##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779823_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 101664 Sequences flagged as poor quality 0 Sequence length 76 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.415201054453888 32.0 21.0 34.0 12.0 34.0 2 26.870711362920996 32.0 21.0 34.0 12.0 34.0 3 26.44758223166509 32.0 21.0 34.0 11.0 34.0 4 26.93565077116777 32.0 21.0 34.0 12.0 34.0 5 27.145548079949638 34.0 21.0 34.0 11.0 34.0 6 29.40474504249292 35.0 21.0 38.0 11.0 38.0 7 29.617229304375197 36.0 21.0 38.0 12.0 38.0 8 29.029882751022978 34.0 21.0 38.0 11.0 38.0 9 29.83741540761725 36.0 23.0 38.0 11.0 38.0 10-11 28.48305201447907 34.0 21.0 38.0 11.0 38.0 12-13 29.025043279823734 34.0 21.0 38.0 11.0 38.0 14-15 27.930865399748193 33.5 16.0 38.0 11.0 38.0 16-17 28.418024079320112 34.0 21.0 38.0 11.0 38.0 18-19 29.010898646521877 35.0 21.0 38.0 11.0 38.0 20-21 28.06998544224111 32.5 16.0 38.0 11.0 38.0 22-23 28.793938857412655 35.0 21.0 38.0 11.0 38.0 24-25 29.09008596946805 35.0 21.0 38.0 11.0 38.0 26-27 28.066493547371735 34.0 21.0 38.0 11.0 38.0 28-29 28.918929021089077 35.0 21.0 38.0 11.0 38.0 30-31 29.262501967264715 36.0 21.0 38.0 11.0 38.0 32-33 29.425337385898647 36.0 21.0 38.0 11.0 38.0 34-35 29.38662161630469 36.0 21.0 38.0 11.0 38.0 36-37 28.90153348284545 35.0 21.0 38.0 11.0 38.0 38-39 28.814368901479384 35.0 21.0 38.0 11.0 38.0 40-41 28.768492288322314 34.5 21.0 38.0 11.0 38.0 42-43 29.165958451369214 35.0 21.0 38.0 11.0 38.0 44-45 29.263072474032107 36.0 21.0 38.0 11.0 38.0 46-47 29.1441070585458 36.0 21.0 38.0 11.0 38.0 48-49 28.759846159899276 34.5 21.0 38.0 11.0 38.0 50-51 28.176502990242366 34.0 16.0 38.0 11.0 38.0 52-53 28.739214471199244 34.0 21.0 38.0 11.0 38.0 54-55 28.85667984734026 35.0 21.0 38.0 11.0 38.0 56-57 28.928376809883538 35.5 21.0 38.0 11.0 38.0 58-59 29.073511764242998 36.0 21.0 38.0 11.0 38.0 60-61 29.042778171230722 35.5 21.0 38.0 11.0 38.0 62-63 28.972891092225368 36.0 21.0 38.0 11.0 38.0 64-65 28.957069365753856 35.5 21.0 38.0 11.0 38.0 66-67 28.958953021718603 35.0 21.0 38.0 11.0 38.0 68-69 28.35564703336481 34.0 21.0 38.0 11.0 38.0 70-71 28.410268138180676 34.0 21.0 38.0 11.0 38.0 72-73 28.462312126219704 34.0 21.0 38.0 11.0 38.0 74-75 28.53149590808939 34.0 21.0 38.0 11.0 38.0 76 27.671289738747245 33.0 20.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 61.0 13 593.0 14 1839.0 15 3319.0 16 4368.0 17 5199.0 18 5529.0 19 4982.0 20 4051.0 21 2775.0 22 2163.0 23 1679.0 24 1511.0 25 1402.0 26 1441.0 27 1605.0 28 1765.0 29 1833.0 30 2261.0 31 2598.0 32 3342.0 33 4054.0 34 5277.0 35 7266.0 36 11765.0 37 18983.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.920915958451374 17.673906200818383 8.516288951841359 38.88888888888889 2 19.57428391564369 21.629091910607492 31.392626691847653 27.403997481901165 3 22.17500786905886 20.19298866855524 31.061142587346552 26.570860875039344 4 14.912996862181915 26.422592290213746 27.215407768804777 31.449003078799564 5 16.093209002203338 29.752911551778404 33.315627950897074 20.83825149512118 6 25.04746072809183 39.44994737515123 15.409736088842548 20.092855807914383 7 22.475900059020262 32.95101318119221 16.898485146566987 27.67460161322054 8 20.36179065718417 36.14660489273172 15.71890892279242 27.772695527291685 9 22.033681559739517 20.065317043420094 15.952507426862617 41.94849396997777 10-11 21.323706614598446 28.941142910541355 21.52486437835365 28.210286096506543 12-13 20.88399039974819 23.176345609065155 24.466379446018255 31.473284545168394 14-15 26.236683945978378 25.38484994540787 19.801697766148944 28.57676834246481 16-17 27.180354797936328 24.30715055059092 19.280764482828154 29.2317301686446 18-19 22.059756547399484 24.5729743022255 22.50829952047215 30.858969629902866 20-21 26.347576329870947 23.543732294617563 20.785135347812403 29.323556027699087 22-23 27.14668633960408 23.2716094921923 19.768351161932866 29.81335300627075 24-25 21.993744036670172 28.302332215260222 19.22282442973353 30.48109931833607 26-27 25.245540434866005 28.012020046526036 20.52654099062102 26.215898527986937 28-29 22.313159383223077 26.982268893096915 22.423825098984334 28.28074662469567 30-31 23.429254353824135 25.81555818951738 22.559719073217035 28.19546838344145 32-33 21.414660056657222 27.06759521561221 22.689939408246772 28.82780531948379 34-35 20.72131889318421 28.508474242826647 22.512566274185776 28.25764058980337 36-37 24.764012887675545 24.53232986546644 22.759536633955584 27.944120612902434 38-39 24.901506544097032 22.965575246049195 24.75936118201984 27.373557027833932 40-41 22.162712464589234 26.746931067044383 23.14929571923198 27.941060749134405 42-43 19.358075209269842 26.261274996803163 24.666791261324178 29.713858532602817 44-45 19.127295619755856 23.23113091549365 26.910516323860673 30.731057140889824 46-47 20.384615384615383 25.06098760574464 24.98426126303364 29.570135746606336 48-49 21.047765187283602 25.80559490084986 24.314408246773684 28.832231665092856 50-51 25.234476822820607 25.075617853190707 21.952539038485185 27.737366285503505 52-53 17.261579778364737 27.475689474538505 24.466939160973304 30.79579158612345 54-55 19.294371101973358 24.73881991854723 24.012827827729357 31.953981151750057 56-57 20.242000934556454 26.218243525737194 22.601018174663682 30.93873736504267 58-59 19.34130470068024 26.667027362021727 23.617020230090844 30.374647707207185 60-61 17.72978822834936 25.355043411958576 23.896499987701993 33.01866837199006 62-63 19.119947271600445 26.307142927409917 23.166556815834262 31.406352985155383 64-65 19.673477820299663 24.873828051983825 23.228919692661858 32.22377443505465 66-67 18.2067703568161 29.98603035937392 20.934293500182 30.872905783627974 68-69 18.684588448221593 31.305083412023922 19.901341674535725 30.108986465218763 70-71 17.866382066238454 30.246008872451135 20.567463088832714 31.320145972477697 72-73 17.501389428539106 29.204558309274496 22.32430491685561 30.969747345330784 74-75 17.55534460964897 28.097994756955885 21.854050571275398 32.492610062119745 76 16.484521783609914 27.565685281185136 20.53236801463717 35.41742492056778 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 0.5 12 0.0 13 0.5 14 1.0 15 3.5 16 14.0 17 22.0 18 18.0 19 28.5 20 62.5 21 82.0 22 87.0 23 113.5 24 159.0 25 183.0 26 216.5 27 291.5 28 426.5 29 520.0 30 552.5 31 667.0 32 878.0 33 1007.0 34 1092.0 35 1379.0 36 1773.0 37 1965.0 38 2227.5 39 2669.0 40 3081.5 41 3652.0 42 3989.0 43 4125.0 44 4551.0 45 4921.5 46 5002.0 47 5138.0 48 5362.5 49 5384.5 50 5318.0 51 5305.0 52 5193.0 53 4962.0 54 4830.0 55 4686.0 56 4313.0 57 3946.0 58 3808.0 59 3544.0 60 3046.0 61 2616.0 62 2420.0 63 2269.0 64 1961.5 65 1642.5 66 1369.5 67 1259.0 68 1177.0 69 1010.5 70 864.5 71 803.0 72 725.5 73 614.0 74 576.0 75 572.0 76 530.0 77 436.5 78 397.5 79 410.0 80 356.5 81 283.5 82 245.0 83 226.0 84 199.5 85 143.5 86 103.5 87 93.0 88 83.0 89 59.5 90 35.5 91 29.5 92 34.0 93 24.5 94 13.0 95 8.5 96 6.0 97 4.5 98 3.0 99 5.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 9.836323575700347E-4 5 0.0 6 9.836323575700347E-4 7 0.003934529430280139 8 0.002950897072710104 9 0.005901794145420208 10-11 0.0024590808939250865 12-13 0.0 14-15 9.836323575700347E-4 16-17 4.918161787850173E-4 18-19 0.001475448536355052 20-21 0.0 22-23 0.001475448536355052 24-25 9.836323575700347E-4 26-27 4.918161787850173E-4 28-29 0.006393610324205225 30-31 4.918161787850173E-4 32-33 0.0 34-35 0.002950897072710104 36-37 0.016229933899905572 38-39 0.0073772426817752595 40-41 0.0 42-43 9.836323575700347E-4 44-45 0.002950897072710104 46-47 0.003934529430280139 48-49 0.0 50-51 0.001475448536355052 52-53 0.010328139754485363 54-55 0.009836323575700346 56-57 0.0113117721120554 58-59 0.008360875039345295 60-61 0.021148095687755743 62-63 0.01081995593327038 64-65 0.01672175007869059 66-67 0.014754485363550519 68-69 0.0 70-71 9.836323575700347E-4 72-73 0.0034427132514951208 74-75 0.00540997796663519 76 0.004918161787850173 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 101664.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.28737802958767 #Duplication Level Percentage of deduplicated Percentage of total 1 87.57986447241045 71.19137551148883 2 6.464181994191674 10.509128108278249 3 3.2151500484027102 7.8405335221907455 4 1.5767182962245885 5.12669184765502 5 0.7187802516940949 2.921388101983003 6 0.26621490803484993 1.2983947119924457 7 0.11979670861568248 0.681657223796034 8 0.03751210067763795 0.24394082467736858 9 0.01573088092933204 0.11508498583569404 >10 0.006050338818973862 0.07180516210261254 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007869058860560278 0.0 2 0.0 0.0 0.0 0.007869058860560278 0.0 3 0.0 0.0 0.0 0.01081995593327038 0.0 4 0.0 0.0 0.0 0.011803588290840416 0.0 5 0.0 0.0 0.0 0.015738117721120555 0.0 6 0.0 0.0 0.0 0.017705382436260624 0.0 7 0.0 0.0 0.0 0.017705382436260624 0.0 8 0.0 0.0 0.0 0.017705382436260624 0.0 9 9.836323575700347E-4 0.0 0.0 0.020656279508970726 0.0 10 9.836323575700347E-4 0.0 0.0 0.022623544224110795 0.0 11 9.836323575700347E-4 0.0 0.0 0.024590808939250867 0.0 12 9.836323575700347E-4 0.0 0.0 0.0255744412968209 0.0 13 9.836323575700347E-4 0.0 0.0 0.02754170601196097 0.0 14 9.836323575700347E-4 0.0 0.0 0.030492603084671072 0.0 15 9.836323575700347E-4 0.0 0.0 0.03541076487252125 0.0 16 9.836323575700347E-4 0.0 0.0 0.04032892666037142 0.0 17 9.836323575700347E-4 0.0 0.0 0.04229619137551149 0.0 18 9.836323575700347E-4 0.0 0.0 0.04623072080579163 0.0 19 9.836323575700347E-4 0.0 0.0 0.052132514951211836 0.0 20 9.836323575700347E-4 0.0 0.0 0.05311614730878187 0.0 21 9.836323575700347E-4 0.0 0.0 0.05508341202392194 0.0 22 9.836323575700347E-4 0.0 0.0 0.059017941454202076 0.0 23 9.836323575700347E-4 0.0 0.0 0.06196883852691218 0.0 24 9.836323575700347E-4 0.0 0.0 0.06983789738747245 0.0 25 9.836323575700347E-4 0.0 0.0 0.0767233238904627 0.0 26 9.836323575700347E-4 0.0 0.0 0.0826251180358829 0.0 27 9.836323575700347E-4 0.0 0.0 0.0963959710418634 0.0 28 9.836323575700347E-4 0.0 0.0 0.12688857412653445 0.0 29 9.836323575700347E-4 0.0 0.0 0.1534466477809254 0.0 30 9.836323575700347E-4 0.0 0.0 0.20557916273213725 0.0 31 9.836323575700347E-4 0.0 0.0 0.2695152659741895 0.0 32 9.836323575700347E-4 0.0 0.0 0.340336795719232 0.0 33 9.836323575700347E-4 0.0 0.0 0.42689644318539505 0.0 34 9.836323575700347E-4 0.0 0.0 0.5626377085300598 0.0 35 9.836323575700347E-4 0.0 0.0 0.7072316650928548 0.0 36 9.836323575700347E-4 0.0 0.0 0.9039581366068619 0.0 37 9.836323575700347E-4 0.0 0.0 1.245278564683664 0.0 38 9.836323575700347E-4 0.0 0.0 1.6692241107963488 0.0 39 9.836323575700347E-4 0.0 0.0 2.187598363235757 0.0 40 9.836323575700347E-4 0.0 0.0 2.7394161158325465 0.0 41 9.836323575700347E-4 0.0 0.0 3.3128737802958765 0.0 42 9.836323575700347E-4 0.0 0.0 3.9109222536984576 0.0 43 9.836323575700347E-4 0.0 0.0 4.460772741580107 0.0 44 9.836323575700347E-4 0.0 0.0 5.012590494176896 0.0 45 9.836323575700347E-4 0.0 0.0 5.628344350015738 0.0 46 9.836323575700347E-4 0.0 0.0 6.298197985520932 0.0 47 9.836323575700347E-4 0.0 0.0 6.930673591438464 0.0 48 9.836323575700347E-4 0.0 0.0 7.592658168083097 0.0 49 9.836323575700347E-4 0.0 0.0 8.171033994334278 0.0 50 9.836323575700347E-4 0.0 0.0 8.854658482845451 0.0 51 9.836323575700347E-4 0.0 0.0 9.438936103242053 0.0 52 9.836323575700347E-4 0.0 0.0 10.048788164935473 0.0 53 9.836323575700347E-4 0.0 0.0 10.664542020774315 0.0 54 9.836323575700347E-4 0.0 0.0 11.255705067673906 0.0 55 9.836323575700347E-4 0.0 0.0 11.93047686496695 0.0 56 9.836323575700347E-4 0.0 0.0 12.565903367957192 0.0 57 9.836323575700347E-4 0.0 0.0 13.177722694365753 0.0 58 9.836323575700347E-4 0.0 0.0 13.782656594271325 0.0 59 9.836323575700347E-4 0.0 0.0 14.338408876298395 0.0 60 9.836323575700347E-4 0.0 0.0 14.865635819955934 0.0 61 9.836323575700347E-4 0.0 0.0 15.313188542650298 0.0 62 9.836323575700347E-4 0.0 0.0 15.807955618508027 0.0 63 9.836323575700347E-4 0.0 0.0 16.321411709159584 0.0 64 9.836323575700347E-4 0.0 0.0 16.7738825936418 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATACG 20 7.9079684E-5 69.9749 25 CATGACG 20 7.9272795E-5 69.94048 11 TTGTCGA 15 0.002226557 69.94048 39 CTCGGTG 120 0.0 61.258186 44 TCGGTGG 110 0.0 60.462624 45 TCCGACT 30 8.343179E-6 58.31242 20 GATCTCG 145 0.0 57.938774 41 GTAGATC 185 0.0 56.708504 38 GATACGC 25 2.3848627E-4 55.979923 26 GTCCATA 25 2.3848627E-4 55.979923 22 CGGTGGT 70 0.0 55.00735 46 TCTCGGT 115 0.0 54.789932 43 GTGTAGA 220 0.0 54.071514 36 AGATCTC 210 0.0 53.314213 40 AAACTGG 20 0.006930229 52.507015 70 CTCGTCG 20 0.006930229 52.507015 44 ACCGCTA 20 0.006930229 52.507015 42 TCGATCA 20 0.006930229 52.507015 42 CGGTCGA 20 0.006930229 52.507015 49 GCGTGGA 20 0.006930229 52.507015 51 >>END_MODULE