##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779796_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 125260 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.120557240938847 34.0 23.0 34.0 12.0 34.0 2 28.714873064026825 34.0 23.0 34.0 12.0 34.0 3 28.416525626696473 34.0 23.0 34.0 11.0 34.0 4 28.681542391825005 34.0 23.0 34.0 12.0 34.0 5 28.74461120868593 34.0 23.0 34.0 11.0 34.0 6 31.415711320453457 37.0 27.0 38.0 12.0 38.0 7 31.722696790675396 37.0 27.0 38.0 12.0 38.0 8 31.0942599393262 37.0 26.0 38.0 11.0 38.0 9 31.836867315982754 37.0 28.0 38.0 12.0 38.0 10-11 30.51826201500878 36.5 25.0 38.0 11.0 38.0 12-13 31.225159667890786 37.0 26.5 38.0 11.0 38.0 14-15 30.13845601149609 36.5 24.5 38.0 11.0 38.0 16-17 30.66591090531694 36.5 25.0 38.0 11.0 38.0 18-19 31.343174197668848 37.0 27.0 38.0 11.0 38.0 20-21 30.325307360689767 36.5 24.0 38.0 11.0 38.0 22-23 31.069120229921765 37.0 25.5 38.0 11.0 38.0 24-25 31.353428867954655 37.0 26.5 38.0 11.0 38.0 26-27 30.338799297461282 37.0 23.5 38.0 11.0 38.0 28-29 31.312218585342485 37.0 26.5 38.0 11.0 38.0 30-31 31.63443238064825 38.0 27.0 38.0 11.0 38.0 32-33 31.760729682260894 38.0 27.0 38.0 11.0 38.0 34-35 31.72983394539358 38.0 27.0 38.0 11.0 38.0 36-37 31.303544627175476 37.0 26.5 38.0 11.0 38.0 38-39 31.230372824524988 37.0 26.5 38.0 11.0 38.0 40-41 31.225626696471338 37.0 26.0 38.0 11.0 38.0 42-43 31.54053967747086 37.0 26.5 38.0 11.0 38.0 44-45 31.617978604502635 37.0 27.0 38.0 11.0 38.0 46-47 31.51715631486508 37.0 26.5 38.0 11.0 38.0 48-49 31.24095481398691 37.0 26.5 38.0 11.0 38.0 50-51 30.705684176912023 37.0 24.5 38.0 11.0 38.0 52-53 31.205013571770717 37.0 26.0 38.0 11.0 38.0 54-55 31.310418329873862 37.0 26.5 38.0 11.0 38.0 56-57 31.363356219064347 37.0 26.5 38.0 11.0 38.0 58-59 31.51277742296024 37.0 26.5 38.0 11.0 38.0 60-61 31.465471818617274 37.0 26.5 38.0 11.0 38.0 62-63 31.438112725530896 37.0 27.0 38.0 11.0 38.0 64-65 31.406143222098038 37.0 26.5 38.0 11.0 38.0 66-67 31.400231518441643 37.0 26.5 38.0 11.0 38.0 68-69 30.85845441481718 37.0 24.5 38.0 11.0 38.0 70-71 30.993613284368514 37.0 25.0 38.0 11.0 38.0 72-73 31.129191282133164 37.0 25.0 38.0 11.0 38.0 74-75 31.120369631167172 37.0 25.0 38.0 11.0 38.0 76 30.240866996646975 36.0 24.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 44.0 13 459.0 14 1593.0 15 2969.0 16 3847.0 17 4583.0 18 4656.0 19 4226.0 20 3362.0 21 2535.0 22 1862.0 23 1422.0 24 1314.0 25 1295.0 26 1221.0 27 1448.0 28 1548.0 29 1944.0 30 2251.0 31 2753.0 32 3677.0 33 4474.0 34 6711.0 35 9891.0 36 17933.0 37 37241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.54398850391186 18.94539358135079 9.541753153440844 34.9688647612965 2 19.812390228325082 21.13523870349673 32.710362446112086 26.342008622066103 3 16.749960083027304 20.58198946191921 34.63595720900527 28.032093246048216 4 12.411783490340092 26.785885358454415 28.64282292830912 32.15950822289638 5 16.843365799137793 31.844962478045662 33.28037681622226 18.031294906594283 6 25.04550680206936 37.58861850929297 16.126971961423006 21.238902727214665 7 24.466267465069862 32.359281437125745 17.970459081836328 25.203992015968062 8 21.542109423026258 40.55422052260552 16.316054192580058 21.587615861788166 9 22.727272727272727 19.555913961324116 17.640483528416077 40.07632978298708 10-11 21.815547234885077 27.8842699410013 23.561158258620278 26.739024565493345 12-13 21.931183139070733 23.532252913939004 25.613923040076642 28.92264090691362 14-15 24.431874882742488 25.482502185480428 21.49874060443004 28.586882327347045 16-17 25.758228949616395 25.929474129603463 21.728179212671346 26.5841177081088 18-19 21.70637946245015 25.79289201499359 24.4100963246536 28.090632197902654 20-21 24.375299377295224 25.18880728085582 23.65759220820693 26.778301133642024 22-23 26.07569267862346 24.997505119494797 22.096258477603957 26.830543724277785 24-25 21.789462338979128 28.6023368235327 21.948736782017555 27.659464055470618 26-27 23.86694768439793 28.562817841432555 22.962421861902136 24.60781261226738 28-29 22.103481451023757 27.891528509095842 24.7609770897289 25.244012950151497 30-31 23.046156179770797 27.08816496952327 24.406931210806366 25.45874763989957 32-33 21.442998562988983 28.26041832987386 24.754909787641704 25.54167331949545 34-35 21.228040061793198 29.701053438344516 23.951651211713564 25.119255288148718 36-37 24.089097921474373 25.730438462705518 24.683190532846773 25.497273082973336 38-39 24.211139855003033 24.867857941298585 25.87628948292932 25.04471272076906 40-41 21.851386144542243 26.84110731892302 25.41045446380456 25.897052072730176 42-43 19.66469742934696 26.333226888072808 26.58031294906594 27.42176273351429 44-45 19.557372337367866 24.538131127646665 28.186376265448853 27.718120269536616 46-47 20.39151973366439 25.625621230205457 26.98164950840482 27.00120952772533 48-49 20.505748044068337 26.42064505827878 26.503273191761135 26.57033370589175 50-51 23.39092113876958 26.23425250283415 24.495840585032493 25.878985773363777 52-53 18.087055808178597 27.860573372244822 25.971423210357592 28.08094760921899 54-55 18.961105322618636 26.159195519307616 25.711285963504555 29.168413194569197 56-57 19.750883286424337 27.227578497714433 24.849392179172405 28.172146036688822 58-59 19.391735167656087 27.16072547837578 25.301118239561166 28.146421114406966 60-61 18.39006568308411 25.83161971690391 25.693465631176505 30.08484896883547 62-63 19.67527905082797 26.10622295322805 24.963671494498826 29.25482650144516 64-65 20.204907887276704 25.589130139666366 24.437222004839214 29.768739968217716 66-67 19.25418721178608 28.562074541353084 22.782424690076457 29.40131355678438 68-69 19.839292984935213 30.12078972369251 21.886251686505563 28.153665604866717 70-71 19.366594948886114 30.92939058514524 22.324055261277586 27.379959204691062 72-73 20.154645759816052 30.939131684417266 21.89031887205199 27.015903683714694 74-75 20.92879355840589 30.92172760552023 21.608242813287184 26.541236022786702 76 20.30817133048581 32.62145223743563 20.85745080036725 26.212925631711308 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 1.0 10 1.5 11 1.5 12 1.0 13 2.0 14 4.0 15 3.0 16 2.5 17 4.0 18 11.0 19 29.0 20 42.0 21 44.0 22 74.5 23 121.0 24 198.0 25 259.0 26 324.5 27 451.5 28 619.0 29 725.0 30 869.0 31 1155.0 32 1450.0 33 1603.0 34 1874.5 35 2401.0 36 2891.0 37 3126.0 38 3579.5 39 4515.5 40 5335.5 41 6029.0 42 6385.0 43 6564.0 44 7079.5 45 7391.5 46 7367.0 47 7437.5 48 7489.0 49 7197.0 50 6924.0 51 6645.0 52 6081.5 53 5364.5 54 4932.0 55 4557.5 56 3961.0 57 3417.0 58 3095.0 59 2930.0 60 2521.0 61 2055.5 62 1834.0 63 1710.0 64 1546.0 65 1366.0 66 1129.0 67 1032.0 68 1003.0 69 893.0 70 742.0 71 672.0 72 646.5 73 579.0 74 530.5 75 524.0 76 457.0 77 379.0 78 338.5 79 309.0 80 292.0 81 240.0 82 181.0 83 157.0 84 142.5 85 115.0 86 83.5 87 65.0 88 64.5 89 49.0 90 22.5 91 15.5 92 20.0 93 17.0 94 12.0 95 9.0 96 8.0 97 5.0 98 3.0 99 6.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.003193357815743254 7 0.007983394539358136 8 0.0023950183618074404 9 0.01117675235510139 10-11 0.0023950183618074404 12-13 0.0 14-15 0.0011975091809037202 16-17 7.983394539358135E-4 18-19 0.005189206450582787 20-21 0.0 22-23 0.0027941880887753473 24-25 0.0035925275427111606 26-27 7.983394539358135E-4 28-29 0.008382564266326041 30-31 3.9916972696790677E-4 32-33 0.0 34-35 0.0027941880887753473 36-37 0.021555165256266964 38-39 0.012773431262973017 40-41 0.001995848634839534 42-43 0.0 44-45 0.006386715631486508 46-47 0.0035925275427111606 48-49 0.0 50-51 0.001596678907871627 52-53 0.01476927989781255 54-55 0.009180903720261854 56-57 0.013970940443876737 58-59 0.01476927989781255 60-61 0.029937729522593007 62-63 0.01117675235510139 64-65 0.026345201979881848 66-67 0.02195433498323487 68-69 7.983394539358135E-4 70-71 3.9916972696790677E-4 72-73 0.004790036723614881 74-75 0.009180903720261854 76 0.003991697269679068 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 125260.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.21395497365481 #Duplication Level Percentage of deduplicated Percentage of total 1 82.08754974417283 57.63691521634999 2 7.750994883456509 10.88456011496088 3 4.503695281409891 9.486667731119272 4 2.5264354747015347 7.095641066581511 5 1.3189312109152929 4.630368832827719 6 0.7254121660034111 3.0560434296662944 7 0.3479249573621376 1.7100431103305125 8 0.2376350198976691 1.3348235669806803 9 0.14326321773735076 0.9053169407632126 >10 0.35815804434337695 3.2596199904199263 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.001596678907871627 0.0 2 0.0 0.0 0.0 0.005588376177550695 0.0 3 0.0 0.0 0.0 0.005588376177550695 0.0 4 0.0 0.0 0.0 0.005588376177550695 0.0 5 0.0 0.0 0.0 0.007185055085422321 0.0 6 0.0 0.0 0.0 0.007185055085422321 0.0 7 0.0 0.0 0.0 0.008781733993293949 0.0 8 0.0 0.0 0.0 0.008781733993293949 0.0 9 0.0 0.0 0.0 0.01117675235510139 0.0 10 0.0 0.0 0.0 0.01117675235510139 0.0 11 0.0 0.0 0.0 0.011975091809037202 0.0 12 0.0 0.0 0.0 0.011975091809037202 0.0 13 0.0 0.0 0.0 0.011975091809037202 0.0 14 0.0 0.0 0.0 0.011975091809037202 0.0 15 0.0 0.0 0.0 0.011975091809037202 0.0 16 0.0 0.0 0.0 0.011975091809037202 0.0 17 0.0 0.0 0.0 0.01357177071690883 0.0 18 0.0 0.0 0.0 0.017563467986587897 0.0 19 0.0 0.0 0.0 0.017563467986587897 0.0 20 0.0 0.0 0.0 0.021555165256266964 0.0 21 0.0 0.0 0.0 0.02474852307201022 0.0 22 0.0 0.0 0.0 0.030336899249560914 0.0 23 0.0 0.0 0.0 0.03193357815743254 0.0 24 0.0 0.0 0.0 0.035126935973175795 0.0 25 0.0 0.0 0.0 0.03911863324285486 0.0 26 0.0 0.0 0.0 0.046303688328277186 0.0 27 0.0 0.0 0.0 0.07264889030815903 0.0 28 0.0 0.0 0.0 0.10378412901165576 0.0 29 0.0 0.0 0.0 0.13172600989940922 0.0 30 0.0 0.0 0.0 0.1716429825961999 0.0 31 0.0 0.0 0.0 0.20437490020756827 0.0 32 0.0 0.0 0.0 0.2363084783650008 0.0 33 0.0 0.0 0.0 0.295385597956251 0.0 34 0.0 0.0 0.0 0.3792112406195114 0.0 35 0.0 0.0 0.0 0.4981638192559476 0.0 36 0.0 0.0 0.0 0.676193517483634 0.0 37 0.0 0.0 0.0 0.9867475650646655 0.0 38 0.0 0.0 0.0 1.4058757783809677 0.0 39 0.0 0.0 0.0 1.9311831390707328 0.0 40 0.0 0.0 0.0 2.5778380967587418 0.0 41 0.0 0.0 0.0 3.28756187130768 0.0 42 0.0 0.0 0.0 4.017244132205014 0.0 43 0.0 0.0 0.0 4.8674756506466546 0.0 44 0.0 0.0 0.0 5.609133003353025 0.0 45 0.0 0.0 0.0 6.342806961520038 0.0 46 0.0 0.0 0.0 7.047740699345361 0.0 47 0.0 0.0 0.0 7.795784767683219 0.0 48 0.0 0.0 0.0 8.58135079035606 0.0 49 0.0 0.0 0.0 9.215232316781096 0.0 50 0.0 0.0 0.0 9.8818457608175 0.0 51 0.0 0.0 0.0 10.607536324445155 0.0 52 0.0 0.0 0.0 11.31406674117835 0.0 53 0.0 0.0 0.0 11.97189845122146 0.0 54 0.0 0.0 0.0 12.61057001437011 0.0 55 0.0 0.0 0.0 13.25323327478844 0.0 56 0.0 0.0 0.0 13.835222736707648 0.0 57 0.0 0.0 0.0 14.47549097876417 0.0 58 0.0 0.0 0.0 15.061472137953057 0.0 59 0.0 0.0 0.0 15.557240938847197 0.0 60 0.0 0.0 0.0 16.0833466389909 0.0 61 0.0 0.0 0.0 16.610250678588535 0.0 62 0.0 0.0 0.0 17.26329235190803 0.0 63 0.0 0.0 0.0 17.80137314386077 0.0 64 0.0 0.0 0.0 18.377774229602426 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGATC 35 3.6779966E-9 70.0 23 ACGATCT 35 2.9544572E-7 60.0 24 CTGTGTA 60 1.8189894E-12 58.333336 34 ATCTCGG 105 0.0 56.666664 42 TAGATCT 125 0.0 56.0 39 TCGGTGG 75 0.0 56.0 45 AGCCGTA 25 2.3827922E-4 55.999996 53 GATCTCG 100 0.0 55.999996 41 CGATCTA 25 2.3827922E-4 55.999996 25 CGACGAT 95 0.0 55.26316 22 CAGCCGT 20 0.0069376566 52.5 12 CCGGACC 20 0.0069376566 52.5 53 AACGGAC 20 0.0069376566 52.5 35 ACGTGGG 20 0.0069376566 52.5 14 TTACGTG 20 0.0069376566 52.5 12 CGGTATA 20 0.0069376566 52.5 67 CGACTAT 20 0.0069376566 52.5 22 CGTTTTC 20 0.0069376566 52.5 40 GCCGTAA 20 0.0069376566 52.5 54 GGTAGCC 20 0.0069376566 52.5 50 >>END_MODULE