##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779774_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 252060 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.310485598666983 34.0 31.0 34.0 21.0 34.0 2 28.67101880504642 34.0 23.0 34.0 12.0 34.0 3 27.45838292470047 33.0 23.0 34.0 11.0 34.0 4 29.99337459335079 34.0 31.0 34.0 21.0 34.0 5 29.588891533761803 34.0 31.0 34.0 11.0 34.0 6 32.13428152027295 37.0 31.0 38.0 12.0 38.0 7 33.17226057287947 37.0 34.0 38.0 21.0 38.0 8 32.37145917638657 37.0 31.0 38.0 12.0 38.0 9 33.715567721970956 37.0 34.0 38.0 21.0 38.0 10-11 33.538613822105845 38.0 34.0 38.0 21.0 38.0 12-13 32.41582758073474 37.5 30.0 38.0 16.0 38.0 14-15 32.54087122113782 37.0 32.5 38.0 16.0 38.0 16-17 32.17952273268269 36.5 30.0 38.0 16.0 38.0 18-19 32.813925255891455 37.0 32.0 38.0 16.0 38.0 20-21 31.659727842577166 36.5 28.5 38.0 16.0 38.0 22-23 31.63316670633976 36.5 28.5 38.0 16.0 38.0 24-25 32.91217368880425 37.0 32.5 38.0 16.5 38.0 26-27 31.43203007220503 37.0 28.0 38.0 11.0 38.0 28-29 33.60992819170039 37.5 34.0 38.0 21.0 38.0 30-31 34.0581746409585 38.0 34.5 38.0 21.5 38.0 32-33 34.1151947948901 38.0 35.0 38.0 22.0 38.0 34-35 34.18909783384908 38.0 35.0 38.0 22.0 38.0 36-37 32.045985082916765 37.0 30.0 38.0 16.0 38.0 38-39 30.181768229786556 35.0 24.0 38.0 11.0 38.0 40-41 31.547437118146473 36.5 28.5 38.0 11.0 38.0 42-43 32.60251725779577 37.0 30.5 38.0 16.0 38.0 44-45 34.230119812743 38.0 35.5 38.0 23.0 38.0 46-47 32.7536935650242 37.5 31.0 38.0 17.0 38.0 48-49 32.256688883599146 37.0 30.0 38.0 16.0 38.0 50-51 29.98416051733714 35.0 23.5 38.0 11.0 38.0 52-53 33.47498214710783 37.0 34.0 38.0 21.5 38.0 54-55 32.5238455129731 37.0 30.5 38.0 16.0 38.0 56-57 32.934257716416724 37.5 31.0 38.0 17.0 38.0 58-59 34.0426941997937 38.0 35.0 38.0 22.0 38.0 60-61 34.45733952233595 38.0 36.0 38.0 23.0 38.0 62-63 34.35262437514878 38.0 36.0 38.0 23.0 38.0 64-65 34.05411608347219 38.0 35.0 38.0 22.5 38.0 66-67 31.919350551456002 37.0 28.5 38.0 11.0 38.0 68-69 32.05828969293026 37.0 29.0 38.0 11.0 38.0 70-71 31.649994049035946 37.0 28.0 38.0 11.0 38.0 72-73 30.378338490835514 35.5 24.5 38.0 11.0 38.0 74-75 32.692769578671744 37.0 31.0 38.0 16.0 38.0 76 33.131389351741646 37.0 34.0 38.0 21.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 1.0 5 2.0 6 2.0 7 2.0 8 2.0 9 1.0 10 0.0 11 9.0 12 53.0 13 285.0 14 801.0 15 1426.0 16 2272.0 17 3513.0 18 4539.0 19 4667.0 20 4213.0 21 3437.0 22 2865.0 23 2459.0 24 2668.0 25 2818.0 26 3355.0 27 3908.0 28 4885.0 29 6358.0 30 8009.0 31 10702.0 32 14315.0 33 19894.0 34 28545.0 35 39727.0 36 47980.0 37 28345.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.239546139807985 18.21709116876934 10.942235975561374 28.6011267158613 2 23.23216694437832 18.23018328969293 35.303895897802114 23.233753868126637 3 20.802189954772672 19.000238038562248 34.196223121479015 26.001348885186065 4 14.630246766642863 18.829247004681427 34.58938348012378 31.95112274855193 5 14.043878441640878 30.534396572244702 38.65468539236689 16.76703959374752 6 27.13837975085297 33.65944616361184 18.212330397524397 20.98984368801079 7 27.727921923351584 27.69856383400778 21.42148694755217 23.15202729508847 8 24.26662540566704 31.44127845620383 19.227625826211845 25.064470311917287 9 24.2759430593687 17.201609191754084 20.757224699665148 37.76522304921207 10-11 24.711268751165438 24.232794156738123 27.361526040364847 23.694411051731596 12-13 25.14054806803439 20.94791092208261 28.34349670103829 25.568044308844705 14-15 23.42216350464583 22.94726526855356 24.712363223753638 28.918208003046963 16-17 23.764672275375574 24.315359940646346 27.184648986207023 24.735318797771065 18-19 22.128105280489425 24.493305904967457 27.854537086813952 25.524051727729162 20-21 23.119984923775803 24.114023864075936 28.393886194344432 24.37210501780383 22-23 23.772512938926678 23.34719965721019 28.750106625881028 24.1301807779821 24-25 22.48169043141549 25.607409523356107 25.268196497575918 26.642703547652484 26-27 22.164849268709744 24.76964307322424 28.51010396561061 24.555403692455403 28-29 22.618943710028088 25.86351229111453 27.264612064177236 24.252931934680145 30-31 22.754765414073766 25.38915812505827 27.09258660466851 24.763489856199453 32-33 22.332672088871256 25.734179726244793 26.96726839912716 24.965879785756794 34-35 23.073199761951994 25.386232890299542 27.114064669708394 24.42650267804007 36-37 23.23025132067836 23.753166553262567 30.216803512022487 22.799778614036583 38-39 22.973844215872006 22.811573215366153 32.71645225602317 21.49813031273867 40-41 22.749634990160605 23.350909350599885 26.795888084809246 27.103567574430265 42-43 20.947172348946957 24.103818405073486 27.750039177879476 27.19897006810008 44-45 21.088516343019922 23.817742149855484 29.519598332867155 25.574143174257436 46-47 21.972295344403822 22.829263067269984 30.4951567437607 24.703284844565495 48-49 21.891688157111684 23.394366197183096 30.904979170799447 23.808966474905773 50-51 22.498135305413168 22.17141700918858 32.963832859886054 22.366614825512197 52-53 19.782818283891494 24.775339520010156 29.738302776863044 25.703539419235298 54-55 20.65448110868211 24.11931108086984 29.666887524945746 25.559320285502306 56-57 20.774086299652453 24.26860330408011 29.226508815641218 25.730801580626224 58-59 19.501328112136704 24.83480427455718 29.33709449929478 26.32677311401134 60-61 19.582501815123248 24.358160516407523 29.30620633289559 26.753131335573638 62-63 19.62332795740519 25.00580243166521 28.76875375670255 26.602115854227048 64-65 20.131601394966854 25.176850533031274 27.52024407952422 27.171303992477654 66-67 19.402532067431867 24.056029232643116 24.886628287581285 31.654810412343732 68-69 19.49764776612188 24.565615519386334 25.16582703193919 30.770909682552595 70-71 19.669308364494785 24.40631230224462 24.8036580406471 31.120721292613496 72-73 19.68811805570709 23.926356027859498 23.175316057694786 33.21020985873863 74-75 20.502321964534744 26.406320980601034 24.782830356735484 28.308526698128738 76 21.263013394274108 25.738351425125373 25.284866374658794 27.713768805941726 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.5 2 0.5 3 0.5 4 1.0 5 1.0 6 1.5 7 1.0 8 0.0 9 0.0 10 1.0 11 2.5 12 3.0 13 2.5 14 3.5 15 3.5 16 5.5 17 9.0 18 14.0 19 21.0 20 37.0 21 51.0 22 67.5 23 99.0 24 190.0 25 266.0 26 337.5 27 527.0 28 820.0 29 995.0 30 1217.0 31 1730.5 32 2490.5 33 2959.0 34 3520.0 35 4709.5 36 6139.0 37 6940.0 38 7812.0 39 9741.0 40 11792.5 41 13697.0 42 14607.0 43 15309.0 44 16377.0 45 17050.0 46 17357.0 47 17418.0 48 16937.5 49 15576.5 50 14757.0 51 13726.5 52 11654.0 53 9725.0 54 8838.0 55 8081.0 56 6503.0 57 5175.0 58 4668.0 59 4202.0 60 3471.5 61 3065.0 62 2923.0 63 2742.5 64 2487.0 65 2306.0 66 2133.0 67 2066.0 68 1934.5 69 1775.0 70 1683.0 71 1619.0 72 1552.5 73 1417.0 74 1218.5 75 1089.0 76 968.0 77 771.0 78 622.5 79 550.0 80 433.0 81 280.0 82 201.0 83 158.0 84 113.5 85 65.5 86 44.5 87 27.0 88 23.0 89 14.0 90 7.5 91 4.0 92 2.0 93 1.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 2.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.00238038562247084 9 0.003173847496627787 10-11 0.00357057843370626 12-13 0.004364040307863208 14-15 0.00238038562247084 16-17 0.004562405776402444 18-19 0.003768943902245497 20-21 0.0029754820280885504 22-23 0.00416567483932397 24-25 0.00238038562247084 26-27 0.002182020153931604 28-29 0.003173847496627787 30-31 0.003768943902245497 32-33 0.003967309370784734 34-35 0.003967309370784734 36-37 0.004562405776402444 38-39 0.004959136713480917 40-41 0.00476077124494168 42-43 0.00178528921685313 44-45 0.00416567483932397 46-47 0.003372212965167024 48-49 0.003967309370784734 50-51 0.003173847496627787 52-53 0.005157502182020154 54-55 0.005157502182020154 56-57 0.003173847496627787 58-59 0.00416567483932397 60-61 0.004364040307863208 62-63 0.00416567483932397 64-65 0.004364040307863208 66-67 0.005157502182020154 68-69 0.02598587637864001 70-71 0.004959136713480917 72-73 0.003768943902245497 74-75 0.00416567483932397 76 0.00476077124494168 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 252060.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 91.8922281190691 #Duplication Level Percentage of deduplicated Percentage of total 1 95.69021233448237 87.93186820602415 2 2.681789352483545 4.928711978914172 3 0.7249313821249255 1.9984667981068713 4 0.3390408227832278 1.2462086651549302 5 0.1939881875082884 0.8913003389458194 6 0.11680780970749598 0.6440237937438023 7 0.06649264762061584 0.4277110280376156 8 0.039997650923544646 0.29403786103146085 9 0.032487258260728465 0.26867938923521756 >10 0.11425255410523383 1.368991940805954 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 7.934618741569468E-4 0.0 4 0.0 0.0 0.0 7.934618741569468E-4 0.0 5 0.0 0.0 0.0 0.0015869237483138936 0.0 6 0.0 0.0 0.0 0.0015869237483138936 0.0 7 0.0 0.0 0.0 0.001983654685392367 0.0 8 0.0 0.0 0.0 0.0035705784337062606 0.0 9 0.0 0.0 0.0 0.006347694993255574 0.0 10 0.0 0.0 0.0 0.006744425930334048 0.0 11 0.0 0.0 0.0 0.007141156867412521 0.0 12 0.0 0.0 0.0 0.007141156867412521 0.0 13 0.0 0.0 0.0 0.007141156867412521 0.0 14 0.0 0.0 0.0 0.007141156867412521 0.0 15 0.0 0.0 0.0 0.007537887804490994 0.0 16 0.0 0.0 0.0 0.007537887804490994 0.0 17 0.0 0.0 0.0 0.007934618741569468 0.0 18 0.0 0.0 0.0 0.009124811552804887 0.0 19 0.0 0.0 0.0 0.011108466238197254 0.0 20 0.0 0.0 0.0 0.011901928112354201 0.0 21 0.0 0.0 0.0 0.012298659049432675 0.0 22 0.0 0.0 0.0 0.017059430294374355 0.0 23 0.0 0.0 0.0 0.01904308497976672 0.0 24 0.0 0.0 0.0 0.023010394350551456 0.0 25 0.0 0.0 0.0 0.024200587161786875 0.0 26 0.0 0.0 0.0 0.027771165595493138 0.0 27 0.0 0.0 0.0 0.067047528366262 0.0 28 0.0 0.0 0.0 0.09164484646512736 0.0 29 0.0 0.0 0.0 0.10751408394826628 0.0 30 0.0 0.0 0.0 0.141632944537015 0.0 31 0.0 0.0 0.0 0.16067602951678173 0.0 32 0.0 0.0 0.0 0.21106085852574782 0.0 33 0.0 0.0 0.0 0.25232087598190905 0.0 34 0.0 0.0 3.967309370784734E-4 0.3027057049908752 0.0 35 0.0 0.0 3.967309370784734E-4 0.4126001745616123 0.0 36 0.0 0.0 3.967309370784734E-4 0.5046417519638181 0.0 37 0.0 0.0 3.967309370784734E-4 0.7652939776243751 0.0 38 0.0 0.0 3.967309370784734E-4 1.0826787272871539 0.0 39 0.0 0.0 3.967309370784734E-4 1.4444973419027216 0.0 40 0.0 0.0 3.967309370784734E-4 1.9229548520193604 0.0 41 0.0 0.0 3.967309370784734E-4 2.6454018884392605 3.967309370784734E-4 42 0.0 0.0 3.967309370784734E-4 3.390065857335555 3.967309370784734E-4 43 0.0 0.0 3.967309370784734E-4 4.19701658335317 3.967309370784734E-4 44 0.0 0.0 3.967309370784734E-4 4.925414583829247 3.967309370784734E-4 45 0.0 0.0 3.967309370784734E-4 5.385622470840276 3.967309370784734E-4 46 0.0 0.0 3.967309370784734E-4 5.942235975561374 3.967309370784734E-4 47 0.0 0.0 3.967309370784734E-4 6.551614694913909 7.934618741569468E-4 48 0.0 0.0 3.967309370784734E-4 7.036023169086725 7.934618741569468E-4 49 0.0 0.0 3.967309370784734E-4 7.472823930810125 7.934618741569468E-4 50 0.0 0.0 3.967309370784734E-4 8.114734587003095 7.934618741569468E-4 51 0.0 0.0 3.967309370784734E-4 8.860985479647702 7.934618741569468E-4 52 0.0 0.0 3.967309370784734E-4 9.56597635483615 7.934618741569468E-4 53 0.0 0.0 3.967309370784734E-4 10.651035467745775 7.934618741569468E-4 54 0.0 0.0 3.967309370784734E-4 11.637705308259939 7.934618741569468E-4 55 0.0 0.0 3.967309370784734E-4 12.132428786796794 7.934618741569468E-4 56 0.0 0.0 3.967309370784734E-4 12.633499960326906 7.934618741569468E-4 57 0.0 0.0 3.967309370784734E-4 13.04570340395144 7.934618741569468E-4 58 0.0 0.0 3.967309370784734E-4 13.442831071966992 7.934618741569468E-4 59 0.0 0.0 3.967309370784734E-4 13.899468380544315 7.934618741569468E-4 60 0.0 0.0 3.967309370784734E-4 14.21010870427676 7.934618741569468E-4 61 0.0 0.0 3.967309370784734E-4 14.54494961517099 7.934618741569468E-4 62 0.0 0.0 3.967309370784734E-4 14.79965087677537 7.934618741569468E-4 63 0.0 0.0 3.967309370784734E-4 15.179719114496548 7.934618741569468E-4 64 0.0 0.0 3.967309370784734E-4 15.613742759660399 7.934618741569468E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTGGT 130 0.0 53.844013 46 GTATCAC 20 0.0069468636 52.497917 57 TTCCGGT 35 2.0832846E-5 49.998016 43 GCCGAAA 115 0.0 48.69372 70 GCCGTAT 110 0.0 47.72538 54 CTTCCGA 75 1.4551915E-11 46.664818 18 ATCTCGG 115 0.0 45.650364 42 AGATCTC 100 0.0 45.498196 40 TCTCGTT 100 0.0 45.498196 43 TCTCGGT 155 0.0 45.1595 43 TCGGTGG 165 0.0 42.42256 45 TGGTCGC 135 0.0 41.479836 49 GTAGATC 95 3.6379788E-12 40.524708 38 GATCTCG 140 0.0 39.998413 41 TCGTGTC 45 9.1836126E-5 38.887344 34 CTCGGTG 180 0.0 38.887344 44 CGTATCA 110 0.0 38.1803 56 CTGTGTA 65 4.8515176E-7 37.69081 34 CGTGTAC 75 3.5246558E-8 37.331852 35 CCGTGTA 85 2.562956E-9 37.057354 34 >>END_MODULE