SRR1779809_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779809_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	219476
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGAAA	20	0.006942697	52.503593	38
ACGATAA	20	0.0069552283	52.479664	24
CCACGTT	20	0.0069552283	52.479664	13
CGATAAG	20	0.0069552283	52.479664	25
GTAGATT	50	3.4663426E-6	42.002872	38
GACGATA	50	3.477233E-6	41.98373	23
GTGGTCG	110	0.0	41.366467	48
TCGGTGG	120	0.0	40.808212	45
CCGTATC	95	3.6379788E-12	40.55683	55
CGCCGTA	105	0.0	40.030117	53
GCGTAGA	35	0.001251722	40.01186	36
GTCTAAA	35	0.001254533	39.993618	1
GGTCAAC	35	0.001254533	39.993618	1
TATGCCT	35	0.001254533	39.993618	6
TACCACG	35	0.0012559403	39.9845	8
ACGAATA	80	1.4188117E-9	39.35975	24
CGTATCC	45	9.14924E-5	38.90929	56
AGGTGTA	100	7.2759576E-12	38.511414	34
TCGCCGT	110	0.0	38.20185	52
TCTCGGT	110	0.0	38.16703	43