##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779792_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 65131 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 22.859083999938587 23.0 12.0 33.0 12.0 34.0 2 23.19864580614454 23.0 12.0 34.0 12.0 34.0 3 23.0780273602432 23.0 11.0 34.0 11.0 34.0 4 23.762693648185962 23.0 12.0 34.0 12.0 34.0 5 22.802275414165297 23.0 11.0 34.0 11.0 34.0 6 24.64734151172253 26.0 12.0 37.0 11.0 38.0 7 24.956840828484133 26.0 12.0 37.0 11.0 38.0 8 25.198599745129048 26.0 11.0 37.0 11.0 38.0 9 25.454791113294746 27.0 12.0 37.0 11.0 38.0 10-11 24.550122061691052 26.0 11.5 36.0 11.0 38.0 12-13 24.619067725046445 26.0 11.0 37.0 11.0 38.0 14-15 23.967196880133883 25.5 11.0 35.0 11.0 38.0 16-17 24.05268612488677 24.5 11.0 36.0 11.0 38.0 18-19 24.001404860972503 25.0 11.0 37.0 11.0 38.0 20-21 23.968294667669774 24.5 11.0 35.0 11.0 38.0 22-23 24.182486066542815 24.5 11.0 36.5 11.0 38.0 24-25 24.421895871397645 26.0 11.0 37.0 11.0 38.0 26-27 23.70447252460426 23.0 11.0 36.0 10.5 38.0 28-29 23.890382459965302 23.5 11.0 36.5 11.0 38.0 30-31 23.948181357571663 24.0 11.0 37.0 11.0 38.0 32-33 24.182777786307597 26.0 11.0 37.0 11.0 38.0 34-35 24.250825259860896 26.0 11.0 37.0 11.0 38.0 36-37 24.026538821759225 25.5 11.0 37.0 11.0 38.0 38-39 23.893698853080714 24.5 11.0 37.0 11.0 38.0 40-41 23.825344306090802 24.5 11.0 36.5 11.0 38.0 42-43 24.02137231118822 25.5 11.0 37.0 11.0 38.0 44-45 24.169757872595234 25.5 11.0 37.0 11.0 38.0 46-47 24.081735271990297 25.0 11.0 37.0 11.0 38.0 48-49 23.722528442677067 24.0 11.0 36.5 11.0 38.0 50-51 23.477445456080822 23.0 11.0 36.5 11.0 38.0 52-53 23.872679676344596 24.5 11.0 36.5 11.0 38.0 54-55 23.847530361886044 24.0 11.0 37.0 11.0 38.0 56-57 23.864181418986348 23.5 11.0 37.0 11.0 38.0 58-59 23.714644332192044 23.5 11.0 37.0 11.0 38.0 60-61 23.95252644669973 24.0 11.0 37.0 11.0 38.0 62-63 23.708648723342186 23.5 11.0 37.0 11.0 38.0 64-65 23.67005726919593 23.5 11.0 37.0 11.0 38.0 66-67 23.975004222259756 24.0 11.0 37.0 11.0 38.0 68-69 23.770301392578034 24.0 11.0 36.0 11.0 38.0 70-71 23.945448403985814 24.5 11.0 36.0 11.0 38.0 72-73 23.71718536488001 23.5 11.0 36.0 11.0 38.0 74-75 23.571425281356035 23.5 11.0 36.5 11.0 38.0 76 23.155363805254026 23.0 11.0 35.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 67.0 13 794.0 14 2590.0 15 4160.0 16 5387.0 17 6250.0 18 6484.0 19 5633.0 20 4286.0 21 3101.0 22 2099.0 23 1441.0 24 1061.0 25 776.0 26 686.0 27 576.0 28 555.0 29 561.0 30 586.0 31 647.0 32 742.0 33 1008.0 34 1423.0 35 2050.0 36 3740.0 37 8426.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.44505688535413 21.854416483702078 16.632632694108796 38.067893936835 2 12.99381247025226 24.04538545393131 37.49213124318681 25.468670832629627 3 11.5321429119774 21.567302820469518 33.90090740200519 32.999646865547895 4 9.807925565398966 40.77167554620688 20.454161612749687 28.966237275644467 5 9.553054613010701 41.878675285194454 27.963642505105096 20.60462759668975 6 23.12641066191712 42.65381013066376 12.318629182084786 21.90115002533434 7 16.66692256905526 29.845383776812174 20.29817746318844 33.189516190944126 8 13.578995854444956 49.72823583602027 12.795946568401659 23.896821741133117 9 18.34722925975402 23.785833832358318 13.90360372810048 43.963333179787185 10-11 15.580377706126209 34.9355135882082 21.034853370182713 28.44925533548288 12-13 15.164053983510156 26.05594878015077 24.815372096236814 33.96462514010226 14-15 25.938493190646543 29.347008337043807 17.824077628164776 26.89042084414488 16-17 26.97891156984823 26.348638502698428 16.850016505323925 29.822433422129418 18-19 18.064639950867495 26.44633809304468 22.330723169046525 33.1582987870413 20-21 25.488630606009426 25.001151525387293 18.438992184981036 31.071225683622238 22-23 27.234761246737293 24.8533701827115 16.899278366344234 31.01259020420697 24-25 17.763839734682442 33.16930116153202 16.649905188892898 32.41695391489264 26-27 24.24670469288582 32.64292458986189 17.884094241561176 25.22627647569111 28-29 18.861174447438525 31.284307177349397 21.574272399947795 28.280245975264286 30-31 21.049884079777677 29.23339116549723 21.416836836529455 28.299887918195637 32-33 17.966099092597997 31.742181142620257 21.358492883573106 28.93322688120864 34-35 16.82110257256696 35.196800221097966 20.113773328522406 27.868323877812667 36-37 23.164804790970862 26.40945909631848 21.927137318131216 28.498598794579443 38-39 24.09350888641511 23.669724770642205 24.9502898161299 27.28647652681279 40-41 19.132978151724984 30.364189095822265 21.89126529609556 28.61156745635719 42-43 14.280450169658074 29.608788441755845 24.370883296740413 31.739878091845664 44-45 14.413480730846 25.270228773222787 27.954859511745738 32.361430984185475 46-47 17.391504617723154 28.755786548338307 23.42333351246363 30.429375321474904 48-49 18.798268105817506 29.018439759868574 22.30044065038154 29.88285148393238 50-51 25.944066144126023 27.900138951796777 17.894074204865614 28.261720699211583 52-53 13.240081071121484 32.244963763665396 22.081132539000123 32.433822626212994 54-55 16.33398845350694 27.40526348114482 21.348728657413094 34.91201940793514 56-57 18.50796916746 29.753094002395358 19.10604059822498 32.63289623191966 58-59 16.98707121579707 29.88821668765163 20.557841722200042 32.56687037435126 60-61 14.282094789131419 27.640559859344172 21.705682280589954 36.37166307093446 62-63 16.758794355643587 28.97569364472492 20.391696224300212 33.87381577533128 64-65 17.259011862259587 27.51122883795923 20.43686897769588 34.7928903220853 66-67 14.595569887519675 35.95761833467696 16.673960612691467 32.7728511651119 68-69 15.641553177442386 39.00523560209424 15.117992968018301 30.235218252445073 70-71 14.204449494096513 39.96944619305707 16.74548218206384 29.080622130782572 72-73 15.842161830185782 39.49792722247812 16.688162137263934 27.97174881007216 74-75 17.308755335810584 38.63050087522649 15.655037926480976 28.405705862481955 76 15.542760632580993 42.08659603869185 14.076462459695993 28.294180869031166 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 0.5 12 0.0 13 0.5 14 1.0 15 8.0 16 12.5 17 10.0 18 11.0 19 15.5 20 35.0 21 51.0 22 57.0 23 67.0 24 102.5 25 134.0 26 149.5 27 180.0 28 263.0 29 331.0 30 364.0 31 501.5 32 692.5 33 779.0 34 867.0 35 1085.0 36 1389.0 37 1563.0 38 1739.5 39 2087.0 40 2489.5 41 2902.0 42 3083.0 43 3251.5 44 3584.5 45 3875.0 46 4001.0 47 4010.5 48 3964.0 49 3811.5 50 3715.0 51 3663.0 52 3440.5 53 3097.5 54 2925.0 55 2764.5 56 2463.5 57 2151.0 58 1979.0 59 1815.5 60 1547.0 61 1283.0 62 1124.0 63 1054.0 64 878.0 65 682.0 66 535.0 67 478.0 68 444.0 69 389.5 70 324.0 71 279.0 72 234.5 73 176.5 74 141.0 75 119.0 76 112.5 77 87.5 78 69.5 79 70.0 80 54.0 81 34.0 82 31.5 83 33.0 84 29.5 85 16.5 86 13.5 87 20.0 88 15.0 89 10.5 90 10.5 91 8.0 92 6.0 93 7.0 94 6.0 95 4.5 96 5.0 97 5.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.003070734366123658 7 0.003070734366123658 8 0.001535367183061829 9 0.006141468732247316 10-11 0.001535367183061829 12-13 0.0 14-15 0.0 16-17 7.676835915309145E-4 18-19 0.001535367183061829 20-21 0.0 22-23 0.001535367183061829 24-25 0.0023030507745927437 26-27 7.676835915309145E-4 28-29 0.003838417957654573 30-31 0.0 32-33 0.0 34-35 0.0023030507745927437 36-37 0.01305062105602555 38-39 0.005373785140716402 40-41 0.0 42-43 0.0 44-45 0.001535367183061829 46-47 0.0023030507745927437 48-49 0.0 50-51 7.676835915309145E-4 52-53 0.0046061015491854875 54-55 0.0046061015491854875 56-57 0.007676835915309146 58-59 0.007676835915309146 60-61 0.01151525387296372 62-63 0.006141468732247316 64-65 0.01305062105602555 66-67 0.01305062105602555 68-69 0.0 70-71 0.0 72-73 0.001535367183061829 74-75 0.007676835915309146 76 0.001535367183061829 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 65131.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.73088084015292 #Duplication Level Percentage of deduplicated Percentage of total 1 94.00770038501925 82.47378360534921 2 2.4361218060903043 4.274462237644133 3 1.536576828841442 4.044157160184858 4 0.9327966398319916 3.2734028342878196 5 0.4497724886244312 1.9729468302344506 6 0.33776688834441726 1.7779551979855983 7 0.1662583129156458 1.0210191767361165 8 0.05775288764438222 0.4053369363283229 9 0.028001400070003502 0.2210928743609034 >10 0.04725236261813091 0.5358431468885784 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009212203098370975 0.0 2 0.0 0.0 0.0 0.013818304647556463 0.0 3 0.0 0.0 0.0 0.013818304647556463 0.0 4 0.0 0.0 0.0 0.01688903901368012 0.0 5 0.0 0.0 0.0 0.03224271084429842 0.0 6 0.0 0.0 0.0 0.03224271084429842 0.0 7 0.0 0.0 0.0 0.03224271084429842 0.0 8 0.0 0.0 0.0 0.03224271084429842 0.0 9 0.0 0.0 0.0 0.03224271084429842 0.0 10 0.0 0.0 0.0 0.03377807802736024 0.0 11 0.0 0.0 0.0 0.03377807802736024 0.0 12 0.0 0.0 0.0 0.03377807802736024 0.0 13 0.0 0.0 0.0 0.03377807802736024 0.0 14 0.0 0.0 0.0 0.03377807802736024 0.0 15 0.0 0.0 0.0 0.03377807802736024 0.0 16 0.0 0.0 0.0 0.03377807802736024 0.0 17 0.0 0.0 0.0 0.03377807802736024 0.0 18 0.0 0.0 0.0 0.042990281125731215 0.0 19 0.0 0.0 0.0 0.047596382674916705 0.0 20 0.0 0.0 0.0 0.052202484224102196 0.0 21 0.0 0.0 0.0 0.06602078887165866 0.0 22 0.0 0.0 0.0 0.09672813253289524 0.0 23 0.0 0.0 0.0 0.09672813253289524 0.0 24 0.0 0.0 0.0 0.1105464371804517 0.0 25 0.0 0.0 0.0 0.11975864027882269 0.0 26 0.0 0.0 0.0 0.12129400746188451 0.0 27 0.0 0.0 0.0 0.12590010901107 0.0 28 0.0 0.0 0.0 0.13818304647556462 0.0 29 0.0 0.0 0.0 0.14278914802475012 0.0 30 0.0 0.0 0.0 0.17042575731986304 0.0 31 0.0 0.0 0.0 0.18731479633354317 0.0 32 0.0 0.0 0.0 0.20420383534722328 0.0 33 0.0 0.0 0.0 0.22723434309315071 0.0 34 0.0 0.0 0.0 0.2932551319648094 0.0 35 0.0 0.0 0.0 0.36541738956871533 0.0 36 0.0 0.0 0.0 0.5511968187191967 0.0 37 0.0 0.0 0.0 0.7692189587139765 0.0 38 0.0 0.0 0.0 0.997988668990189 0.0 39 0.0 0.0 0.0 1.2789608634905039 0.0 40 0.0 0.0 0.0 1.5184781440481492 0.0 41 0.0 0.0 0.0 1.7595307917888563 0.0 42 0.0 0.0 0.0 2.1372311188220663 0.0 43 0.0 0.0 0.0 2.4980424068415963 0.0 44 0.0 0.0 0.0 2.849641491762755 0.0 45 0.0 0.0 0.0 3.141361256544503 0.0 46 0.0 0.0 0.0 3.5390213569575164 0.0 47 0.0 0.0 0.0 3.8353472232884496 0.0 48 0.0 0.0 0.0 4.1854109410265465 0.0 49 0.0 0.0 0.0 4.475595338625232 0.0 50 0.0 0.0 0.0 4.738143126928805 0.0 51 0.0 0.0 0.0 5.200288649030416 0.0 52 0.0 0.0 0.0 5.381461976631711 0.0 53 0.0 0.0 0.0 5.599484116626491 0.0 54 0.0 0.0 0.0 5.975649076476639 0.0 55 0.0 0.0 0.0 6.205954153935914 0.0 56 0.0 0.0 0.0 6.4746434109717335 0.0 57 0.0 0.0 0.0 6.651210637023844 0.0 58 0.0 0.0 0.0 6.913758425327417 0.0 59 0.0 0.0 0.0 7.208548924475288 0.0 60 0.0 0.0 0.0 7.388186884893522 0.0 61 0.0 0.0 0.0 7.5785724155931895 0.0 62 0.0 0.0 0.0 7.753604274462238 0.0 63 0.0 0.0 0.0 7.994656922202945 0.0 64 0.0 0.0 0.0 8.21728516374691 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAGA 20 7.872656E-5 70.00001 36 CTATCGG 15 0.0022154627 70.0 42 TTTGTTA 15 0.0022154627 70.0 9 TGGCCAC 15 0.0022154627 70.0 49 GGCTTAG 25 2.8109826E-6 70.0 29 TCGTGTA 15 0.0022154627 70.0 34 GGTGGAT 15 0.0022154627 70.0 47 CTAGGTG 15 0.0022154627 70.0 44 TATCGGT 15 0.0022154627 70.0 43 TGGTCGC 100 0.0 66.5 49 GGTGGTC 110 0.0 63.63636 47 CGGTGGT 105 0.0 63.333332 46 TTACGCT 35 2.9322473E-7 60.0 13 GTGGTCG 105 0.0 59.999996 48 GGTCGCC 135 0.0 59.629627 50 TTAGGTG 30 8.292001E-6 58.333332 32 GCCCACG 30 8.292001E-6 58.333332 20 CCGAATC 30 8.292001E-6 58.333332 55 CCGGTGG 30 8.292001E-6 58.333332 45 CTCGGTG 100 0.0 55.999996 44 >>END_MODULE