##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779805_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 189987 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.683952059877782 34.0 31.0 34.0 12.0 34.0 2 30.11726065467637 34.0 31.0 34.0 12.0 34.0 3 29.812508224246923 34.0 31.0 34.0 11.0 34.0 4 29.874859858832448 34.0 31.0 34.0 12.0 34.0 5 30.642770294809644 34.0 32.0 34.0 21.0 34.0 6 33.160463610668096 37.0 34.0 38.0 21.0 38.0 7 33.41611268139399 38.0 34.0 38.0 21.0 38.0 8 32.56636506708354 37.0 31.0 38.0 11.0 38.0 9 33.48668593114266 38.0 34.0 38.0 21.0 38.0 10-11 32.09556706511498 37.0 30.0 38.0 11.5 38.0 12-13 33.025414896808726 37.0 34.0 38.0 16.0 38.0 14-15 31.79101464837068 37.0 29.0 38.0 11.0 38.0 16-17 32.450701890129324 37.0 30.5 38.0 16.0 38.0 18-19 33.32437482564596 37.5 34.0 38.0 21.0 38.0 20-21 32.0309731718486 37.0 30.0 38.0 16.0 38.0 22-23 32.94579892308421 37.5 32.5 38.0 16.0 38.0 24-25 33.25253833157006 38.0 34.0 38.0 16.0 38.0 26-27 32.17350134482886 37.0 30.0 38.0 11.0 38.0 28-29 33.41054651107707 37.5 34.0 38.0 16.0 38.0 30-31 33.8093132688026 38.0 35.0 38.0 21.0 38.0 32-33 33.90720154536889 38.0 35.5 38.0 21.0 38.0 34-35 33.8664987604415 38.0 34.5 38.0 21.0 38.0 36-37 33.36555659071411 38.0 34.0 38.0 16.0 38.0 38-39 33.33008574270871 38.0 34.0 38.0 16.0 38.0 40-41 33.30100217383295 38.0 34.0 38.0 16.0 38.0 42-43 33.68570744314085 38.0 35.0 38.0 16.0 38.0 44-45 33.73212377689 38.0 34.0 38.0 21.0 38.0 46-47 33.66861416833784 38.0 34.0 38.0 21.0 38.0 48-49 33.38357624469043 38.0 34.0 38.0 16.0 38.0 50-51 32.759065093927475 37.5 32.5 38.0 11.0 38.0 52-53 33.32219046566344 37.5 34.0 38.0 21.0 38.0 54-55 33.46988214983131 38.0 34.0 38.0 16.0 38.0 56-57 33.51226662876934 38.0 34.0 38.0 16.0 38.0 58-59 33.758391363619616 38.0 35.0 38.0 21.0 38.0 60-61 33.63941743382442 38.0 34.0 38.0 21.0 38.0 62-63 33.66516656402806 38.0 34.0 38.0 21.0 38.0 64-65 33.688615536852524 38.0 34.5 38.0 21.0 38.0 66-67 33.54283977324764 38.0 34.0 38.0 21.0 38.0 68-69 32.918015443161906 38.0 32.5 38.0 11.0 38.0 70-71 32.993612720870374 37.0 33.5 38.0 11.0 38.0 72-73 33.20434819224474 37.5 34.0 38.0 15.0 38.0 74-75 33.24673003942375 38.0 34.0 38.0 15.0 38.0 76 32.30607883697306 37.0 31.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 29.0 13 301.0 14 1255.0 15 2497.0 16 3509.0 17 4073.0 18 4049.0 19 3518.0 20 2704.0 21 2100.0 22 1746.0 23 1428.0 24 1462.0 25 1551.0 26 1702.0 27 2002.0 28 2407.0 29 2911.0 30 3779.0 31 4784.0 32 6221.0 33 8324.0 34 11686.0 35 17814.0 36 32107.0 37 66027.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.07573189603445 19.35037318539261 10.08021643700062 28.493678481572328 2 20.02558069762668 20.44455673282909 31.757962386900157 27.771900182644078 3 18.09334322874723 21.379883886792253 32.88803970798002 27.638733176480496 4 12.688762915357366 22.93630616831678 32.403796049203365 31.971134867122487 5 13.188270776421545 33.83863106423071 35.90245648386469 17.07064167548306 6 27.370964176307726 37.150632151842764 17.055993599528385 18.422410072321117 7 26.078854555982524 31.351792388271832 19.941043322629888 22.628309733115756 8 23.004042445679637 35.77406518443658 17.920982819605864 23.300909550277918 9 24.16579372641087 17.43792473588074 19.51613667349227 38.88014486421611 10-11 23.0641081988699 26.187274158018987 24.876107661981173 25.872509981129937 12-13 23.185655785163117 23.031170717842368 26.081658648531995 27.701514848462516 14-15 24.05558333552649 25.19330473458431 22.972603100244758 27.778508829644444 16-17 25.027107260534986 26.46563430989652 23.573052751255354 24.93420567831314 18-19 21.885288830754572 26.400202124943746 25.82962025249827 25.884888791803412 20-21 23.367914646791625 25.77781637691 25.8620326653929 24.992236310905483 22-23 24.97019462318898 25.64157225007567 24.49067677286066 24.897556353874702 24-25 22.08679861038004 28.21533845667965 24.63943573007685 25.05842720286346 26-27 22.89411560355922 28.20557358324714 25.36772543167768 23.532585381515958 28-29 22.29076907285413 27.49275564480683 26.52052501506773 23.695950267271307 30-31 22.67752012653597 27.06180208489595 26.231738737956316 24.028939050611758 32-33 21.349092306315693 28.342728713017205 26.008621642533434 24.299557338133663 34-35 21.736292599991053 28.535710431915025 25.601709658147325 24.1262873099466 36-37 23.369430741935993 26.565288577460265 25.58449899709922 24.480781683504517 38-39 23.163859651893322 26.130899271202633 26.988137631895476 23.717103445008565 40-41 21.88860290440925 26.66550869270003 26.835257149173366 24.61063125371736 42-43 20.53461693330842 26.306869172283292 27.424316990944092 25.734196903464195 44-45 20.39498790665358 24.819652543287336 28.99692336845097 25.78843618160811 46-47 20.661322328839947 25.688614244432394 28.254896490738645 25.39516693598901 48-49 20.430608410049107 26.305220883534137 27.85322153621037 25.410949170206383 50-51 22.11174566413138 26.202858120377925 26.835013290522937 24.85038292496776 52-53 18.707098037564222 27.20537143097785 27.879432325444288 26.20809820601365 54-55 19.131615725351168 26.17838803833166 27.82072236390865 26.869273872408524 56-57 19.868342782541866 26.575964793143932 27.127651174176027 26.428041250138186 58-59 19.47404163025511 26.695111550974428 27.02255235367818 26.808294465092285 60-61 18.988014857049595 25.755553625156956 27.6166333672908 27.63979815050265 62-63 19.76706235359145 25.95083304819309 26.65517332140131 27.626931276814148 64-65 20.313302043491653 25.75015333426343 25.96758526832838 27.96895935391654 66-67 19.76899062379902 27.54581492927049 24.847195826248097 27.83799862068239 68-69 20.212698763599615 28.377204756114892 24.142441324932758 27.26765515535273 70-71 21.002392287832492 28.466382960804903 24.01051659205571 26.520708159306892 72-73 21.572575338860375 28.553230688248455 23.633109619686802 26.241084353204368 74-75 22.652092205488323 28.69972153058163 22.80159185542752 25.846594408502526 76 21.86113348176923 29.19186655507656 23.44287060284976 25.50412936030445 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.5 3 0.5 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.5 14 3.0 15 9.0 16 14.5 17 16.0 18 25.5 19 47.5 20 60.5 21 61.0 22 96.0 23 182.5 24 310.5 25 387.0 26 464.0 27 625.5 28 851.5 29 993.0 30 1227.5 31 1640.0 32 2334.5 33 2851.0 34 3239.5 35 3969.5 36 4895.5 37 5480.0 38 6147.0 39 7610.5 40 8974.0 41 10013.0 42 10485.0 43 10868.0 44 11784.5 45 12166.0 46 12014.0 47 12189.0 48 11947.5 49 11164.0 50 10797.0 51 10350.5 52 9213.5 53 7869.0 54 7215.0 55 6715.0 56 5715.0 57 4656.5 58 4098.0 59 3764.0 60 3119.5 61 2510.0 62 2211.0 63 2049.5 64 1703.0 65 1416.0 66 1189.0 67 1064.0 68 1021.5 69 886.5 70 773.5 71 753.0 72 692.0 73 609.5 74 562.0 75 536.0 76 475.0 77 395.5 78 323.0 79 269.0 80 238.5 81 188.5 82 162.0 83 155.0 84 145.0 85 114.0 86 72.5 87 52.0 88 52.5 89 39.5 90 26.0 91 22.0 92 18.0 93 19.0 94 11.5 95 4.5 96 6.0 97 7.0 98 6.5 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 5.263518030181012E-4 2 0.0 3 0.0 4 0.0 5 0.0 6 5.263518030181012E-4 7 0.00894798065130772 8 0.0015790554090543037 9 0.00842162884828962 10-11 0.0018422313105633543 12-13 5.263518030181012E-4 14-15 0.0010527036060362024 16-17 5.263518030181012E-4 18-19 0.0028949349165995567 20-21 0.0 22-23 0.0023685831135814555 24-25 0.0036844626211267086 26-27 7.895277045271518E-4 28-29 0.006053045734708165 30-31 7.895277045271518E-4 32-33 0.0 34-35 0.003947638522635759 36-37 0.020001368514687846 38-39 0.008684804749798672 40-41 0.0 42-43 2.631759015090506E-4 44-45 0.003421286719617658 46-47 0.002105407212072405 48-49 0.0 50-51 0.0010527036060362024 52-53 0.010000684257343923 54-55 0.0071057493407443665 56-57 0.01263244327243443 58-59 0.015264202287524935 60-61 0.022896303431287405 62-63 0.011579739666398227 64-65 0.022369951628269304 66-67 0.020001368514687846 68-69 0.0 70-71 7.895277045271518E-4 72-73 0.006316221636217215 74-75 0.010527036060362024 76 0.0031581108181086073 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 189987.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.06468147192098 #Duplication Level Percentage of deduplicated Percentage of total 1 74.1041863666975 43.76940163484856 2 11.433326989804552 13.506116336342458 3 6.084467587685678 10.78131419978646 4 3.365859730117376 7.952137313541948 5 1.7938423011477893 5.297636206407596 6 0.9174541653331 3.2513482824292006 7 0.57149791542171 2.36287396353751 8 0.38463603960622417 1.817472412957025 9 0.2325697210627359 1.2362990845125605 >10 1.1091775232641614 9.919734091732817 >50 0.0029816598591750603 0.1056664739038726 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0010527036060362024 0.0 2 0.0 0.0 0.0 0.0010527036060362024 0.0 3 0.0 0.0 0.0 0.0015790554090543037 0.0 4 0.0 0.0 0.0 0.002105407212072405 0.0 5 0.0 0.0 0.0 0.0031581108181086073 0.0 6 0.0 0.0 0.0 0.0031581108181086073 0.0 7 0.0 0.0 0.0 0.00421081442414481 0.0 8 0.0 0.0 0.0 0.00421081442414481 0.0 9 0.0 0.0 0.0 0.007895277045271518 0.0 10 0.0 0.0 0.0 0.007895277045271518 0.0 11 0.0 0.0 0.0 0.00894798065130772 0.0 12 0.0 0.0 0.0 0.009474332454325822 0.0 13 0.0 0.0 0.0 0.011053387863380126 0.0 14 0.0 0.0 0.0 0.011053387863380126 0.0 15 0.0 0.0 0.0 0.015790554090543037 0.0 16 0.0 0.0 0.0 0.016316905893561138 0.0 17 0.0 0.0 0.0 0.018422313105633543 0.0 18 0.0 0.0 0.0 0.019475016711669745 0.0 19 0.0 0.0 0.0 0.02579123834788696 0.0 20 0.0 0.0 0.0 0.02631759015090506 0.0 21 0.0 0.0 0.0 0.03052840457504987 0.0 22 0.0 0.0 0.0 0.04473990325653861 0.0 23 0.0 0.0 0.0 0.04737166227162911 0.0 24 0.0 0.0 0.0 0.05263518030181012 0.0 25 0.0 0.0 0.0 0.05263518030181012 0.0 26 0.0 0.0 0.0 0.060530457347081644 0.0 27 0.0 0.0 0.0 0.0852689920889324 0.0 28 0.0 0.0 0.0 0.10684941601267454 0.0 29 0.0 0.0 0.0 0.14737850484506834 0.0 30 0.0 0.0 0.0 0.20632990678309568 0.0 31 0.0 0.0 0.0 0.24633264381247139 0.0 32 0.0 0.0 0.0 0.28633538084184706 0.0 33 0.0 0.0 0.0 0.3473921899919468 0.0 34 0.0 0.0 0.0 0.42002873880844477 0.0 35 0.0 0.0 0.0 0.5305626174422461 0.0 36 0.0 0.0 0.0 0.7232073773468711 0.0 37 0.0 0.0 5.263518030181012E-4 1.0927063430655781 0.0 38 0.0 0.0 5.263518030181012E-4 1.590108796917684 0.0 39 0.0 0.0 5.263518030181012E-4 2.1338302094353825 0.0 40 0.0 0.0 5.263518030181012E-4 2.7686104838752126 0.0 41 0.0 0.0 5.263518030181012E-4 3.562349002826509 0.0 42 0.0 0.0 5.263518030181012E-4 4.4250396079731775 0.0 43 0.0 0.0 5.263518030181012E-4 5.369841094390669 0.0 44 0.0 0.0 5.263518030181012E-4 6.243585087400717 0.0 45 0.0 0.0 5.263518030181012E-4 7.145225725970724 0.0 46 0.0 0.0 5.263518030181012E-4 8.028970403238116 0.0 47 0.0 0.0 5.263518030181012E-4 8.921136709353798 0.0 48 0.0 0.0 5.263518030181012E-4 9.748561743698254 0.0 49 0.0 0.0 5.263518030181012E-4 10.512298209877518 0.0 50 0.0 0.0 5.263518030181012E-4 11.270771158026601 0.0 51 0.0 0.0 5.263518030181012E-4 12.054508992720555 0.0 52 0.0 0.0 5.263518030181012E-4 13.049840252227783 0.0 53 0.0 0.0 5.263518030181012E-4 13.991483627827167 0.0 54 0.0 0.0 5.263518030181012E-4 14.867859379852305 0.0 55 0.0 0.0 5.263518030181012E-4 15.675283045682074 0.0 56 0.0 0.0 5.263518030181012E-4 16.455862769557918 0.0 57 0.0 0.0 5.263518030181012E-4 17.18064920231384 0.0 58 0.0 0.0 5.263518030181012E-4 17.96543974061383 0.0 59 0.0 0.0 5.263518030181012E-4 18.62864301241664 0.0 60 0.0 0.0 5.263518030181012E-4 19.26289693505345 0.0 61 0.0 0.0 5.263518030181012E-4 19.936100891113604 0.0 62 0.0 0.0 5.263518030181012E-4 20.581408201613794 0.0 63 0.0 0.0 5.263518030181012E-4 21.309879096990848 0.0 64 0.0 0.0 5.263518030181012E-4 22.03782364056488 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGCTT 20 7.912055E-5 69.99921 14 CTTCCGA 30 1.0216354E-7 69.98078 18 GCCGTAT 50 9.731593E-10 56.01412 54 CGTATCA 45 2.6822818E-8 54.458168 56 GACGAAT 45 2.6877387E-8 54.44383 23 ACGAATA 45 2.6877387E-8 54.44383 24 GAGCGAC 20 0.0069434587 52.49941 26 ATCTCGA 30 5.8748934E-4 46.653854 42 TCTCGGT 105 0.0 46.653854 43 TAGATCT 160 0.0 45.92489 39 TCGGTGG 115 0.0 45.63964 45 GTGTAGA 195 0.0 44.871292 36 CGCCGTA 95 0.0 44.210026 53 TACCGAC 40 4.5805653E-5 43.749508 19 AGATCTC 185 0.0 43.501568 40 CGACGAG 105 0.0 43.332844 22 GACGATC 65 9.949872E-9 43.076435 23 CGACGAT 75 7.4942363E-10 41.999527 22 TCGCCGT 100 0.0 41.999523 52 GATCTCG 150 0.0 41.988472 41 >>END_MODULE