0.0 0.0 6.190954995966985 0.0 51 0.002209871495972509 0.0 0.0 6.5865219937460635 0.0 52 0.002209871495972509 0.0 0.0 7.025181485696606 0.0 53 0.002209871495972509 0.0 0.0 7.440637326939439 0.0 54 0.002209871495972509 0.0 0.0 7.780957537319205 0.0 55 0.002209871495972509 0.0 0.0 8.187573892578147 0.0 56 0.002209871495972509 0.0 0.0 8.577616211617295 0.0 57 0.002209871495972509 0.0 0.0 8.890313028297404 0.0 58 0.002209871495972509 0.0 0.0 9.226213495685226 0.0 59 0.002209871495972509 0.0 0.0 9.530070826381445 0.0 60 0.002209871495972509 0.0 0.0 9.910168723688718 0.0 61 0.002209871495972509 0.0 0.0 10.25490867706043 0.0 62 0.002209871495972509 0.0 0.0 10.611802923659988 0.0 63 0.002209871495972509 0.0 0.0 10.913450382860237 0.0 64 0.002209871495972509 0.0 0.0 11.173110283637007 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCCGG 15 0.0022182693 70.0 46 TCGGTGG 95 0.0 66.31579 45 CGGTGGT 100 0.0 62.999996 46 CTCGGTG 90 0.0 62.222225 44 ATCTCGG 130 0.0 59.230766 42 TCGCCGT 90 0.0 58.333336 52 AGATCTC 170 0.0 57.64706 40 TGGTCGC 85 0.0 57.64706 49 TCTCGGT 110 0.0 57.272724 43 ATCTCCG 25 2.379245E-4 55.999996 42 GTGTCGA 25 2.379245E-4 55.999996 36 AGAGGAT 25 2.379245E-4 55.999996 28 GGTGGTC 95 0.0 55.263157 47 GATCTCG 165 0.0 55.151516 41 GTGTTAG 20 0.0069314633 52.500004 1 ACCGGGT 20 0.0069314633 52.500004 59 ACGTTTG 20 0.0069314633 52.500004 12 CTATCTG 20 0.0069314633 52.500004 54 GTAGATC 160 0.0 52.500004 38 TCTCGGA 20 0.0069314633 52.500004 43 >>END_MODULE