##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779785_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 164885 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.18500166782909 34.0 31.0 34.0 12.0 34.0 2 30.9511902234891 34.0 32.0 34.0 21.0 34.0 3 30.452933862995422 34.0 32.0 34.0 12.0 34.0 4 30.542735846195832 34.0 32.0 34.0 21.0 34.0 5 31.181884343633442 34.0 34.0 34.0 21.0 34.0 6 33.84618370379355 38.0 34.0 38.0 21.0 38.0 7 34.169627316008125 38.0 35.0 38.0 21.0 38.0 8 33.41711495891076 38.0 34.0 38.0 11.0 38.0 9 34.308536252539646 38.0 36.0 38.0 22.0 38.0 10-11 32.904487976468445 37.5 31.0 38.0 16.5 38.0 12-13 33.828277284167754 38.0 34.0 38.0 21.0 38.0 14-15 32.528792794978315 37.0 31.0 38.0 11.5 38.0 16-17 33.204936774115296 37.5 32.5 38.0 16.0 38.0 18-19 34.08085332201232 38.0 35.0 38.0 21.0 38.0 20-21 32.75122661248749 37.5 30.5 38.0 16.0 38.0 22-23 33.67528277284168 38.0 35.0 38.0 16.0 38.0 24-25 34.01898292749492 38.0 35.0 38.0 21.0 38.0 26-27 32.8736270734148 38.0 33.0 38.0 11.0 38.0 28-29 34.16405676683749 38.0 35.0 38.0 22.0 38.0 30-31 34.517824544379415 38.0 37.0 38.0 23.0 38.0 32-33 34.619798647542225 38.0 37.0 38.0 23.0 38.0 34-35 34.617127088576886 38.0 36.5 38.0 23.5 38.0 36-37 34.142893531855535 38.0 35.5 38.0 22.0 38.0 38-39 34.090396336840826 38.0 35.5 38.0 21.5 38.0 40-41 34.10411498923492 38.0 35.5 38.0 21.5 38.0 42-43 34.42870182248234 38.0 36.5 38.0 22.5 38.0 44-45 34.51258756102738 38.0 36.0 38.0 23.0 38.0 46-47 34.438071989568485 38.0 36.0 38.0 22.5 38.0 48-49 34.19783485459563 38.0 35.5 38.0 22.0 38.0 50-51 33.59386845377081 38.0 35.0 38.0 16.0 38.0 52-53 34.15069290717773 38.0 35.5 38.0 22.0 38.0 54-55 34.29203384176851 38.0 36.0 38.0 22.5 38.0 56-57 34.30345695484732 38.0 36.0 38.0 22.5 38.0 58-59 34.50023652848955 38.0 37.0 38.0 23.0 38.0 60-61 34.420335385268515 38.0 36.0 38.0 23.0 38.0 62-63 34.402898990205294 38.0 36.0 38.0 22.5 38.0 64-65 34.44526488158414 38.0 36.5 38.0 23.0 38.0 66-67 34.23350820268672 38.0 36.0 38.0 22.0 38.0 68-69 33.62608484701458 38.0 34.0 38.0 21.0 38.0 70-71 33.6411953785972 38.0 34.0 38.0 21.0 38.0 72-73 33.950386633107925 38.0 35.0 38.0 21.5 38.0 74-75 34.07738726991539 38.0 35.5 38.0 22.0 38.0 76 33.17794220214088 37.0 33.0 38.0 21.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 26.0 13 298.0 14 1155.0 15 2122.0 16 2554.0 17 2848.0 18 2759.0 19 2255.0 20 1797.0 21 1344.0 22 1154.0 23 971.0 24 926.0 25 1033.0 26 1134.0 27 1346.0 28 1711.0 29 1920.0 30 2575.0 31 3396.0 32 4457.0 33 6149.0 34 9081.0 35 14721.0 36 29293.0 37 67860.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 37.71840980077024 21.057706886617947 12.566940594960124 28.656942717651695 2 18.26485125996907 23.554598659671893 33.80174060708979 24.378809473269246 3 17.410316281044363 25.1939230372684 30.786912090244716 26.60884859144252 4 13.124298753676806 20.314764836097886 33.87209267064924 32.688843739576065 5 13.11156260423932 35.18209661279073 35.59935712769506 16.106983655274888 6 27.288606397302313 38.296478693853786 18.519911209228418 15.895003699615481 7 25.633047665835747 31.33790643934569 21.29223603049546 21.7368098643231 8 22.518998320020863 37.47566456214407 20.349581218197148 19.655755899637924 9 23.535833858993644 17.061720607501577 21.235867824736765 38.16657770876801 10-11 24.049393048947273 25.991697067287717 25.419771168991062 24.539138714773944 12-13 23.610395123874213 23.473936379901144 26.066652515389517 26.849015980835127 14-15 23.845552024453557 25.218032071031754 23.357936488682952 27.578479415831737 16-17 24.323390009370197 26.817863413480346 24.049865208676376 24.80888136847308 18-19 22.135122103584113 26.55680932554183 26.122555426505862 25.185513144368194 20-21 23.300785395881977 26.073627073414805 26.139430512175153 24.486157018528065 22-23 24.634587159301805 25.993437731225967 24.666731359396415 24.705243750075812 24-25 22.57149875212654 27.789823538866028 24.813728730808073 24.824948978199362 26-27 22.893904521043517 27.76792239416076 25.448419954574263 23.889753130221457 28-29 22.214034225824943 27.352760112933698 26.543361506106123 23.88984415513524 30-31 22.89262213057586 27.120417260514905 26.002971768202084 23.98398884070716 32-33 21.493465142371956 27.80210449707372 26.116384146526368 24.58804621402796 34-35 22.017291415852185 27.66201983873071 26.13029515494649 24.190393590470617 36-37 23.50935830904409 25.967298237526048 26.08376528250841 24.439578170921454 38-39 23.28025158987454 26.28713877171009 26.77994680705883 23.65266283135654 40-41 22.254265145588086 26.532753528259434 26.959722955065107 24.253258371087377 42-43 21.219592074380014 26.822352819878336 26.806887307969895 25.151167797771752 44-45 20.876901428952667 25.935248307819208 27.542516800504625 25.645333462723503 46-47 21.469553614750122 25.86335516739447 27.706210577389616 24.960880640465792 48-49 21.464050702004428 26.610364799708886 27.35209388361585 24.57349061467083 50-51 22.74502668607472 26.24393498301795 26.24423823386706 24.766800097040274 52-53 19.7991696261498 26.866445678446976 27.525467729755466 25.808916965647754 54-55 20.31187452236253 26.43594502468552 27.10615379016704 26.146026662784916 56-57 20.42993794772566 26.573901650481314 27.08554479227956 25.91061560951347 58-59 20.21253688612839 26.61260239407274 26.94317489104755 26.231685828751317 60-61 19.76590414141598 25.904020091357438 27.054177510054778 27.275898257171804 62-63 20.148237556142547 26.142942491227966 27.071246827055173 26.637573125574317 64-65 20.977809861205472 25.992126079782587 26.09464476366107 26.935419295350872 66-67 20.443661266988364 27.005468425378588 25.404065985059642 27.146804322573402 68-69 20.65233542267466 27.731836527993835 24.981123149841252 26.634704899490245 70-71 21.310913667101314 26.990326591260576 24.803954271158688 26.894805470479426 72-73 21.938342289450382 26.91050352381761 24.09266245345043 27.058491733281574 74-75 21.349939954146805 26.66672731904363 24.60363671652292 27.37969601028664 76 21.26927905580388 26.64224501307003 24.298130166605006 27.790345764521078 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 0.5 7 0.5 8 1.0 9 0.5 10 0.0 11 0.5 12 1.0 13 1.5 14 3.5 15 8.0 16 16.5 17 22.0 18 43.5 19 64.0 20 70.0 21 77.0 22 120.0 23 192.5 24 306.0 25 390.0 26 495.0 27 666.5 28 879.0 29 1025.0 30 1190.5 31 1570.5 32 2153.0 33 2521.0 34 2908.0 35 3735.5 36 4630.5 37 5085.0 38 5569.0 39 6817.5 40 7950.5 41 8720.5 42 9122.0 43 9416.0 44 10068.0 45 10338.0 46 10250.0 47 10398.5 48 10122.0 49 9453.5 50 9210.0 51 8711.5 52 7491.5 53 6471.5 54 6173.0 55 5708.0 56 4827.5 57 3934.5 58 3457.0 59 3051.0 60 2481.0 61 2175.5 62 2034.0 63 1788.0 64 1438.0 65 1286.0 66 1141.0 67 1044.0 68 962.5 69 843.5 70 749.0 71 692.0 72 673.5 73 574.5 74 465.0 75 436.0 76 421.0 77 381.0 78 322.0 79 288.0 80 242.0 81 187.5 82 148.5 83 118.0 84 110.0 85 95.5 86 73.0 87 57.0 88 58.5 89 47.5 90 32.0 91 25.0 92 21.0 93 18.0 94 12.0 95 6.0 96 3.0 97 4.0 98 6.0 99 8.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0018194499196409618 7 0.004851866452375898 8 0.0012129666130939745 9 0.007884282985110834 10-11 0.0021226915729144554 12-13 0.0 14-15 6.064833065469872E-4 16-17 3.032416532734936E-4 18-19 0.002729174879461443 20-21 0.0 22-23 0.0018194499196409618 24-25 0.002729174879461443 26-27 3.032416532734936E-4 28-29 0.005761591412196379 30-31 0.0 32-33 0.0 34-35 0.00333565818600843 36-37 0.0191042241562301 38-39 0.008187524638384328 40-41 0.0012129666130939745 42-43 0.0012129666130939745 44-45 0.005458349758922886 46-47 0.0030324165327349365 48-49 0.0 50-51 0.0030324165327349365 52-53 0.011826424477666252 54-55 0.00667131637201686 56-57 0.014555599357127694 58-59 0.011826424477666252 60-61 0.023046365648785518 62-63 0.008794007944931315 64-65 0.02243988234223853 66-67 0.017891257543136127 68-69 3.032416532734936E-4 70-71 0.0 72-73 0.004245383145828911 74-75 0.00667131637201686 76 0.002425933226187949 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 164885.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.700397246565785 #Duplication Level Percentage of deduplicated Percentage of total 1 76.03137031807145 45.39103011189617 2 10.5214502676839 12.562695211814296 3 5.556853622113636 9.95239106043606 4 2.909475095746518 6.947872759802287 5 1.5746111726281784 4.700245625739152 6 0.9549254853357985 3.4205658489250084 7 0.5404471895730264 2.2585438335809807 8 0.4022877576521024 1.9213391151408559 9 0.27123947296240236 1.4573793856324104 >10 1.2302284710017575 11.150802074172908 >50 0.007111147231224032 0.23713497285987203 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0012129666130939747 0.0 2 0.0 0.0 0.0 0.0012129666130939747 0.0 3 0.0 0.0 0.0 0.0012129666130939747 0.0 4 0.0 0.0 0.0 0.0036388998392819236 0.0 5 0.0 0.0 0.0 0.004851866452375899 0.0 6 0.0 0.0 0.0 0.004851866452375899 0.0 7 0.0 0.0 0.0 0.004851866452375899 0.0 8 0.0 0.0 0.0 0.004851866452375899 0.0 9 0.0 0.0 0.0 0.00667131637201686 0.0 10 0.0 0.0 0.0 0.007277799678563847 0.0 11 0.0 0.0 0.0 0.007277799678563847 0.0 12 0.0 0.0 0.0 0.007277799678563847 0.0 13 0.0 0.0 0.0 0.007277799678563847 0.0 14 0.0 0.0 0.0 0.007277799678563847 0.0 15 0.0 0.0 0.0 0.010310216211298785 0.0 16 0.0 0.0 0.0 0.010916699517845772 0.0 17 0.0 0.0 0.0 0.013949116050580707 0.0 18 0.0 0.0 0.0 0.013949116050580707 0.0 19 0.0 0.0 0.0 0.015162082663674682 0.0 20 0.0 0.0 0.0 0.016981532583315643 0.0 21 0.0 0.0 0.0 0.019407465809503595 0.0 22 0.0 0.0 0.0 0.02486581556842648 0.0 23 0.0 0.0 0.0 0.025472298874973466 0.0 24 0.0 0.0 0.0 0.030930648633896354 0.0 25 0.0 0.0 0.0 0.032143615246990324 0.0 26 0.0 0.0 0.0 0.03275009855353731 0.0 27 0.0 0.0 0.0 0.0430603147648361 0.0 28 0.0 0.0 0.0 0.06004184734815174 0.0 29 0.0 0.0 0.0 0.08066227977074931 0.0 30 0.0 0.0 0.0 0.10613457864572277 0.0 31 0.0 0.0 0.0 0.13281984413379022 0.0 32 0.0 0.0 0.0 0.16617642599387453 0.0 33 0.0 0.0 0.0 0.19953300785395883 0.0 34 0.0 0.0 0.0 0.25593595536282865 0.0 35 0.0 0.0 0.0 0.35236680110379964 0.0 36 0.0 0.0 0.0 0.4815477453983079 0.0 37 0.0 0.0 0.0 0.7405161172938715 0.0 38 0.0 0.0 0.0 1.0807532522667314 0.0 39 0.0 0.0 0.0 1.4367589532098128 0.0 40 0.0 0.0 0.0 1.9625799799860508 0.0 41 0.0 0.0 0.0 2.496891773053947 0.0 42 0.0 0.0 0.0 3.0857870637110714 0.0 43 0.0 0.0 0.0 3.7535251842193045 0.0 44 0.0 0.0 0.0 4.423689237953726 0.0 45 0.0 0.0 0.0 5.1975619371076816 0.0 46 0.0 0.0 0.0 5.907753889074203 0.0 47 0.0 0.0 0.0 6.673135821936501 0.0 48 0.0 0.0 0.0 7.326924826394153 0.0 49 0.0 0.0 0.0 7.978894380932164 0.0 50 0.0 0.0 0.0 8.656336234345149 0.0 51 0.0 0.0 0.0 9.308912272189708 0.0 52 0.0 0.0 0.0 10.062771022227613 0.0 53 0.0 0.0 0.0 10.780847257179246 0.0 54 0.0 0.0 0.0 11.484974376080299 0.0 55 0.0 0.0 0.0 12.122388331261183 0.0 56 0.0 0.0 0.0 12.784668102010492 0.0 57 0.0 0.0 0.0 13.357188343390849 0.0 58 0.0 0.0 0.0 13.965491099857477 0.0 59 0.0 0.0 0.0 14.5646966067259 0.0 60 0.0 0.0 0.0 15.181490129484185 0.0 61 0.0 0.0 0.0 15.75643630409073 0.0 62 0.0 0.0 0.0 16.306516663128846 0.0 63 0.0 0.0 0.0 16.900870303544895 0.0 64 0.0 0.0 0.0 17.558904691148378 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGGTA 15 0.0022225087 69.99211 40 CGCTTAT 30 8.354E-6 58.32676 50 GCACCGT 20 0.006944625 52.494083 6 ATCGTGA 20 0.006944625 52.494083 29 TGCATCA 20 0.006944625 52.494083 10 CTTGAAT 20 0.006944625 52.494083 12 GTCGCTT 35 2.0810146E-5 49.994366 48 CTTCCGA 35 2.0810146E-5 49.994366 18 TAGATCT 115 0.0 48.690166 39 TCGCCGT 30 5.8591645E-4 46.675568 52 GCCGAGT 30 5.8591645E-4 46.675568 58 CCGAGTT 30 5.8591645E-4 46.675568 59 GCATCGG 30 5.8679364E-4 46.661407 8 ATCTCGG 85 1.8189894E-12 45.289017 42 GATCTCG 85 1.8189894E-12 45.289017 41 GTCGCCG 70 3.8016879E-10 44.99493 51 CGACGAA 110 0.0 44.540436 22 GTAGATC 135 0.0 44.069107 38 CGACGAC 40 4.5806613E-5 43.745068 22 GACGAAT 40 4.5806613E-5 43.745068 23 >>END_MODULE