SRR1779794_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779794_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	399005
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTCGGT	20	0.0069516306	52.494457	43
GCCGTAT	55	1.3082354E-7	44.551918	54
TCTCGGT	105	0.0	39.995773	43
TGGTCGC	115	0.0	39.570957	49
CGCCGTA	100	7.2759576E-12	38.505585	53
CGGTGGT	110	0.0	38.18257	46
GTAGATC	205	0.0	37.561718	38
GGTCGCC	115	1.8189894E-12	36.52704	50
TCGCCGT	80	6.225673E-8	35.005077	52
ACGTGTA	60	1.2133531E-5	35.005077	34
CTCGGTG	110	2.3646862E-11	34.996304	44
GTTCGAT	40	0.0024187998	34.996304	43
TCGGTGG	120	1.8189894E-12	34.996304	45
GATCTCG	155	0.0	33.86739	41
TAGATCT	235	0.0	32.766605	39
ACGCTTC	55	2.9940318E-4	31.810835	15
TCGATCT	45	0.0043047075	31.111723	39
CGGTCAA	45	0.004307349	31.107824	9
ATCTCGG	135	7.2759576E-12	31.107822	42
TGCCGCT	90	1.7573984E-7	31.103926	13