##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779772_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 173496 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.136637155899848 34.0 23.0 34.0 12.0 34.0 2 27.782029556877394 34.0 23.0 34.0 12.0 34.0 3 26.743815419375665 32.0 21.0 34.0 11.0 34.0 4 28.84725872642597 34.0 23.0 34.0 12.0 34.0 5 28.55596670816618 34.0 23.0 34.0 11.0 34.0 6 30.810364504080784 36.0 26.0 38.0 11.0 38.0 7 31.833241112187025 37.0 28.0 38.0 12.0 38.0 8 31.04298658182321 37.0 27.0 38.0 11.0 38.0 9 32.46246022963066 37.0 31.0 38.0 12.0 38.0 10-11 32.10720708258404 37.0 31.0 38.0 11.0 38.0 12-13 31.248440886245213 36.0 27.5 38.0 11.0 38.0 14-15 31.138939802646746 36.5 26.5 38.0 11.0 38.0 16-17 30.883121224696822 36.0 27.0 38.0 11.0 38.0 18-19 31.459892447088116 37.0 27.5 38.0 11.5 38.0 20-21 30.328503250795407 35.5 25.0 38.0 11.0 38.0 22-23 30.343722621847192 35.5 26.0 38.0 11.0 38.0 24-25 31.446652948771153 36.5 28.5 38.0 11.0 38.0 26-27 30.08033326416747 35.5 24.0 38.0 11.0 38.0 28-29 32.035833679162636 37.0 31.0 38.0 11.0 38.0 30-31 32.4751636925347 37.5 31.0 38.0 11.0 38.0 32-33 32.562085004841606 38.0 31.5 38.0 11.0 38.0 34-35 32.619449439756536 38.0 32.0 38.0 11.0 38.0 36-37 30.707036473463365 36.5 25.0 38.0 11.0 38.0 38-39 29.11251556231844 34.0 23.0 37.5 11.0 38.0 40-41 30.18302151058238 35.0 25.0 38.0 11.0 38.0 42-43 31.14657686632545 36.5 28.0 38.0 11.0 38.0 44-45 32.68822624152718 37.5 32.0 38.0 11.0 38.0 46-47 31.337540923133673 37.0 28.5 38.0 11.0 38.0 48-49 30.79879939595149 36.0 26.0 38.0 11.0 38.0 50-51 28.750435168534146 34.0 21.5 37.5 11.0 38.0 52-53 31.85757308525845 36.5 29.0 38.0 11.0 38.0 54-55 30.989455088301746 36.5 27.0 38.0 11.0 38.0 56-57 31.379933831327524 36.5 28.0 38.0 11.0 38.0 58-59 32.39328572416655 37.0 31.5 38.0 11.0 38.0 60-61 32.8510484391571 38.0 34.0 38.0 11.0 38.0 62-63 32.76863443537603 38.0 33.0 38.0 11.0 38.0 64-65 32.527046733065895 37.5 32.5 38.0 11.0 38.0 66-67 30.54574457048001 36.5 25.0 38.0 11.0 38.0 68-69 30.65343293217135 36.5 25.0 38.0 11.0 38.0 70-71 30.29143034997925 35.5 24.0 38.0 11.0 38.0 72-73 29.18631265274127 34.0 22.5 37.5 11.0 38.0 74-75 31.11263660257297 36.5 27.0 38.0 11.0 38.0 76 31.354209895329 37.0 27.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 1.0 5 5.0 6 1.0 7 1.0 8 0.0 9 0.0 10 0.0 11 12.0 12 52.0 13 297.0 14 800.0 15 1497.0 16 2541.0 17 3857.0 18 5184.0 19 5520.0 20 4864.0 21 3970.0 22 3090.0 23 2645.0 24 2492.0 25 2453.0 26 2815.0 27 3178.0 28 3830.0 29 4447.0 30 5608.0 31 7062.0 32 9445.0 33 12804.0 34 17519.0 35 23414.0 36 28016.0 37 16074.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.6568220592982 17.60674597685249 11.244639645870798 31.49179231797851 2 21.165905842209618 16.57848019550883 38.817033245723245 23.438580716558306 3 19.835615806704475 16.91624014386499 37.380688891962926 25.867455157467607 4 14.346728454834693 19.363558814036057 32.98692765251072 33.30278507861853 5 14.495435053257713 28.65483930465256 39.705814543274776 17.14391109881496 6 27.18103011020427 32.889519066722 17.296652372388987 22.632798450684742 7 27.27325125651312 26.36660211186425 20.16415364042975 26.195992991192877 8 23.77065716739583 32.28253413800458 17.732164369664584 26.21464432493501 9 23.034180644417546 16.436105827425212 19.56251080753934 40.9672027206179 10-11 24.357078833677743 23.708897861780954 27.08209043407086 24.851932870470442 12-13 24.159079577255735 19.640546328079292 29.107043528133474 27.0933305665315 14-15 23.68082034255873 22.584205869553315 23.65661124512576 30.0783625427622 16-17 25.012681430926552 22.72973564980805 26.042183050691136 26.215399868574263 18-19 22.12503134285772 22.66946038406889 27.84485069271318 27.360657580360204 20-21 24.341024502994426 22.204289609139487 27.199130780625865 26.25555510724023 22-23 25.200737815949502 21.654033489927084 27.39862235928178 25.746606334841626 24-25 22.475329705800977 24.82102508530849 24.182940606843125 28.520704602047402 26-27 23.379733702230677 24.048071934981845 27.3214594501124 25.25073491267508 28-29 23.173293907088944 25.049787161685067 26.128821218697496 25.648097712528497 30-31 22.769495032754712 24.334458300789976 26.430298611131125 26.46574805532419 32-33 22.744132828779186 24.30419658013736 26.468341917094413 26.483328673989043 34-35 23.302610570244457 24.237262734383556 26.465959985474413 25.99416670989757 36-37 24.301734747108515 21.601477950352628 30.428253983808258 23.6685333187306 38-39 23.87604584874066 20.79880795579983 33.39164819709079 21.93349799836872 40-41 23.288670104073297 23.134476765801935 25.911397913922652 27.66545521620212 42-43 20.747762131753234 23.806134035771308 27.53601051351367 27.910093318961792 44-45 20.881692600779896 21.944323556283127 29.788251976401348 27.38573186653563 46-47 23.120885835168256 21.252147147320244 29.601812249979826 26.02515476753167 48-49 23.145383489157627 21.9158894665852 30.4710466550615 24.46768038919567 50-51 25.115930542546295 20.359391887023563 31.56308091361049 22.961596656819655 52-53 19.60814830186069 23.225196559913304 29.84309792257499 27.32355721565101 54-55 21.73975698047082 22.391978510986604 29.117382582831848 26.75088192571073 56-57 21.809514751698238 23.05138380930148 28.05402087170043 27.08508056729985 58-59 19.56514847147728 23.93009173730218 29.061962307871887 27.442797483348656 60-61 19.484906302058416 23.169993601678552 28.801669327830393 28.543430768432643 62-63 19.412332656031587 23.57442393324975 28.53083164007897 28.482411770639686 64-65 19.869672105161527 24.206922192344603 27.580402973159142 28.343002729334728 66-67 19.002712120382405 25.04950124077346 23.79143477220783 32.15635186663631 68-69 19.437397661493048 25.427803786813037 23.88523096792048 31.249567583773434 70-71 19.289841914890552 25.7847333304512 23.06860922571441 31.856815528943844 72-73 18.787899748679994 25.62397685089115 21.893949874339995 33.69417352608886 74-75 20.38948836780337 25.76923520324641 23.958981808120633 29.882294620829587 76 21.45096954185977 25.096838901570173 24.559037144635816 28.89315441193424 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.5 3 1.0 4 1.0 5 0.5 6 1.0 7 1.0 8 0.0 9 0.0 10 1.0 11 1.0 12 0.0 13 0.5 14 1.0 15 3.5 16 9.5 17 13.0 18 13.0 19 15.0 20 22.5 21 28.0 22 39.0 23 66.5 24 124.0 25 165.0 26 222.5 27 363.0 28 550.5 29 655.0 30 790.5 31 1089.0 32 1557.0 33 1862.0 34 2110.0 35 2858.5 36 3831.5 37 4304.0 38 4880.0 39 6081.5 40 7414.5 41 8608.0 42 9094.0 43 9470.0 44 10205.5 45 10755.5 46 10946.0 47 10753.5 48 10377.0 49 9851.5 50 9510.0 51 8917.0 52 7840.0 53 6835.5 54 6315.0 55 5828.0 56 4919.5 57 4144.0 58 3790.0 59 3598.0 60 3215.5 61 2897.0 62 2769.0 63 2632.0 64 2461.0 65 2300.0 66 2100.5 67 2028.0 68 2019.5 69 1879.5 70 1722.0 71 1696.0 72 1593.5 73 1413.5 74 1264.5 75 1193.0 76 1058.5 77 833.5 78 654.0 79 565.0 80 470.5 81 307.0 82 202.5 83 167.0 84 126.0 85 76.5 86 51.0 87 34.0 88 25.0 89 13.5 90 7.5 91 5.0 92 6.0 93 4.5 94 2.0 95 1.5 96 2.0 97 1.5 98 0.5 99 2.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.005187439479872735 9 0.003458292986581823 10-11 0.00605201272651819 12-13 0.00605201272651819 14-15 0.0043228662332272785 16-17 0.008069350302024254 18-19 0.006628394890948494 20-21 0.004034675151012127 22-23 0.006340203808733343 24-25 0.004611057315442431 26-27 0.003458292986581823 28-29 0.0043228662332272785 30-31 0.005475630562087887 32-33 0.005475630562087887 34-35 0.005187439479872735 36-37 0.007204777055378798 38-39 0.007204777055378798 40-41 0.007204777055378798 42-43 0.0028819108221515193 44-45 0.006628394890948494 46-47 0.005763821644303039 48-49 0.005763821644303039 50-51 0.004899248397657583 52-53 0.006916585973163646 54-55 0.006916585973163646 56-57 0.0043228662332272785 58-59 0.006628394890948494 60-61 0.00749296813759395 62-63 0.0077811592198091025 64-65 0.00605201272651819 66-67 0.00893392354866971 68-69 0.0299718725503758 70-71 0.0077811592198091025 72-73 0.006916585973163646 74-75 0.006916585973163646 76 0.006916585973163646 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 173496.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 89.84523677611132 #Duplication Level Percentage of deduplicated Percentage of total 1 93.33389778136123 83.85606145403771 2 4.532232736841612 8.143990467319554 3 1.0717441849442904 2.8887333017922066 4 0.49356221936590167 1.7737685785068975 5 0.2434973996363353 1.0938540762346973 6 0.13146653180290616 0.7086985006779764 7 0.08445195179885145 0.5311323923900785 8 0.03672607139158833 0.2639730064026898 9 0.02182875304452796 0.1765088537231588 >10 0.05059236981276668 0.5632793689150385 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.763821644303039E-4 0.0 2 0.0 0.0 0.0 5.763821644303039E-4 0.0 3 0.0 0.0 0.0 5.763821644303039E-4 0.0 4 0.0 0.0 0.0 0.0011527643288606077 0.0 5 0.0 0.0 0.0 0.0017291464932909116 0.0 6 0.0 5.763821644303039E-4 0.0 0.0017291464932909116 0.0 7 0.0 5.763821644303039E-4 0.0 0.0028819108221515193 0.0 8 0.0 5.763821644303039E-4 0.0 0.0028819108221515193 0.0 9 0.0 5.763821644303039E-4 0.0 0.004034675151012127 0.0 10 0.0 5.763821644303039E-4 0.0 0.004034675151012127 0.0 11 0.0 5.763821644303039E-4 0.0 0.005187439479872735 0.0 12 0.0 5.763821644303039E-4 0.0 0.005187439479872735 5.763821644303039E-4 13 0.0 5.763821644303039E-4 0.0 0.005187439479872735 5.763821644303039E-4 14 0.0 5.763821644303039E-4 0.0 0.005763821644303039 5.763821644303039E-4 15 0.0 5.763821644303039E-4 0.0 0.005763821644303039 5.763821644303039E-4 16 0.0 5.763821644303039E-4 0.0 0.005763821644303039 5.763821644303039E-4 17 0.0 5.763821644303039E-4 0.0 0.005763821644303039 5.763821644303039E-4 18 0.0 5.763821644303039E-4 0.0 0.006916585973163646 5.763821644303039E-4 19 0.0 5.763821644303039E-4 0.0 0.009798496795315166 5.763821644303039E-4 20 0.0 5.763821644303039E-4 0.0 0.010951261124175774 5.763821644303039E-4 21 0.0 5.763821644303039E-4 0.0 0.01325678978189699 5.763821644303039E-4 22 0.0 5.763821644303039E-4 0.0 0.01786784709733942 5.763821644303039E-4 23 0.0 5.763821644303039E-4 0.0 0.02247890441278185 5.763821644303039E-4 24 0.0 5.763821644303039E-4 0.0 0.02536081523493337 5.763821644303039E-4 25 0.0 5.763821644303039E-4 0.0 0.028819108221515195 5.763821644303039E-4 26 0.0 5.763821644303039E-4 0.0 0.032277401208097016 5.763821644303039E-4 27 0.0 5.763821644303039E-4 0.0 0.06570756674505464 5.763821644303039E-4 28 0.0 5.763821644303039E-4 0.0 0.104325171761885 5.763821644303039E-4 29 0.0 5.763821644303039E-4 0.0 0.12968598699681838 5.763821644303039E-4 30 0.0 5.763821644303039E-4 0.0 0.16945635634250933 5.763821644303039E-4 31 0.0 5.763821644303039E-4 0.0 0.18559505694655784 5.763821644303039E-4 32 0.0 5.763821644303039E-4 0.0 0.23343477659427306 5.763821644303039E-4 33 0.0 5.763821644303039E-4 0.0 0.2824272605708489 5.763821644303039E-4 34 0.0 0.0011527643288606077 0.0 0.3435237700004611 5.763821644303039E-4 35 0.0 0.0011527643288606077 0.0 0.46514040669525525 5.763821644303039E-4 36 0.0 0.0011527643288606077 0.0 0.5556324065108129 5.763821644303039E-4 37 0.0 0.0011527643288606077 0.0 0.8737953612763406 5.763821644303039E-4 38 0.0 0.0011527643288606077 0.0 1.1902291695485774 5.763821644303039E-4 39 0.0 0.0011527643288606077 0.0 1.578134366210172 5.763821644303039E-4 40 0.0 0.0011527643288606077 0.0 2.0813159957578273 5.763821644303039E-4 41 0.0 0.0011527643288606077 0.0 2.6888227970673677 5.763821644303039E-4 42 0.0 0.0011527643288606077 0.0 3.302093420021211 5.763821644303039E-4 43 0.0 0.0011527643288606077 0.0 3.928044450592521 5.763821644303039E-4 44 0.0 0.0011527643288606077 0.0 4.651404066952552 5.763821644303039E-4 45 0.0 0.0011527643288606077 0.0 5.100405773043759 0.0011527643288606077 46 0.0 0.0011527643288606077 0.0 5.675635173145202 0.0011527643288606077 47 0.0 0.0011527643288606077 0.0 6.388619910545488 0.0011527643288606077 48 0.0 0.0011527643288606077 0.0 6.868746253515932 0.0011527643288606077 49 0.0 0.0011527643288606077 0.0 7.296998201687647 0.0011527643288606077 50 0.0 0.0011527643288606077 0.0 7.978858302208696 0.0011527643288606077 51 0.0 0.0011527643288606077 0.0 8.713169179692903 0.0011527643288606077 52 0.0 0.0011527643288606077 5.763821644303039E-4 9.377737815281044 0.0011527643288606077 53 0.0 0.0011527643288606077 5.763821644303039E-4 10.230207036473463 0.0011527643288606077 54 0.0 0.0011527643288606077 5.763821644303039E-4 10.995642550836907 0.0011527643288606077 55 0.0 0.0011527643288606077 5.763821644303039E-4 11.468275925669756 0.0011527643288606077 56 0.0 0.0011527643288606077 5.763821644303039E-4 11.996241988287915 0.0011527643288606077 57 0.0 0.0011527643288606077 5.763821644303039E-4 12.47982662424494 0.0011527643288606077 58 0.0 0.0011527643288606077 5.763821644303039E-4 12.9184534513764 0.0011527643288606077 59 0.0 0.0011527643288606077 5.763821644303039E-4 13.40953105547102 0.0011527643288606077 60 0.0 0.0011527643288606077 5.763821644303039E-4 13.717895513441231 0.0011527643288606077 61 0.0 0.0011527643288606077 5.763821644303039E-4 14.051620786646378 0.0011527643288606077 62 0.0 0.0011527643288606077 5.763821644303039E-4 14.316180200119888 0.0011527643288606077 63 0.0 0.0011527643288606077 5.763821644303039E-4 14.647023562502882 0.0011527643288606077 64 0.0 0.0011527643288606077 5.763821644303039E-4 14.974408631899294 0.0011527643288606077 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAGAC 20 0.0069277775 52.52748 67 CCGCTTT 20 0.006943606 52.49719 15 TAACGCG 20 0.006943606 52.49719 23 CCGTCAA 20 0.006943606 52.49719 21 TACGAGA 20 0.006943606 52.49719 23 TATCGAG 20 0.006943606 52.49719 3 AGATCTC 150 0.0 51.330585 40 GTGTATC 35 2.080739E-5 49.997322 36 TCGGTGG 145 0.0 48.273273 45 GTAGATC 125 0.0 47.597454 38 TTGGCAA 30 5.8670744E-4 46.664165 28 TGGCAAC 30 5.8670744E-4 46.664165 29 CTCGGTG 180 0.0 44.719826 44 ACGCTTC 105 0.0 43.331013 15 ATCTCGG 170 0.0 43.23298 42 GCCGACT 90 1.8189894E-12 42.775486 20 TGGTCGC 125 0.0 41.997753 49 GACGCTT 75 7.4942363E-10 41.99775 14 GCGTGTA 50 3.465033E-6 41.99775 34 CGACTAA 50 3.465033E-6 41.99775 22 >>END_MODULE