##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779782_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 133005 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.506326829818427 34.0 27.0 34.0 12.0 34.0 2 30.072079996992596 34.0 31.0 34.0 12.0 34.0 3 29.702101424758467 34.0 31.0 34.0 11.0 34.0 4 29.93600240592459 34.0 31.0 34.0 12.0 34.0 5 30.42150295101688 34.0 32.0 34.0 11.0 34.0 6 33.19354911469494 38.0 34.0 38.0 12.0 38.0 7 33.071816848990636 38.0 34.0 38.0 12.0 38.0 8 32.50654486673433 37.0 32.0 38.0 11.0 38.0 9 33.403721664599075 38.0 34.0 38.0 12.0 38.0 10-11 32.108574865606556 37.0 30.0 38.0 11.5 38.0 12-13 32.9536671553701 38.0 34.0 38.0 11.0 38.0 14-15 31.697278297808353 37.0 28.5 38.0 11.0 38.0 16-17 32.34606969662795 37.5 30.5 38.0 11.0 38.0 18-19 33.140246607270406 38.0 34.0 38.0 11.0 38.0 20-21 31.932517574527274 37.0 29.5 38.0 11.0 38.0 22-23 32.80435321980377 38.0 32.5 38.0 11.0 38.0 24-25 33.12566444870494 38.0 34.0 38.0 11.0 38.0 26-27 32.03255140784181 37.5 29.0 38.0 11.0 38.0 28-29 33.19086124581783 38.0 34.0 38.0 11.0 38.0 30-31 33.522499154167136 38.0 35.0 38.0 11.0 38.0 32-33 33.60582308935754 38.0 35.0 38.0 11.0 38.0 34-35 33.604105108830495 38.0 34.5 38.0 11.0 38.0 36-37 33.118082026991466 38.0 34.0 38.0 11.0 38.0 38-39 33.09443629938724 38.0 34.0 38.0 11.0 38.0 40-41 33.13746851622119 38.0 34.0 38.0 11.0 38.0 42-43 33.44759971429646 38.0 35.0 38.0 11.0 38.0 44-45 33.52465320852599 38.0 34.5 38.0 11.0 38.0 46-47 33.446731325890006 38.0 34.0 38.0 11.0 38.0 48-49 33.20710499605278 38.0 34.0 38.0 11.0 38.0 50-51 32.59772940866885 38.0 32.5 38.0 11.0 38.0 52-53 33.19471448441788 38.0 34.0 38.0 11.0 38.0 54-55 33.29949250028194 38.0 34.0 38.0 11.0 38.0 56-57 33.311375512198794 38.0 34.0 38.0 11.0 38.0 58-59 33.49492876207661 38.0 35.0 38.0 11.0 38.0 60-61 33.42738242923198 38.0 34.0 38.0 11.0 38.0 62-63 33.418965452426605 38.0 34.0 38.0 11.0 38.0 64-65 33.4373895718206 38.0 34.5 38.0 11.0 38.0 66-67 33.28239915792639 38.0 34.0 38.0 11.0 38.0 68-69 32.70793955114469 38.0 32.5 38.0 11.0 38.0 70-71 32.72031878500808 37.5 32.0 38.0 11.0 38.0 72-73 32.935942257809856 38.0 33.5 38.0 11.0 38.0 74-75 33.05356189616931 38.0 33.5 38.0 11.0 38.0 76 32.153610766512536 37.0 31.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 22.0 13 342.0 14 1324.0 15 2384.0 16 3298.0 17 3574.0 18 3400.0 19 2864.0 20 2087.0 21 1429.0 22 1013.0 23 811.0 24 692.0 25 734.0 26 776.0 27 951.0 28 1126.0 29 1480.0 30 1967.0 31 2540.0 32 3464.0 33 4928.0 34 7108.0 35 11514.0 36 22372.0 37 50802.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.23193287419927 23.738383808005775 9.583170430964483 28.446512886830472 2 19.71354460358633 27.25987744821623 29.54550580805233 23.481072140145105 3 18.888763580316528 23.43370549979324 31.977745197548963 25.699785722341268 4 13.228825983985566 22.32472463441224 31.917597082816435 32.52885229878576 5 13.186722303672793 34.102477350475546 35.17311379271456 17.5376865531371 6 24.79323930107365 41.16868665604042 17.478421701602958 16.55965234128297 7 25.029698801521782 29.04993909866017 20.770364355423226 25.14999774439482 8 22.694566206269126 35.79973082909151 20.213381854271773 21.292321110367592 9 23.266690226095328 19.455326059986316 19.999699241336273 37.278284472582094 10-11 22.841557582273815 26.819347222953212 24.7385358004827 25.60055939429027 12-13 22.467952332619074 23.79985714822751 26.36367053870155 27.36851998045186 14-15 24.027472857959157 25.376680400589457 22.89254458512526 27.703302156326124 16-17 25.14238240059547 26.369032626715637 23.169516820859446 25.31906815182945 18-19 22.209064525345486 26.17366656140509 25.39247530112329 26.224793612126135 20-21 23.554001729258296 25.856922672079996 25.18815082139769 25.40092477726401 22-23 24.94502065719581 25.638982139702037 24.426617144532702 24.989380058569445 24-25 21.685388189651285 28.211981774710154 24.17332070194433 25.929309333694228 26-27 23.02007090038984 28.60300668779393 24.499355280124206 23.877567131692025 28-29 22.20158722401212 27.51250944552423 26.236564799115786 24.049338531347864 30-31 22.686450458443137 27.18178708239195 25.820930870760012 24.310831588404906 32-33 21.021093271280293 28.449037438582902 25.900627422380445 24.629241867756356 34-35 21.44951617632685 28.95047480132027 25.527619677751627 24.07238934460125 36-37 23.536622048428335 26.6449842081516 25.093623101218228 24.724770642201836 38-39 22.986751282012722 25.95681008165782 26.650450396258478 24.40598824007098 40-41 21.82069027739663 26.83518226826912 26.39234010879331 24.95178734554094 42-43 20.404196850482503 26.687442906067087 27.04006255427448 25.86829768917593 44-45 19.870151352245472 25.615220938188433 28.31256907842798 26.202058631138115 46-47 20.709087081397275 26.40787356581104 27.72740259544969 25.15563675734199 48-49 20.750801664605333 26.787439522722917 27.3114819423403 25.150276870331457 50-51 22.748649471630447 26.39141075234862 25.725638798978974 25.134300977041956 52-53 18.840912081508357 27.393274056807716 27.403049044119026 26.362764817564898 54-55 19.12359584354652 26.41092347253342 27.25943247266876 27.2060482112513 56-57 19.794498144618263 26.912998199133025 26.81299180774711 26.4795118485016 58-59 19.626656640661714 26.99050662656265 26.612275589811073 26.770561142964567 60-61 19.164015912047585 26.36842857250284 26.61583233695039 27.85172317849918 62-63 19.34650695901288 26.430714398502175 26.644259472303055 27.578519170181888 64-65 20.26515863645593 25.956744399407416 25.786414191927925 27.991682772208726 66-67 19.546098864119173 27.969890322265297 24.745733397001814 27.738277416613716 68-69 19.69805192364082 28.688450636451808 24.302835274392308 27.310662165515065 70-71 20.656599262425424 27.960542391741573 23.910648967884303 27.472209377948705 72-73 21.245112781954887 27.314661654135335 23.70827067669173 27.731954887218045 74-75 20.60117302052786 26.92796450860967 24.270621851267013 28.20024061959546 76 20.58224250580814 26.97457952076269 24.227273069028517 28.215904904400652 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 0.5 11 0.5 12 0.0 13 0.0 14 0.5 15 5.0 16 9.0 17 9.0 18 18.5 19 21.0 20 29.5 21 45.0 22 41.0 23 58.0 24 118.0 25 157.0 26 214.0 27 336.0 28 481.5 29 562.0 30 650.5 31 916.5 32 1368.0 33 1642.0 34 1918.0 35 2591.0 36 3398.5 37 3809.0 38 4294.5 39 5375.5 40 6448.0 41 7233.0 42 7541.0 43 7915.0 44 8656.5 45 9087.0 46 9150.0 47 9148.0 48 8862.0 49 8349.5 50 8121.0 51 7590.0 52 6465.5 53 5547.5 54 5223.0 55 4801.0 56 3880.0 57 3127.5 58 2874.0 59 2516.0 60 1950.5 61 1554.5 62 1366.0 63 1247.5 64 1040.0 65 862.5 66 715.0 67 656.0 68 613.0 69 525.5 70 461.5 71 442.0 72 425.5 73 371.0 74 303.5 75 274.0 76 259.5 77 234.0 78 189.0 79 155.0 80 149.5 81 138.0 82 116.0 83 100.0 84 95.5 85 81.0 86 53.0 87 35.0 88 35.0 89 33.0 90 22.0 91 13.0 92 13.0 93 11.5 94 10.0 95 7.5 96 5.0 97 4.0 98 3.0 99 4.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 7.518514341566106E-4 2 0.0 3 0.0 4 0.0 5 0.0 6 7.518514341566106E-4 7 0.002255554302469832 8 0.0030074057366264425 9 0.006014811473252885 10-11 0.0030074057366264425 12-13 0.0 14-15 7.518514341566106E-4 16-17 3.759257170783053E-4 18-19 0.002255554302469832 20-21 0.0 22-23 3.759257170783053E-4 24-25 0.002255554302469832 26-27 0.001127777151234916 28-29 0.0041351828878613585 30-31 3.759257170783053E-4 32-33 3.759257170783053E-4 34-35 0.0015037028683132212 36-37 0.018796285853915264 38-39 0.008270365775722717 40-41 3.759257170783053E-4 42-43 3.759257170783053E-4 44-45 0.0030074057366264425 46-47 0.002255554302469832 48-49 3.759257170783053E-4 50-51 0.001127777151234916 52-53 0.009398142926957632 54-55 0.0052629600390962745 56-57 0.010149994361114243 58-59 0.013157400097740687 60-61 0.018044434419758656 62-63 0.009022217209879328 64-65 0.021051840156385098 66-67 0.018420360136836962 68-69 0.0015037028683132212 70-71 0.001127777151234916 72-73 0.0037592571707830533 74-75 0.01127777151234916 76 0.0015037028683132212 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 133005.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.49994361114244 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7941025452945 48.458328634261875 2 8.723929680432283 10.730423668283146 3 4.597911929387027 8.483139731589038 4 2.7201154062446515 6.691477763993834 5 1.6699674808675027 5.135145295289651 6 0.982909117582337 3.6269313183714895 7 0.6173745079341794 2.6577948197436188 8 0.4058778943250446 1.9969174091199577 9 0.3251913249712707 1.7999323333709258 >10 1.1613975891831096 10.3725423856246 >50 0.0012225237780874839 0.04736664035186647 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0037592571707830533 0.0 5 0.0 0.0 0.0 0.0037592571707830533 0.0 6 0.0 0.0 0.0 0.0037592571707830533 0.0 7 0.0 0.0 0.0 0.006014811473252885 0.0 8 0.0 0.0 0.0 0.009022217209879328 0.0 9 0.0 0.0 0.0 0.01127777151234916 0.0 10 0.0 0.0 0.0 0.01127777151234916 0.0 11 0.0 0.0 0.0 0.01127777151234916 0.0 12 0.0 0.002255554302469832 0.0 0.01127777151234916 0.0 13 0.0 0.002255554302469832 0.0 0.01127777151234916 0.0 14 0.0 0.002255554302469832 0.0 0.01202962294650577 0.0 15 0.0 0.002255554302469832 0.0 0.015037028683132213 0.0 16 0.0 0.002255554302469832 0.0 0.015037028683132213 0.0 17 0.0 0.002255554302469832 0.0 0.015037028683132213 0.0 18 0.0 0.002255554302469832 0.0 0.015037028683132213 0.0 19 0.0 0.002255554302469832 0.0 0.021051840156385098 0.0 20 0.0 0.002255554302469832 0.0 0.025562948761324762 0.0 21 0.0 0.002255554302469832 0.0 0.026314800195481373 0.0 22 0.0 0.002255554302469832 0.0 0.03608886883951731 0.0 23 0.0 0.002255554302469832 0.0 0.041351828878613585 0.0 24 0.0 0.002255554302469832 0.0 0.05262960039096275 0.0 25 0.0 0.002255554302469832 0.0 0.05789256043005902 0.0 26 0.0 0.002255554302469832 0.0 0.062403669034998686 0.0 27 0.0 0.002255554302469832 0.0 0.07443329198150446 0.0 28 0.0 0.002255554302469832 0.0 0.08270365775722717 0.0 29 0.0 0.002255554302469832 0.0 0.10450734934776888 0.0 30 0.0 0.002255554302469832 0.0 0.15037028683132214 0.0 31 0.0 0.002255554302469832 0.0 0.19698507574903198 0.0 32 0.0 0.002255554302469832 0.0 0.23532949889101915 0.0 33 0.0 0.002255554302469832 0.0 0.29773316792601784 0.0 34 0.0 0.002255554302469832 0.0 0.3601368369610165 0.0 35 0.0 0.002255554302469832 0.0 0.4646441863087854 0.0 36 0.0 0.002255554302469832 0.0 0.6315552046915529 0.0 37 0.0 0.002255554302469832 0.0 0.8541032292019097 0.0 38 0.0 0.002255554302469832 0.0 1.220254877636179 0.0 39 0.0 0.002255554302469832 0.0 1.7412879215067103 0.0 40 0.0 0.002255554302469832 0.0 2.293898725611819 0.0 41 0.0 0.002255554302469832 0.0 2.946505770459757 0.0 42 0.0 0.002255554302469832 0.0 3.5577609864290816 0.0 43 0.0 0.002255554302469832 0.0 4.193827299725574 0.0 44 0.0 0.002255554302469832 0.0 4.814104732904778 0.0 45 0.0 0.002255554302469832 0.0 5.556182098417353 0.0 46 0.0 0.002255554302469832 0.0 6.259163189353783 0.0 47 0.0 0.002255554302469832 0.0 7.03432201796925 0.0 48 0.0 0.002255554302469832 0.0 7.734295703169054 0.0 49 0.0 0.002255554302469832 0.0 8.480884177286567 0.0 50 0.0 0.002255554302469832 0.0 9.219954137062517 0.0 51 0.0 0.002255554302469832 0.0 10.067290703357017 0.0 52 0.0 0.002255554302469832 0.0 10.871019886470433 0.0 53 0.0 0.002255554302469832 0.0 11.525130634186684 0.0 54 0.0 0.002255554302469832 0.0 12.217585805044923 0.0 55 0.0 0.002255554302469832 0.0 12.878463215668583 0.0 56 0.0 0.002255554302469832 0.0 13.55588135784369 0.0 57 0.0 0.002255554302469832 0.0 14.239314311492048 0.0 58 0.0 0.002255554302469832 0.0 14.920491710837938 0.0 59 0.0 0.002255554302469832 0.0 15.608435773091237 0.0 60 0.0 0.002255554302469832 0.0 16.31367241833014 0.0 61 0.0 0.002255554302469832 0.0 16.986579451900305 0.0 62 0.0 0.002255554302469832 0.0 17.591819856396377 0.0 63 0.0 0.002255554302469832 0.0 18.206082478102328 0.0 64 0.0 0.002255554302469832 0.0 18.84891545430623 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGT 15 0.0022205692 70.0 34 ACATTGA 15 0.0022205692 70.0 28 CATCGTT 15 0.0022205692 70.0 32 ATGCGTG 15 0.0022205692 70.0 7 TCGCCGG 25 2.3833304E-4 56.000004 52 CGGTAAG 25 2.3833304E-4 56.000004 28 ATCTCGG 45 2.6793714E-8 54.444443 42 CATCTTA 20 0.0069385963 52.5 9 AAACGAC 20 0.0069385963 52.5 1 TTCCACG 20 0.0069385963 52.5 34 GTGTAAT 20 0.0069385963 52.5 8 CGGACTT 20 0.0069385963 52.5 39 CGGTGGT 50 6.1460014E-8 49.000004 46 GTAGATC 65 1.8371793E-10 48.46154 38 TCGTTCG 30 5.8605673E-4 46.666664 23 GCCGGAT 30 5.8605673E-4 46.666664 54 TTCGGTA 30 5.8605673E-4 46.666664 26 CCGAAGA 30 5.8605673E-4 46.666664 21 GATCTCG 45 1.6744889E-6 46.666664 41 GTAAGCA 40 4.5728186E-5 43.75 30 >>END_MODULE