##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779771_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 169086 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.247554498894054 34.0 23.0 34.0 12.0 34.0 2 27.801107128916644 34.0 23.0 34.0 12.0 34.0 3 26.810132122115373 32.0 21.0 34.0 11.0 34.0 4 28.95949398530925 34.0 23.0 34.0 12.0 34.0 5 28.500839809327797 34.0 23.0 34.0 11.0 34.0 6 30.936381486344228 36.0 26.0 38.0 11.0 38.0 7 31.9274925186 37.0 28.0 38.0 12.0 38.0 8 31.21267284103947 37.0 27.0 38.0 11.0 38.0 9 32.55655701832204 37.0 31.0 38.0 12.0 38.0 10-11 32.25463965082857 37.0 31.0 38.0 11.0 38.0 12-13 31.337671362501922 36.0 28.0 38.0 11.0 38.0 14-15 31.28994712749725 36.5 27.0 38.0 11.0 38.0 16-17 30.993387980081142 36.0 27.0 38.0 11.0 38.0 18-19 31.586577244715706 37.0 27.5 38.0 11.5 38.0 20-21 30.49611144624629 35.5 25.0 38.0 11.0 38.0 22-23 30.4916344345481 35.5 26.0 38.0 11.0 38.0 24-25 31.576777497841334 36.5 28.5 38.0 11.0 38.0 26-27 30.215177483647373 35.5 24.5 38.0 11.0 38.0 28-29 32.234380729333 37.0 31.0 38.0 11.0 38.0 30-31 32.66804466366228 37.5 32.5 38.0 11.0 38.0 32-33 32.74941745620572 38.0 33.0 38.0 11.0 38.0 34-35 32.77318346876737 38.0 33.5 38.0 11.0 38.0 36-37 30.866133210319006 36.5 25.0 38.0 11.0 38.0 38-39 29.224684480087056 34.0 23.0 37.5 11.0 38.0 40-41 30.30712181966573 35.0 25.0 38.0 11.0 38.0 42-43 31.288013200383237 36.5 28.0 38.0 11.0 38.0 44-45 32.88272240161811 37.5 33.5 38.0 11.0 38.0 46-47 31.517097808215937 37.0 28.5 38.0 11.0 38.0 48-49 30.940536176856746 36.0 27.0 38.0 11.0 38.0 50-51 28.83557183918243 34.0 21.5 37.5 11.0 38.0 52-53 32.038211324414796 37.0 29.0 38.0 11.0 38.0 54-55 31.148025265249636 36.5 27.0 38.0 11.0 38.0 56-57 31.578563571200455 37.0 28.5 38.0 11.0 38.0 58-59 32.599490791668146 37.0 32.0 38.0 11.0 38.0 60-61 33.06440509563181 38.0 34.0 38.0 11.0 38.0 62-63 32.979471984670525 38.0 34.0 38.0 11.0 38.0 64-65 32.694764794246716 37.5 32.5 38.0 11.0 38.0 66-67 30.705910010290623 36.5 25.0 38.0 11.0 38.0 68-69 30.791138828761696 36.5 26.0 38.0 11.0 38.0 70-71 30.443437067527768 36.0 25.0 38.0 11.0 38.0 72-73 29.289950084572347 34.0 22.5 38.0 11.0 38.0 74-75 31.267390558650625 36.5 28.0 38.0 11.0 38.0 76 31.561406621482558 37.0 27.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 2.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.0 10 1.0 11 10.0 12 55.0 13 305.0 14 764.0 15 1382.0 16 2407.0 17 3634.0 18 4884.0 19 5151.0 20 4370.0 21 3563.0 22 2844.0 23 2379.0 24 2356.0 25 2334.0 26 2616.0 27 3017.0 28 3803.0 29 4405.0 30 5637.0 31 7232.0 32 9297.0 33 12869.0 34 17337.0 35 23291.0 36 27443.0 37 15693.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.42186816176383 18.61242208107117 11.661521355996356 31.304188401168638 2 20.135315756478953 16.50875885643992 38.94881894420591 24.40710644287522 3 20.61022201719835 17.837668405426825 35.570656352388724 25.9814532249861 4 15.125439125652035 18.87382751972369 33.50188661391245 32.498846740711826 5 14.048472375004437 29.483221555894634 38.77790000354849 17.69040606555244 6 26.335710821712027 33.844315910246856 17.36217072968785 22.457802538353263 7 26.827768117999124 26.617815786049704 20.81366878393244 25.740747312018737 8 22.898036432458007 32.13804116394606 18.47054648687012 26.49337591672581 9 23.220369056068133 16.534776437189496 20.303406671398154 39.94144783534422 10-11 24.751889660393427 23.826872804267854 26.842640674718176 24.578596860620543 12-13 24.114905546552478 19.727285631483692 28.81185015200085 27.34595866996298 14-15 23.81122768834057 22.42166522752274 23.81655054943755 29.950556534699142 16-17 24.84282123318054 22.738429690965546 26.29690965547834 26.121839420375576 18-19 22.469939731601578 22.36377508472471 28.038999982256605 27.127285201417106 20-21 24.21368582919328 22.30748757984386 27.57718239886444 25.901644192098416 22-23 25.32817596560178 21.304601117232526 27.502905455158405 25.864317462007293 24-25 22.791349631386417 24.65674431258668 24.16644241318433 28.385463642842566 26-27 23.311903762102187 23.945919411406365 27.425612576220864 25.31656425027058 28-29 23.185997202515964 24.619929560179916 26.624595976472747 25.56947726083138 30-31 23.139616035202685 23.99188540200381 26.597487550124793 26.27101101266871 32-33 22.84116549413438 24.342243395819104 26.618996501624988 26.197594608421532 34-35 23.33451620534658 24.366276318902294 26.45581973030518 25.843387745445945 36-37 24.261359435761705 21.645103576762136 30.388727063033222 23.704809924442934 38-39 23.923940204935608 20.950451715929084 33.25279827298132 21.872809806153985 40-41 23.351579296007476 22.792371590710825 26.2404740993089 27.615575013972798 42-43 21.08173645611545 23.440974686538915 27.421339011118995 28.055949846226643 44-45 20.677907960184292 22.24877128442917 29.719835106666114 27.353485648720422 46-47 22.97653759485211 21.47812560992199 30.085344720515263 25.459992074710634 48-49 22.989321528165913 21.85257143871042 30.451535825075332 24.706571208048334 50-51 24.516646064857255 20.660164775045985 31.67276835088923 23.15042080920753 52-53 19.55878221525632 23.499282873238602 29.83809199923112 27.103842912273958 54-55 21.41839021995635 22.771308086752345 29.276255478208412 26.534046215082892 56-57 21.519039747339285 22.936411945789136 28.56124745313623 26.983300853735354 58-59 19.686771785803003 24.137676102154035 28.76335182578455 27.412200286258415 60-61 19.489345091289767 23.150694653915078 28.665637549755434 28.694322705039717 62-63 19.49886589798109 23.99623838913155 28.262058890502228 28.24283682238513 64-65 20.181218136008233 24.088290611433777 27.254580726055426 28.475910526502563 66-67 19.00707667830834 24.996673103595118 23.71559619462196 32.28065402347458 68-69 19.704024042500325 25.523563306790347 23.77805648567744 30.99435616503189 70-71 19.541565750212182 25.6672315030859 22.895097160735883 31.896105585966033 72-73 18.901742992837583 25.47093927618777 21.895645179415297 33.73167255155935 74-75 20.552409398057105 25.798524345344592 24.172642723011638 29.476423533586672 76 21.434021185613656 25.018778426397443 24.634338200938032 28.91286218705087 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 1.5 6 2.0 7 1.0 8 0.0 9 0.5 10 0.5 11 0.0 12 0.0 13 0.5 14 0.5 15 1.5 16 3.0 17 3.0 18 4.0 19 10.0 20 19.5 21 24.0 22 31.5 23 54.5 24 94.5 25 119.0 26 167.5 27 299.0 28 457.5 29 533.0 30 690.0 31 1005.0 32 1446.0 33 1729.0 34 2053.0 35 2821.5 36 3717.5 37 4169.0 38 4760.0 39 5989.0 40 7357.0 41 8586.5 42 9086.0 43 9487.0 44 10208.0 45 10730.5 46 10933.0 47 10887.0 48 10422.5 49 9732.0 50 9460.0 51 8749.5 52 7509.0 53 6399.0 54 5819.0 55 5432.5 56 4653.5 57 3891.0 58 3521.0 59 3327.0 60 2964.5 61 2706.0 62 2616.0 63 2477.5 64 2299.0 65 2194.5 66 2111.0 67 2092.0 68 2002.5 69 1845.0 70 1691.5 71 1606.0 72 1548.5 73 1382.5 74 1204.0 75 1134.0 76 1040.0 77 814.0 78 591.0 79 500.0 80 429.5 81 304.0 82 193.5 83 138.0 84 116.0 85 79.5 86 47.0 87 29.0 88 20.0 89 10.0 90 5.0 91 0.5 92 0.0 93 1.5 94 2.5 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0035484901174550228 9 0.0035484901174550228 10-11 0.004731320156606697 12-13 0.004731320156606697 14-15 0.0023656600783033485 16-17 0.006505565215334209 18-19 0.005322735176182535 20-21 0.0035484901174550228 22-23 0.0044356126468187785 24-25 0.0038441976272429413 26-27 0.0029570750978791856 28-29 0.0032527826076671046 30-31 0.004731320156606697 32-33 0.0044356126468187785 34-35 0.0035484901174550228 36-37 0.005027027666394616 38-39 0.005027027666394616 40-41 0.0044356126468187785 42-43 0.0035484901174550228 44-45 0.00413990513703086 46-47 0.00413990513703086 48-49 0.0044356126468187785 50-51 0.00413990513703086 52-53 0.005027027666394616 54-55 0.00413990513703086 56-57 0.0032527826076671046 58-59 0.004731320156606697 60-61 0.005322735176182535 62-63 0.005618442685970453 64-65 0.004731320156606697 66-67 0.005618442685970453 68-69 0.03075358101794353 70-71 0.006209857705546291 72-73 0.005322735176182535 74-75 0.005027027666394616 76 0.005322735176182535 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 169086.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 88.55769125158297 #Duplication Level Percentage of deduplicated Percentage of total 1 92.77348591955632 82.15805722397147 2 4.706031241701844 8.335105234458709 3 1.2942971830231016 3.438599109658602 4 0.548867225045502 1.944256570147707 5 0.24100201248240566 1.0671290906213513 6 0.1592537530446156 0.8461886815668543 7 0.10631445286984889 0.6590473744980331 8 0.05560465310156118 0.3939375761215545 9 0.04268590136869123 0.3402148386783672 >10 0.0724576578061191 0.8174643002773414 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.914150195758371E-4 0.0 3 0.0 0.0 0.0 0.0029570750978791856 0.0 4 0.0 0.0 0.0 0.00413990513703086 0.0 5 0.0 0.0 0.0 0.004731320156606697 0.0 6 0.0 0.0 0.0 0.005322735176182534 0.0 7 0.0 0.0 0.0 0.005322735176182534 0.0 8 0.0 0.0 0.0 0.005322735176182534 0.0 9 0.0 0.0 0.0 0.005322735176182534 0.0 10 0.0 0.0 0.0 0.005322735176182534 0.0 11 0.0 0.0 0.0 0.00827981027406172 0.0 12 0.0 0.0 0.0 0.008871225293637557 0.0 13 0.0 0.0 0.0 0.008871225293637557 0.0 14 0.0 0.0 0.0 0.010645470352365068 0.0 15 0.0 0.0 0.0 0.011236885371940905 0.0 16 0.0 0.0 0.0 0.011828300391516743 0.0 17 0.0 0.0 0.0 0.013011130430668417 0.0 18 0.0 0.0 0.0 0.014193960469820091 0.0 19 0.0 0.0 0.0 0.017742450587275114 0.0 20 0.0 0.0 0.0 0.018925280626426788 0.0 21 0.0 0.0 0.0 0.021290940704730137 0.0 22 0.0 0.0 0.0 0.025430845841760998 5.914150195758371E-4 23 0.0 0.0 0.0 0.026022260861336834 5.914150195758371E-4 24 0.0 0.0 0.0 0.03252782607667104 5.914150195758371E-4 25 0.0 0.0 0.0 0.03430207113539856 5.914150195758371E-4 26 0.0 0.0 0.0 0.03607631619412607 5.914150195758371E-4 27 0.0 0.0 0.0 0.06742131223164544 5.914150195758371E-4 28 0.0 0.0 0.0 0.0969920632104373 5.914150195758371E-4 29 0.0 0.0 0.0 0.12478856913050164 5.914150195758371E-4 30 0.0 0.0 0.0 0.16441337544208273 5.914150195758371E-4 31 0.0 0.0 0.0 0.1845214861076612 5.914150195758371E-4 32 0.0 0.0 0.0 0.232426102693304 5.914150195758371E-4 33 0.0 0.0 0.0 0.28920194457258436 5.914150195758371E-4 34 0.0 0.0 0.0 0.3572146718238056 5.914150195758371E-4 35 0.0 0.0 0.0 0.49856286150243073 5.914150195758371E-4 36 0.0 0.0 0.0 0.6144802053392948 5.914150195758371E-4 37 0.0 0.0 0.0 0.9166932803425476 5.914150195758371E-4 38 0.0 0.0 0.0 1.2537998415007747 5.914150195758371E-4 39 0.0 0.0 0.0 1.6831671457128325 5.914150195758371E-4 40 0.0 0.0 0.0 2.167536046745443 5.914150195758371E-4 41 0.0 0.0 0.0 2.7554025762038252 5.914150195758371E-4 42 0.0 0.0 0.0 3.3077842044876573 5.914150195758371E-4 43 0.0 0.0 0.0 4.0056539275871454 5.914150195758371E-4 44 0.0 0.0 0.0 4.637285168494139 5.914150195758371E-4 45 0.0 0.0 0.0 5.0861691683522 5.914150195758371E-4 46 0.0 0.0 0.0 5.681724093065068 5.914150195758371E-4 47 0.0 0.0 0.0 6.426907017730622 5.914150195758371E-4 48 0.0 0.0 0.0 6.894716298215109 5.914150195758371E-4 49 0.0 0.0 0.0 7.349514448268928 5.914150195758371E-4 50 0.0 0.0 0.0 8.08227765752339 5.914150195758371E-4 51 0.0 0.0 0.0 8.78842719089694 5.914150195758371E-4 52 0.0 0.0 0.0 9.396993246040477 5.914150195758371E-4 53 0.0 0.0 0.0 10.15223022603882 5.914150195758371E-4 54 0.0 0.0 0.0 10.861336834510249 5.914150195758371E-4 55 0.0 0.0 0.0 11.314360739505341 5.914150195758371E-4 56 0.0 0.0 0.0 11.837763031829956 5.914150195758371E-4 57 0.0 0.0 0.0 12.259441940787529 5.914150195758371E-4 58 0.0 0.0 0.0 12.669292549353584 5.914150195758371E-4 59 0.0 0.0 0.0 13.182049371325833 5.914150195758371E-4 60 0.0 0.0 0.0 13.473616975976721 5.914150195758371E-4 61 0.0 0.0 0.0 13.787658351371492 5.914150195758371E-4 62 0.0 0.0 0.0 14.021267284103947 5.914150195758371E-4 63 0.0 0.0 0.0 14.312834888754836 5.914150195758371E-4 64 0.0 0.0 0.0 14.629241924227907 5.914150195758371E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCAGTGT 15 0.002222136 69.99586 33 GAGAGAC 15 0.002222136 69.99586 60 ATCTCGG 140 0.0 54.996746 42 TAGATCT 155 0.0 54.190346 39 TCGGTGG 110 0.0 54.08771 45 GCCGTAT 65 3.6379788E-12 53.842968 54 AGCAAGG 20 0.0069434587 52.496895 5 CTTCCGA 80 0.0 52.496895 18 ACGCATT 20 0.0069434587 52.496895 42 GCAACCG 20 0.0069434587 52.496895 28 TCCGGTG 20 0.0069434587 52.496895 44 AGATCTC 170 0.0 51.46754 40 GTAGATC 130 0.0 48.45867 38 TTCCGAC 95 0.0 47.891907 19 ACACTCG 30 5.849722E-4 46.691525 68 TCTCGGT 165 0.0 46.66391 43 CAGTGTA 45 1.677894E-6 46.663906 34 TTCGGTG 30 5.8668177E-4 46.663902 44 CGCGTAT 30 5.8668177E-4 46.663902 35 TTAGATC 55 1.3043427E-7 44.54282 38 >>END_MODULE