##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779786_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18029 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 22.137888956680904 23.0 12.0 32.0 12.0 34.0 2 20.5729657773587 21.0 12.0 32.0 12.0 34.0 3 20.97359809196295 21.0 11.0 32.0 11.0 34.0 4 21.135226579399855 21.0 12.0 32.0 12.0 34.0 5 20.69887403627489 21.0 11.0 32.0 11.0 34.0 6 21.893560374951466 21.0 11.0 34.0 11.0 38.0 7 22.846469576792945 22.0 12.0 34.0 11.0 38.0 8 22.003605302568086 21.0 11.0 34.0 11.0 38.0 9 23.21853680181929 23.0 11.0 34.0 11.0 38.0 10-11 22.524183260302845 22.0 11.5 34.0 11.0 38.0 12-13 22.609129735426258 22.5 11.0 34.0 11.0 38.0 14-15 21.977647124077876 21.5 11.0 32.0 11.0 37.5 16-17 21.868822452715072 21.0 11.0 32.5 11.0 38.0 18-19 21.63026235509457 21.0 11.0 33.0 10.0 38.0 20-21 22.125270397692606 22.5 11.0 32.5 10.5 38.0 22-23 22.001053857673746 21.0 11.0 32.5 10.0 38.0 24-25 22.17141827056409 21.5 11.0 34.0 10.0 38.0 26-27 21.509096455710242 21.0 11.0 31.0 10.0 38.0 28-29 21.367574463364576 21.0 11.0 32.0 10.5 38.0 30-31 21.47448555105663 21.0 11.0 33.5 10.5 38.0 32-33 21.66867269399301 21.0 11.0 34.0 11.0 38.0 34-35 21.905818403682954 21.0 11.0 34.0 11.0 38.0 36-37 21.641993454989183 21.0 11.0 34.0 11.0 38.0 38-39 21.557213378445837 21.0 11.0 34.0 11.0 38.0 40-41 21.50435409617838 21.0 11.0 33.0 11.0 38.0 42-43 21.73240335015808 21.0 11.0 34.0 11.0 38.0 44-45 21.702035609296132 21.0 11.0 34.0 11.0 38.0 46-47 21.655028010427642 21.0 11.0 34.0 11.0 38.0 48-49 21.443646347551166 21.0 11.0 33.5 11.0 38.0 50-51 21.20464252038383 21.0 11.0 32.0 11.0 38.0 52-53 21.560319485273723 21.0 11.0 33.5 11.0 38.0 54-55 21.476953796660936 21.0 11.0 33.0 11.0 38.0 56-57 21.501774918187365 21.0 11.0 33.5 11.0 38.0 58-59 21.303483276942703 21.0 11.0 32.5 10.5 38.0 60-61 21.5912696211659 21.0 11.0 33.5 11.0 38.0 62-63 21.335265405735207 21.0 11.0 33.0 11.0 38.0 64-65 21.29516334793943 21.0 11.0 32.5 10.5 38.0 66-67 21.71293471629042 21.0 11.0 33.0 11.0 38.0 68-69 21.554856065228243 21.0 11.0 32.0 10.0 38.0 70-71 21.565034111708915 21.0 11.0 32.0 10.0 38.0 72-73 21.007293804426205 21.0 11.0 31.0 10.0 38.0 74-75 21.24108380941816 21.0 11.0 31.5 10.0 38.0 76 20.843197071384992 21.0 11.0 31.0 10.0 37.0 >>END_MODULE >>Per sequence quality scores fail #Quality Count 11 2.0 12 19.0 13 289.0 14 969.0 15 1686.0 16 2093.0 17 2180.0 18 2054.0 19 1724.0 20 1157.0 21 854.0 22 529.0 23 375.0 24 252.0 25 195.0 26 163.0 27 108.0 28 87.0 29 97.0 30 106.0 31 111.0 32 136.0 33 169.0 34 210.0 35 344.0 36 659.0 37 1461.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.71984025736314 20.716623218148538 8.774751788784735 51.78878473570359 2 24.97642686782406 21.02723390093738 27.261634034056243 26.73470519718232 3 9.456985967053082 33.88429752066116 32.31460424871041 24.34411226357535 4 21.909146375284262 35.8200676687559 15.79677186754673 26.47401408841311 5 13.761162571412724 30.600698874036276 34.01741638471351 21.620722169837485 6 27.572244716845084 40.21853680181929 11.104331909701038 21.104886571634587 7 15.824504964224307 39.525209384879915 11.154251483720671 33.49603416717511 8 13.306339785900493 43.324643629707694 20.051028897886738 23.317987686505077 9 20.577957734760663 21.23800543568695 13.988573964168838 44.19546286538355 10-11 13.425592101614066 35.05740751012258 20.938487991569136 30.57851239669421 12-13 13.37844583726219 24.585390204670254 25.647567807421378 36.38859615064618 14-15 28.082533695712463 28.570636197237782 17.202839869099783 26.14399023794997 16-17 30.76155083476621 24.174940373842144 15.214376837317655 29.849131954073993 18-19 19.62671251871984 23.825503355704697 20.597370902434967 35.9504132231405 20-21 26.706972100504743 22.85484497198957 17.091907482389484 33.346275445116206 22-23 30.817017028121356 21.967385878307173 15.092351211936325 32.12324588163514 24-25 18.836319263408953 33.73176548893449 14.068999944533806 33.36291530312275 26-27 24.258139663874868 34.03960286205558 16.528925619834713 25.173331854234842 28-29 20.442065561040547 30.104276443507683 21.226912197015917 28.226745798435854 30-31 22.27799656109601 27.67763048421987 22.386155638138554 27.658217316545564 32-33 15.893837705918243 32.45326973209829 21.98125242664596 29.671640135337512 34-35 14.60702202007876 37.836263797215594 19.188529591214156 28.368184591491485 36-37 24.1679609496339 26.356223652096737 19.97448413578877 29.501331262480583 38-39 26.166902404526166 21.87369997503952 24.91333166930138 27.04606595113293 40-41 18.736480115369684 30.44816684230961 20.888568417549504 29.9267846247712 42-43 12.160962893116647 29.399855787897277 24.061234677464086 34.377946641521994 44-45 12.194580802618077 23.792883490029677 30.321435504895028 33.69110020245722 46-47 16.329700196910444 28.884821255234765 24.577751892836343 30.20772665501844 48-49 18.076432414443396 30.55077930001664 20.941261301236896 30.43152698430307 50-51 26.701425481169228 28.936713073381775 15.305896056353651 29.055965389095345 52-53 11.163190592411803 33.89449744841358 20.837031284668296 34.105280674506325 54-55 15.145464126244557 26.19740965693208 21.23304767451535 37.42407854230802 56-57 19.05316582078376 29.752891255512104 18.112987769365173 33.080955154338966 58-59 16.978672657181683 29.888787198047535 18.085253903541616 35.047286241229166 60-61 12.72222992650118 26.800721120510328 21.028983497434474 39.448065455554016 62-63 16.904260039937874 27.75404925671178 19.306079431994675 36.03561127135567 64-65 17.417350787663636 26.54759263368094 18.6543155092079 37.380741069447524 66-67 13.717550477035722 37.67472820057688 13.817395163079654 34.790326159307746 68-69 15.397415275389651 40.77042542570303 12.147096344777857 31.685062954129457 70-71 16.015863331299574 37.98324920960675 12.036163958067558 33.96472350102612 72-73 18.434189361584114 36.71862000110933 13.214820566864496 31.632370070442068 74-75 14.681901381108215 34.938155194409006 15.54162737811304 34.83831604636974 76 12.208109157468524 34.095069055410725 16.467912807144046 37.22890897997671 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 1.5 17 3.0 18 2.5 19 2.0 20 3.0 21 4.0 22 6.5 23 15.5 24 34.5 25 47.0 26 34.5 27 32.0 28 52.5 29 63.0 30 71.5 31 88.0 32 114.5 33 133.0 34 142.0 35 186.0 36 246.0 37 271.0 38 322.0 39 413.0 40 493.5 41 584.0 42 634.0 43 689.5 44 812.5 45 930.5 46 981.0 47 1042.5 48 1093.0 49 1169.5 50 1257.0 51 1197.0 52 1096.5 53 1006.5 54 957.0 55 952.5 56 882.0 57 745.0 58 674.0 59 644.0 60 590.0 61 483.5 62 401.0 63 378.0 64 333.5 65 269.0 66 208.5 67 191.0 68 164.0 69 119.5 70 87.0 71 72.0 72 63.0 73 47.0 74 38.5 75 37.0 76 30.5 77 22.0 78 19.0 79 18.0 80 17.5 81 12.5 82 7.0 83 6.0 84 6.0 85 5.0 86 3.5 87 3.0 88 2.5 89 2.0 90 1.5 91 1.5 92 2.0 93 3.0 94 2.5 95 1.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.005546619335515004 38-39 0.002773309667757502 40-41 0.0 42-43 0.0 44-45 0.002773309667757502 46-47 0.002773309667757502 48-49 0.0 50-51 0.0 52-53 0.005546619335515004 54-55 0.002773309667757502 56-57 0.002773309667757502 58-59 0.002773309667757502 60-61 0.008319929003272506 62-63 0.005546619335515004 64-65 0.005546619335515004 66-67 0.005546619335515004 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 18029.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 95.51278495756836 #Duplication Level Percentage of deduplicated Percentage of total 1 97.04994192799072 92.69510233512675 2 1.8292682926829267 3.4943701813744523 3 0.7317073170731708 2.096622108824671 4 0.2380952380952381 0.9096455710244606 5 0.10452961672473868 0.4991957401963503 6 0.029036004645760744 0.1663985800654501 7 0.005807200929152149 0.03882633534860502 8 0.0 0.0 9 0.011614401858304297 0.09983914803927006 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.005546619335515004 0.0 2 0.0 0.0 0.0 0.005546619335515004 0.0 3 0.0 0.0 0.0 0.005546619335515004 0.0 4 0.0 0.0 0.0 0.005546619335515004 0.0 5 0.0 0.0 0.0 0.011093238671030008 0.0 6 0.0 0.0 0.0 0.011093238671030008 0.0 7 0.0 0.0 0.0 0.011093238671030008 0.0 8 0.0 0.0 0.0 0.011093238671030008 0.0 9 0.0 0.0 0.0 0.011093238671030008 0.0 10 0.0 0.0 0.0 0.011093238671030008 0.0 11 0.0 0.0 0.0 0.011093238671030008 0.0 12 0.0 0.0 0.0 0.011093238671030008 0.0 13 0.0 0.0 0.0 0.011093238671030008 0.0 14 0.0 0.0 0.0 0.011093238671030008 0.0 15 0.0 0.0 0.0 0.011093238671030008 0.0 16 0.0 0.0 0.0 0.011093238671030008 0.0 17 0.0 0.0 0.0 0.011093238671030008 0.0 18 0.0 0.0 0.0 0.011093238671030008 0.0 19 0.0 0.0 0.0 0.022186477342060015 0.0 20 0.0 0.0 0.0 0.02773309667757502 0.0 21 0.0 0.0 0.0 0.02773309667757502 0.0 22 0.0 0.0 0.0 0.09429252870375505 0.0 23 0.0 0.0 0.0 0.09429252870375505 0.0 24 0.0 0.0 0.0 0.1331188640523601 0.0 25 0.0 0.0 0.0 0.1331188640523601 0.0 26 0.0 0.0 0.0 0.1386654833878751 0.0 27 0.0 0.0 0.0 0.1386654833878751 0.0 28 0.0 0.0 0.0 0.17194519940096512 0.0 29 0.0 0.0 0.0 0.17749181873648012 0.005546619335515004 30 0.0 0.0 0.0 0.19967829607854012 0.005546619335515004 31 0.0 0.0 0.0 0.20522491541405513 0.005546619335515004 32 0.0 0.0 0.0 0.21077153474957014 0.005546619335515004 33 0.0 0.0 0.0 0.22741139275611516 0.005546619335515004 34 0.0 0.0 0.0 0.24405125076266015 0.005546619335515004 35 0.0 0.0 0.0 0.24959787009817516 0.005546619335515004 36 0.0 0.0 0.0 0.3050640634533252 0.005546619335515004 37 0.0 0.0 0.0 0.4770092628542903 0.005546619335515004 38 0.0 0.0 0.0 0.6378612235842254 0.005546619335515004 39 0.0 0.0 0.0 0.8153530423207055 0.005546619335515004 40 0.0 0.0 0.0 0.9484719063730657 0.005546619335515004 41 0.0 0.0 0.0 1.1204171057740306 0.005546619335515004 42 0.0 0.0 0.0 1.3034555438460258 0.005546619335515004 43 0.0 0.0 0.0 1.442121027233901 0.005546619335515004 44 0.0 0.0 0.0 1.6029729879638361 0.005546619335515004 45 0.0 0.0 0.0 1.7804648067003161 0.005546619335515004 46 0.0 0.0 0.0 1.9856897221143712 0.005546619335515004 47 0.0 0.0 0.0 2.1853680181929116 0.005546619335515004 48 0.0 0.0 0.0 2.3406733595873317 0.005546619335515004 49 0.0 0.0 0.0 2.5680847523434465 0.005546619335515004 50 0.0 0.0 0.0 2.806589383770592 0.005546619335515004 51 0.0 0.0 0.0 3.006267679849132 0.005546619335515004 52 0.0 0.0 0.0 3.133839924565977 0.005546619335515004 53 0.0 0.0 0.0 3.3057851239669422 0.005546619335515004 54 0.0 0.0 0.0 3.4444506073548173 0.005546619335515004 55 0.0 0.0 0.0 3.5110100393809973 0.005546619335515004 56 0.0 0.0 0.0 3.6718620001109326 0.005546619335515004 57 0.0 0.0 0.0 3.7495146708081424 0.005546619335515004 58 0.0 0.0 0.0 3.9214598702091075 0.005546619335515004 59 0.0 0.0 0.0 4.137778024294192 0.005546619335515004 60 0.0 0.0 0.0 4.259803649675523 0.005546619335515004 61 0.0 0.0 0.0 4.459481945754063 0.005546619335515004 62 0.0 0.0 0.0 4.575960951799878 0.005546619335515004 63 0.0 0.0 0.0 4.747906151200843 0.005546619335515004 64 0.0 0.0 0.0 4.892118253924234 0.005546619335515004 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCT 20 7.718856E-5 70.00001 13 ACTAACG 15 0.0021893983 70.0 11 GAGTGTA 15 0.0021893983 70.0 34 GGGTAGA 15 0.0021893983 70.0 36 GGATACC 15 0.0021893983 70.0 38 GTCCATA 15 0.0021893983 70.0 22 GACGATC 15 0.0021893983 70.0 23 GTGGTAG 15 0.0021893983 70.0 48 GCTTCCG 15 0.0021893983 70.0 17 ATTTATC 15 0.0021893983 70.0 45 CGACGAT 30 8.0512455E-6 58.333332 22 CTAACGC 25 2.328154E-4 55.999996 12 GATCTCT 25 2.328154E-4 55.999996 41 GTGGTCG 25 2.328154E-4 55.999996 48 GAGATGA 25 2.328154E-4 55.999996 4 GGTCGCC 25 2.328154E-4 55.999996 50 TGGTCGC 20 0.006841936 52.500004 49 ATCTCTG 20 0.006841936 52.500004 42 ATCTCGG 20 0.006841936 52.500004 42 TGACTCT 20 0.006841936 52.500004 13 >>END_MODULE