##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779818_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 219164 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.244656969210272 34.0 23.0 34.0 12.0 34.0 2 28.96982168604333 34.0 24.0 34.0 12.0 34.0 3 28.617126900403353 34.0 23.0 34.0 11.0 34.0 4 28.958975926703292 34.0 24.0 34.0 12.0 34.0 5 29.574318774981293 34.0 31.0 34.0 11.0 34.0 6 31.970547170155683 37.0 28.0 38.0 12.0 38.0 7 31.8244191564308 37.0 27.0 38.0 12.0 38.0 8 31.250529284006497 37.0 27.0 38.0 11.0 38.0 9 32.29732529064992 37.0 31.0 38.0 12.0 38.0 10-11 30.840776769907468 36.5 25.5 38.0 11.0 38.0 12-13 31.6329803252359 37.0 27.5 38.0 11.0 38.0 14-15 30.45534622474494 36.5 24.5 38.0 11.0 38.0 16-17 31.08158958588089 36.5 26.0 38.0 11.0 38.0 18-19 32.01020696829771 37.0 31.0 38.0 11.0 38.0 20-21 30.644905185158148 36.5 25.5 38.0 11.0 38.0 22-23 31.55142039751054 37.0 28.5 38.0 11.0 38.0 24-25 31.90690533116753 37.0 29.0 38.0 11.0 38.0 26-27 30.76574163640014 37.0 25.0 38.0 11.0 38.0 28-29 31.978486430253145 37.0 29.0 38.0 11.0 38.0 30-31 32.43563039550291 37.5 31.0 38.0 11.0 38.0 32-33 32.57030123560439 38.0 31.5 38.0 11.0 38.0 34-35 32.459350075742364 37.5 31.5 38.0 11.0 38.0 36-37 31.904391232136664 37.0 29.0 38.0 11.0 38.0 38-39 31.817876111040135 37.0 29.0 38.0 11.0 38.0 40-41 31.812211403332668 37.0 29.0 38.0 11.0 38.0 42-43 32.25271029913672 37.0 30.0 38.0 11.0 38.0 44-45 32.32765873957402 37.0 31.0 38.0 11.0 38.0 46-47 32.22417915351062 37.0 31.0 38.0 11.0 38.0 48-49 31.865046266722636 37.0 29.0 38.0 11.0 38.0 50-51 31.207915077293716 37.0 26.0 38.0 11.0 38.0 52-53 31.82314613713931 37.0 29.0 38.0 11.0 38.0 54-55 31.982303206731032 37.0 29.0 38.0 11.0 38.0 56-57 32.096245277509084 37.0 30.5 38.0 11.0 38.0 58-59 32.361852311511015 37.0 31.0 38.0 11.0 38.0 60-61 32.20680859995255 37.0 31.0 38.0 11.0 38.0 62-63 32.22480425617346 37.0 31.0 38.0 11.0 38.0 64-65 32.23213666478071 37.0 31.0 38.0 11.0 38.0 66-67 32.092750177948936 37.0 31.0 38.0 11.0 38.0 68-69 31.39894781989743 37.0 27.0 38.0 11.0 38.0 70-71 31.369524648208646 37.0 26.5 38.0 11.0 38.0 72-73 31.540161705389572 37.0 27.0 38.0 11.0 38.0 74-75 31.588509061707214 37.0 28.0 38.0 11.0 38.0 76 30.43472924385392 36.0 25.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 50.0 13 639.0 14 2005.0 15 3544.0 16 5013.0 17 5955.0 18 6262.0 19 5553.0 20 4715.0 21 3607.0 22 2987.0 23 2588.0 24 2608.0 25 2729.0 26 2992.0 27 3480.0 28 4089.0 29 4766.0 30 5744.0 31 6990.0 32 8729.0 33 10774.0 34 14454.0 35 20605.0 36 33079.0 37 55206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.625248672227194 22.49502655545619 9.516617692686754 30.363107079629863 2 19.29924622657006 24.777791973134274 30.505922505520978 25.41703929477469 3 17.340895402529615 22.072968188206094 32.82519026847475 27.760946140789542 4 12.976127466189702 22.254111076636672 30.713073314960486 34.05668814221314 5 13.63453851909985 33.272343998101874 34.8232373930025 18.26988008979577 6 26.348906501672303 40.636250393549886 16.36209327474573 16.652749830032075 7 25.980953597780506 28.65767126475594 18.80638287192732 26.55499226553623 8 23.002546154758754 36.38582914297708 18.821468008797467 21.790156693466695 9 22.876282261891724 18.522524002482385 19.10113897711094 39.50005475851495 10-11 22.831088773245057 27.083014881855455 23.941923576208197 26.1439727686913 12-13 23.016325673924552 23.47625522439817 25.2258582613933 28.281560840283987 14-15 24.46267039297325 25.22169622996635 21.792277419722808 28.523355957337593 16-17 25.10340453588303 26.09262034964764 22.861014721885716 25.94296039258362 18-19 21.878685973849976 25.88514705110685 25.218734386300323 27.01743258874285 20-21 24.329725684875253 25.301372488182366 24.46318738478947 25.90571444215291 22-23 25.220390954388655 25.453330048002336 23.48966033327858 25.83661866433043 24-25 21.672541437094328 28.249090266132804 23.47923297172125 26.59913532505162 26-27 23.605718118478027 27.920315016677083 23.988538211285665 24.485428653559225 28-29 22.132177968209206 27.49125604889768 25.468454470993812 24.908111511899303 30-31 22.38247875434894 27.04271944333542 25.067472765641934 25.507329036673703 32-33 21.539626808296088 27.745495942526926 24.860663386010902 25.85421386316608 34-35 21.723338626366605 27.969802332585008 25.22563835806457 25.081220682983812 36-37 23.926069594980035 25.766343411294923 25.05693097547062 25.250656018254418 38-39 23.281335916092278 25.353703361465328 26.237591006888117 25.127369715554277 40-41 22.08794844008441 26.580505332801003 25.665430901728172 25.666115325386414 42-43 20.443413250837843 26.318707266492826 26.519470623529923 26.71840885913941 44-45 19.82163268379157 24.801681005865724 27.954251452742245 27.422434857600457 46-47 20.927643361509414 24.76711953731905 27.289962698059618 27.015274403111917 48-49 20.514136706157732 25.594134059731662 27.75895621305555 26.132773021055055 50-51 22.891214429607526 25.45075412768268 25.91411317276608 25.743918269943716 52-53 18.422505646946085 26.654726322754343 27.21211982933674 27.710648200962833 54-55 18.669973442362625 26.093335036916027 26.877743604720138 28.358947916001203 56-57 19.208128174355092 26.659106776977172 26.262326651120976 27.870438397546764 58-59 19.194631791258637 26.797920982741786 26.304861687855364 27.702585538144213 60-61 18.725740534101877 25.79415878840155 26.172726256243855 29.307374421252717 62-63 19.33982390132268 25.701782206230305 26.28931018511124 28.669083707335773 64-65 20.00739324294105 25.187683404907833 25.561681095660347 29.243242256490763 66-67 19.52986489662458 27.34057870153814 24.012622730498315 29.116933671338963 68-69 19.68512020733427 28.294465762925313 23.092629686580306 28.927784343160113 70-71 19.836560376157525 27.619562564021837 23.429540046586226 29.114337013234408 72-73 19.236104456703764 27.501790986205982 23.87875137461043 29.383353182479823 74-75 18.879810533376837 26.887878379950852 24.09196797502983 30.140343111642476 76 18.37258963852563 26.112211281358654 23.83485886894387 31.68034021117185 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 1.0 11 1.0 12 0.0 13 2.0 14 11.5 15 14.0 16 15.0 17 21.0 18 27.0 19 41.5 20 54.5 21 59.0 22 102.0 23 197.0 24 307.0 25 365.0 26 470.0 27 652.5 28 908.0 29 1086.0 30 1341.0 31 1813.0 32 2391.5 33 2753.0 34 3235.0 35 4193.5 36 5186.0 37 5702.0 38 6330.5 39 7811.5 40 9299.0 41 10729.5 42 11525.0 43 12010.0 44 13075.0 45 13661.5 46 13668.0 47 13772.0 48 13843.5 49 13402.5 50 12994.0 51 12303.0 52 10620.0 53 9113.0 54 8598.0 55 7866.5 56 6645.5 57 5591.0 58 5026.0 59 4590.5 60 3793.0 61 3183.0 62 2935.0 63 2702.5 64 2325.0 65 2076.0 66 1848.0 67 1724.0 68 1610.0 69 1450.5 70 1313.5 71 1222.0 72 1132.5 73 981.5 74 870.0 75 820.0 76 765.5 77 662.0 78 578.0 79 543.0 80 495.0 81 415.0 82 334.0 83 285.0 84 261.5 85 199.5 86 158.0 87 155.0 88 123.5 89 82.0 90 57.5 91 32.0 92 21.0 93 22.0 94 19.5 95 12.5 96 9.0 97 9.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0022813965797302475 7 0.006844189739190742 8 0.004562793159460495 9 0.00912558631892099 10-11 0.002053256921757223 12-13 0.0 14-15 6.844189739190743E-4 16-17 2.2813965797302478E-4 18-19 0.0025095362377032726 20-21 0.0 22-23 0.0036502345275683966 24-25 0.002965815553649322 26-27 4.5627931594604957E-4 28-29 0.005703491449325619 30-31 6.844189739190743E-4 32-33 2.2813965797302478E-4 34-35 0.0036502345275683966 36-37 0.017794893321895933 38-39 0.008441167345001917 40-41 6.844189739190743E-4 42-43 2.2813965797302478E-4 44-45 0.00433465350148747 46-47 0.002965815553649322 48-49 2.2813965797302478E-4 50-51 0.0015969776058111734 52-53 0.00866930700297494 54-55 0.008213027687028892 56-57 0.011406982898651238 58-59 0.01003814495081309 60-61 0.022129546823383403 62-63 0.011635122556624264 64-65 0.02053256921757223 66-67 0.01619791571608476 68-69 4.5627931594604957E-4 70-71 2.2813965797302478E-4 72-73 0.005019072475406545 74-75 0.010266284608786116 76 0.002737675895676297 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 219164.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.29103001216279 #Duplication Level Percentage of deduplicated Percentage of total 1 81.9763536517812 54.34296920217899 2 7.2465632003575084 9.607642771998682 3 4.263054657574372 8.478068527462595 4 2.5497909017033646 6.761130607582297 5 1.4252954700875613 4.724215239188711 6 0.7644359349690102 3.0405147304443827 7 0.4584013459597079 2.1271528167841574 8 0.3036009024397856 1.6100813228284432 9 0.2101009534942309 1.2535027752303074 >10 0.8017003570824284 8.023980720876272 >50 7.026245508803643E-4 0.03074128542519714 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.562793159460495E-4 0.0 2 0.0 0.0 0.0 4.562793159460495E-4 0.0 3 0.0 0.0 0.0 4.562793159460495E-4 0.0 4 0.0 0.0 0.0 9.12558631892099E-4 0.0 5 0.0 0.0 0.0 0.002737675895676297 0.0 6 0.0 0.0 0.0 0.002737675895676297 0.0 7 0.0 0.0 0.0 0.002737675895676297 0.0 8 0.0 0.0 0.0 0.002737675895676297 0.0 9 0.0 0.0 0.0 0.002737675895676297 0.0 10 0.0 0.0 0.0 0.002737675895676297 0.0 11 0.0 0.0 0.0 0.002737675895676297 0.0 12 0.0 0.0 0.0 0.003650234527568396 0.0 13 0.0 0.0 0.0 0.003650234527568396 0.0 14 0.0 0.0 0.0 0.005931631107298644 0.0 15 0.0 0.0 0.0 0.01003814495081309 0.0 16 0.0 0.0 0.0 0.01003814495081309 0.0 17 4.562793159460495E-4 0.0 0.0 0.01049442426675914 0.0 18 4.562793159460495E-4 0.0 0.0 0.01049442426675914 0.0 19 4.562793159460495E-4 0.0 0.0 0.015513496742165685 0.0 20 4.562793159460495E-4 0.0 0.0 0.01825117263784198 0.0 21 4.562793159460495E-4 0.0 0.0 0.019163731269734082 0.0 22 4.562793159460495E-4 0.0 0.0 0.024639083061086677 0.0 23 4.562793159460495E-4 0.0 0.0 0.02965815553649322 0.0 24 4.562793159460495E-4 0.0 0.0 0.03467722801189976 0.0 25 4.562793159460495E-4 0.0 0.0 0.035589786643791865 0.0 26 4.562793159460495E-4 0.0 0.0 0.040608859119198405 0.0 27 4.562793159460495E-4 0.0 0.0 0.07984888029055867 0.0 28 4.562793159460495E-4 0.0 0.0 0.11863262214597288 0.0 29 4.562793159460495E-4 0.0 0.0 0.1701921848478765 0.0 30 4.562793159460495E-4 0.0 0.0 0.21992663028599588 0.0 31 4.562793159460495E-4 0.0 0.0 0.26646712051249294 0.0 32 4.562793159460495E-4 0.0 0.0 0.322133197057911 0.0 33 4.562793159460495E-4 0.0 0.0 0.4042634739281999 0.0 34 4.562793159460495E-4 0.0 0.0 0.5133142304393057 0.0 35 4.562793159460495E-4 0.0 0.0 0.6392473216404154 0.0 36 4.562793159460495E-4 0.0 0.0 0.8815316384077677 0.0 37 4.562793159460495E-4 0.0 0.0 1.2935518607070504 0.0 38 4.562793159460495E-4 0.0 0.0 1.878958223065832 0.0 39 4.562793159460495E-4 0.0 0.0 2.624974904637623 0.0 40 4.562793159460495E-4 0.0 0.0 3.4394334836013214 0.0 41 4.562793159460495E-4 0.0 0.0 4.377543757186399 0.0 42 4.562793159460495E-4 0.0 0.0 5.4041722180650105 0.0 43 4.562793159460495E-4 0.0 0.0 6.385629026664963 0.0 44 4.562793159460495E-4 0.0 0.0 7.339709076308153 0.0 45 4.562793159460495E-4 0.0 0.0 8.320253326276212 0.0 46 4.562793159460495E-4 0.0 0.0 9.337756200835903 0.0 47 4.562793159460495E-4 0.0 0.0 10.337920461389645 0.0 48 4.562793159460495E-4 0.0 0.0 11.29930098008797 0.0 49 4.562793159460495E-4 0.0 0.0 12.197714953185741 0.0 50 4.562793159460495E-4 0.0 0.0 13.00989213556971 0.0 51 4.562793159460495E-4 0.0 0.0 13.890967494661531 0.0 52 4.562793159460495E-4 0.0 0.0 14.800332171342008 0.0 53 4.562793159460495E-4 0.0 0.0 15.632585643627603 0.0 54 4.562793159460495E-4 0.0 0.0 16.512292164771587 0.0 55 4.562793159460495E-4 0.0 0.0 17.33907028526583 0.0 56 4.562793159460495E-4 0.0 0.0 18.055428811301127 0.0 57 4.562793159460495E-4 0.0 0.0 18.835210162252924 0.0 58 4.562793159460495E-4 0.0 0.0 19.583964519720393 0.0 59 4.562793159460495E-4 0.0 0.0 20.28070303517001 0.0 60 4.562793159460495E-4 0.0 0.0 20.945501998503403 0.0 61 4.562793159460495E-4 0.0 0.0 21.615320034312205 0.0 62 4.562793159460495E-4 0.0 0.0 22.30749575660236 0.0 63 4.562793159460495E-4 0.0 0.0 22.97548867514738 0.0 64 4.562793159460495E-4 0.0 0.0 23.570476903141028 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGTAT 50 1.4551915E-11 63.017666 54 TGGTCGC 120 0.0 61.23922 49 CGGTGGT 145 0.0 53.0941 46 CGTATTT 20 0.006930609 52.52671 56 TCGCCGT 80 0.0 52.50274 52 TGATACA 20 0.0069494057 52.490757 2 TGCGCGA 20 0.0069494057 52.490757 14 GACGGCA 20 0.0069494057 52.490757 67 CAATACG 20 0.0069494057 52.490757 11 GTAGATC 155 0.0 49.68001 38 AGCGATC 30 5.8674254E-4 46.669098 27 TCGGTGG 150 0.0 46.65845 45 GTCGCCG 145 0.0 45.853996 51 GTGGTCG 170 0.0 45.286148 48 ATCTCGG 135 0.0 44.066315 42 AGATCTC 175 0.0 43.99226 40 TAGATCT 175 0.0 43.99226 39 TCTCGGT 115 0.0 42.601192 43 AGGTGTA 125 0.0 42.00219 34 GATCTCG 150 0.0 41.992607 41 >>END_MODULE