##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779801_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 150335 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.616742608175077 34.0 23.0 34.0 12.0 34.0 2 29.196567665546944 34.0 27.0 34.0 12.0 34.0 3 28.902258289819404 34.0 23.0 34.0 11.0 34.0 4 29.275604483320585 34.0 27.0 34.0 12.0 34.0 5 29.520045232314498 34.0 31.0 34.0 11.0 34.0 6 32.013217148368646 37.0 28.0 38.0 12.0 38.0 7 32.17508896797153 37.0 31.0 38.0 12.0 38.0 8 31.565151162403964 37.0 27.0 38.0 11.0 38.0 9 32.573918249243356 37.0 31.0 38.0 12.0 38.0 10-11 31.170106761565837 37.0 26.0 38.0 11.0 38.0 12-13 31.99500116406692 37.0 29.5 38.0 11.0 38.0 14-15 30.801629693684106 36.5 25.5 38.0 11.0 38.0 16-17 31.412112947750025 37.0 28.0 38.0 11.0 38.0 18-19 32.208753783217475 37.0 31.0 38.0 11.0 38.0 20-21 31.030551767718762 36.5 27.0 38.0 11.0 38.0 22-23 31.85331759071407 37.0 29.0 38.0 11.0 38.0 24-25 32.134925333422025 37.0 31.0 38.0 11.0 38.0 26-27 31.052256626866665 37.0 25.5 38.0 11.0 38.0 28-29 32.19864635647055 37.5 31.0 38.0 11.0 38.0 30-31 32.58934712475471 38.0 32.0 38.0 11.0 38.0 32-33 32.71367944923006 38.0 33.5 38.0 11.0 38.0 34-35 32.66366780856088 38.0 33.0 38.0 11.0 38.0 36-37 32.19604882429241 37.5 29.0 38.0 11.0 38.0 38-39 32.096893604283764 37.5 29.0 38.0 11.0 38.0 40-41 32.102038780057875 37.0 29.5 38.0 11.0 38.0 42-43 32.45753483885988 37.5 32.5 38.0 11.0 38.0 44-45 32.52092327136063 38.0 31.5 38.0 11.0 38.0 46-47 32.422187115442185 38.0 31.5 38.0 11.0 38.0 48-49 32.1352579239698 37.0 29.5 38.0 11.0 38.0 50-51 31.54776665447168 37.0 28.5 38.0 11.0 38.0 52-53 32.07014002062061 37.0 30.5 38.0 11.0 38.0 54-55 32.19442910832474 37.0 31.0 38.0 11.0 38.0 56-57 32.226208135164796 37.0 31.0 38.0 11.0 38.0 58-59 32.450144676888286 38.0 31.5 38.0 11.0 38.0 60-61 32.321112847972856 37.5 31.0 38.0 11.0 38.0 62-63 32.317936608241595 38.0 31.0 38.0 11.0 38.0 64-65 32.3358865201051 37.5 31.0 38.0 11.0 38.0 66-67 32.23956164565803 37.0 31.0 38.0 11.0 38.0 68-69 31.62191771709848 37.0 27.0 38.0 11.0 38.0 70-71 31.737689160874048 37.0 28.0 38.0 11.0 38.0 72-73 31.913483220806867 37.0 30.0 38.0 11.0 38.0 74-75 31.951255529317855 37.0 30.0 38.0 11.0 38.0 76 30.9484218578508 36.0 25.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 29.0 13 434.0 14 1617.0 15 2967.0 16 3919.0 17 4364.0 18 4382.0 19 3863.0 20 2970.0 21 2260.0 22 1779.0 23 1516.0 24 1435.0 25 1457.0 26 1514.0 27 1849.0 28 2173.0 29 2650.0 30 3046.0 31 3812.0 32 4895.0 33 6577.0 34 8912.0 35 13397.0 36 23481.0 37 45036.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 38.27876594782285 22.593691380526028 8.771801455425917 30.35574121622521 2 19.90354874114478 21.69288588818306 28.191705191738453 30.211860178933712 3 21.937007350251108 19.668074633318923 29.281271826254695 29.113646190175274 4 14.055941730136029 21.68357335284531 30.68214321348987 33.578341703528785 5 18.60777596700702 30.809192802740547 31.669937140386473 18.913094089865968 6 28.481816790947974 35.10054479781283 15.298907078380374 21.118731332858825 7 27.059981773310536 27.289478410685895 20.53895123362758 25.111588582375987 8 23.770562684174465 34.04774733425129 16.458129618912682 25.72356036266156 9 25.15782681292949 17.17634693293774 17.306732835294667 40.35909341883811 10-11 23.71384668600165 25.152994705052816 23.193332091637174 27.939826517308358 12-13 23.793939514881814 21.591517582457787 24.742823503587 29.8717193990734 14-15 25.48683103346205 23.546158732692763 21.721560919150296 29.2454493146949 16-17 26.682254180690997 24.271621855335454 21.575957534556387 27.470166429417166 18-19 23.65902899963081 23.86956651888019 23.764131457897484 28.70727302359151 20-21 25.0084810589683 23.748295473442646 23.508165097947916 27.735058369641134 22-23 27.05152211582914 23.32647081322526 22.51726993650783 27.104737134437766 24-25 24.048999358072486 26.60140957968715 21.594042380519994 27.755548681720366 26-27 24.714302819056236 26.773384596964096 22.709433661048067 25.802878922931605 28-29 23.623482454681525 25.90587061367038 24.45834026276401 26.012306668884083 30-31 24.443572312317905 25.43370095919752 24.030824697007997 26.09190203147658 32-33 22.65939402002195 26.583962483786213 24.389862640103768 26.366780856088067 34-35 22.670715523463304 27.608169998769377 23.443346493226592 26.277767984540727 36-37 24.8898099575207 24.675583882481696 23.830322303795196 26.60428385620241 38-39 24.831944652330822 24.00405794209117 25.270002827254736 25.89399457832327 40-41 22.889955399459204 24.859230582467763 25.255679833970245 26.99513418410278 42-43 21.150098114211595 24.881098879169855 25.572887218545247 28.3959157880733 44-45 20.922652209342935 23.16475694733166 28.059071028254976 27.85351981507043 46-47 21.106705958264875 24.482967358260883 27.155771674128076 27.254555009346166 48-49 21.201317058569195 25.104267136727977 26.423653839757876 27.270761964944956 50-51 23.167158351265684 25.30939544412922 24.67181300242461 26.851633202180487 52-53 18.897999234952685 26.758694097493642 26.099422888219937 28.243883779333746 54-55 19.747739836749357 25.17645571809661 25.927182496124964 29.14862194902908 56-57 20.375877324285664 25.710341615939857 25.281907993214247 28.631873066560225 58-59 20.323851087043295 25.573125948002872 25.32331887490354 28.779704090050295 60-61 19.687629946275013 24.879493022404816 25.619999667337535 29.812877363982636 62-63 21.138219494752946 24.91443396697101 24.495667647890368 29.45167889038567 64-65 21.382948996021344 24.498675998988702 23.812391052680603 30.30598395230935 66-67 20.238043756673775 27.210703320171515 22.538312869864313 30.0129400532904 68-69 21.008081950310974 28.319752552632455 21.986563341869825 28.68560215518675 70-71 20.803482934551962 28.95605090033459 22.467788176913917 27.77267798819953 72-73 21.519989356748486 29.313842878999534 21.894831370983837 27.271336393268143 74-75 22.142282182795483 29.846129283333667 21.628714550861158 26.38287398300969 76 21.48221567362252 30.880269276054523 21.390417018672377 26.24709803165058 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.0 10 1.5 11 0.5 12 0.0 13 0.5 14 2.0 15 5.5 16 10.5 17 13.0 18 22.0 19 47.0 20 93.5 21 124.0 22 133.0 23 177.0 24 249.0 25 286.0 26 362.5 27 492.0 28 678.5 29 812.0 30 917.0 31 1203.5 32 1583.0 33 1781.0 34 1994.0 35 2403.5 36 2887.0 37 3174.0 38 3504.5 39 4414.0 40 5287.0 41 6003.5 42 6426.0 43 6640.0 44 7159.0 45 7756.0 46 8048.0 47 8229.0 48 8221.0 49 7937.0 50 7842.0 51 7625.0 52 7147.0 53 6640.0 54 6394.0 55 6046.5 56 5472.5 57 4946.0 58 4646.0 59 4386.0 60 3830.0 61 3312.5 62 3091.0 63 2878.0 64 2513.5 65 2315.0 66 2079.0 67 1890.0 68 1778.0 69 1534.0 70 1411.0 71 1420.0 72 1341.5 73 1107.5 74 977.5 75 1003.0 76 890.5 77 727.5 78 601.0 79 525.0 80 514.0 81 460.0 82 376.5 83 336.0 84 310.0 85 219.5 86 150.5 87 146.0 88 108.0 89 64.5 90 51.5 91 36.0 92 28.0 93 21.0 94 12.0 95 11.5 96 13.0 97 10.0 98 6.5 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 6.651810955532643E-4 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0026607243822130574 7 0.003991086573319586 8 0.0013303621911065287 9 0.007982173146639172 10-11 0.001995543286659793 12-13 3.3259054777663217E-4 14-15 3.3259054777663217E-4 16-17 6.651810955532643E-4 18-19 0.0036584960255429543 20-21 0.0 22-23 9.977716433298965E-4 24-25 0.004323677121096218 26-27 6.651810955532643E-4 28-29 0.0066518109555326445 30-31 6.651810955532643E-4 32-33 0.0 34-35 0.00299331492998969 36-37 0.01762729903216151 38-39 0.008314763694415804 40-41 3.3259054777663217E-4 42-43 0.0 44-45 0.004988858216649483 46-47 0.003991086573319586 48-49 0.0 50-51 9.977716433298965E-4 52-53 0.011640669172182127 54-55 0.009312535337745701 56-57 0.013303621911065289 58-59 0.012638440815512025 60-61 0.021618385605481093 62-63 0.008314763694415804 64-65 0.021950976153257723 66-67 0.01762729903216151 68-69 0.0 70-71 0.0013303621911065287 72-73 0.0033259054777663223 74-75 0.009312535337745701 76 0.003991086573319586 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 150335.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.45087272868908 #Duplication Level Percentage of deduplicated Percentage of total 1 79.33864265660416 55.10137973610757 2 9.90970836396787 13.764757887287162 3 5.280212161516667 11.00146028429911 4 2.6533274208596183 7.371036200546488 5 1.3161193438564538 4.570281852297016 6 0.6345734060900782 2.6443006118023646 7 0.34077083007621245 1.6566782084490934 8 0.17288373140772917 0.9605540821487251 9 0.09993279255835442 0.6246377691653483 >10 0.2538292930628464 2.304913367897122 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0013303621911065287 0.0 2 0.0 0.0 0.0 0.0026607243822130574 0.0 3 0.0 0.0 0.0 0.003325905477766322 0.0 4 0.0 0.0 0.0 0.006651810955532644 0.0 5 0.0 0.0 0.0 0.007982173146639172 0.0 6 0.0 0.0 0.0 0.007982173146639172 0.0 7 0.0 0.0 0.0 0.008647354242192437 0.0 8 0.0 0.0 0.0 0.008647354242192437 0.0 9 0.0 0.0 0.0 0.012638440815512023 0.0 10 0.0 0.0 0.0 0.015299165197725081 0.0 11 0.0 0.0 0.0 0.015964346293278343 0.0 12 0.0 0.0 0.0 0.018625070675491403 0.0 13 0.0 0.0 0.0 0.020620613962151195 0.0 14 0.0 0.0 0.0 0.020620613962151195 0.0 15 0.0 0.0 0.0 0.024611700535470783 0.0 16 0.0 0.0 0.0 0.025276881631024047 0.0 17 0.0 0.0 0.0 0.026607243822130575 0.0 18 0.0 0.0 0.0 0.02727242491768384 0.0 19 0.0 0.0 0.0 0.03192869258655669 0.0 20 0.0 0.0 0.0 0.03458941696876975 0.0 21 0.0 0.0 0.0 0.0392456846376426 0.0 22 0.0 0.0 0.0 0.049223401070941565 0.0 23 0.0 0.0 0.0 0.05055376326204809 0.0 24 0.0 0.0 0.0 0.06319220407756011 0.0 25 0.0 0.0 0.0 0.0691788339375395 0.0 26 0.0 0.0 0.0 0.07716100708417867 0.0 27 0.0 0.0 0.0 0.1436791166395051 0.0 28 0.0 0.0 0.0 0.20088469085708585 0.0 29 0.0 0.0 0.0 0.2487777297369209 0.0 30 0.0 0.0 0.0 0.2953404064256494 0.0 31 0.0 0.0 0.0 0.35520670502544316 0.0 32 0.0 0.0 0.0 0.41773372800745 0.0 33 0.0 0.0 0.0 0.4709482156517112 0.0 34 0.0 0.0 0.0 0.5673994745069345 0.0 35 0.0 0.0 0.0 0.7177304021019723 0.0 36 0.0 0.0 0.0 0.9731599427944257 0.0 37 0.0 0.0 0.0 1.4421126151594772 0.0 38 0.0 0.0 0.0 1.9742574916020887 0.0 39 0.0 0.0 0.0 2.6307912329131606 0.0 40 0.0 0.0 0.0 3.3259054777663217 0.0 41 0.0 0.0 0.0 4.269132271260851 0.0 42 0.0 0.0 0.0 5.254930654870789 0.0 43 0.0 0.0 0.0 6.323211494329331 0.0 44 0.0 0.0 0.0 7.14404496624206 0.0 45 0.0 0.0 0.0 7.890378155452822 0.0 46 0.0 0.0 0.0 8.677952572587888 0.0 47 0.0 0.0 0.0 9.421625037416437 0.0 48 0.0 0.0 0.0 10.16197159676722 0.0 49 0.0 0.0 0.0 10.821831243556058 0.0 50 0.0 0.0 0.0 11.49033824458709 0.0 51 0.0 0.0 0.0 12.257957228855556 0.0 52 0.0 0.0 0.0 13.171250873050187 0.0 53 0.0 0.0 0.0 13.986097715102936 0.0 54 0.0 0.0 0.0 14.745069345129211 0.0 55 0.0 0.0 0.0 15.42355406259354 0.0 56 0.0 0.0 0.0 16.10203878005787 0.0 57 0.0 0.0 0.0 16.67675524661589 0.0 58 0.0 0.0 0.0 17.31067283067815 0.0 59 0.0 0.0 0.0 17.826853360827485 0.0 60 0.0 0.0 0.0 18.339042804403498 0.0 61 0.0 0.0 0.0 18.906442278910433 0.0 62 0.0 0.0 0.0 19.411979911530914 0.0 63 0.0 0.0 0.0 19.943459606877973 0.0 64 0.0 0.0 0.0 20.53746632520704 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAT 20 7.892839E-5 70.02397 57 CGAATGG 15 0.0022210483 70.00066 32 GTATCGG 15 0.0022239825 69.97738 1 CGATACA 15 0.0022239825 69.97738 25 ACGATAC 45 2.6893758E-8 54.426853 24 TTTGCCG 20 0.0069309454 52.51798 55 CTACGTG 20 0.006940078 52.500504 32 TTGGTAA 20 0.006940078 52.500504 33 GGCTCGT 20 0.006940078 52.500504 33 GACATAG 20 0.00694922 52.483036 1 TCGCCGT 55 2.2646418E-9 50.909573 52 TACGTGT 35 2.0786223E-5 50.000477 33 AGATCTC 75 1.4551915E-11 46.66711 40 TGGTCGC 60 4.8912625E-9 46.667107 49 TCTCGGT 70 3.8016879E-10 45.000427 43 TAGATCT 80 2.910383E-11 43.75042 39 CCGTATC 50 3.452511E-6 42.01438 55 ACGTGTA 50 3.460429E-6 42.0004 34 CGTGTAG 50 3.460429E-6 42.0004 35 GCCGTAT 60 2.5727968E-7 40.847313 54 >>END_MODULE