##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779769_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 248057 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.01670180643965 34.0 31.0 34.0 21.0 34.0 2 28.316657058659906 34.0 23.0 34.0 12.0 34.0 3 27.17114211652967 32.0 23.0 34.0 11.0 34.0 4 29.609448634789583 34.0 27.0 34.0 12.0 34.0 5 29.173198095598995 34.0 27.0 34.0 11.0 34.0 6 31.624211370773654 37.0 27.0 38.0 11.0 38.0 7 32.63917567333314 37.0 31.0 38.0 12.0 38.0 8 31.820130050754464 37.0 28.0 38.0 11.0 38.0 9 33.20778288861028 37.0 34.0 38.0 21.0 38.0 10-11 33.001015895540135 37.0 34.0 38.0 11.5 38.0 12-13 31.93933047646307 37.0 29.5 38.0 16.0 38.0 14-15 32.03575186348299 37.0 29.0 38.0 11.5 38.0 16-17 31.677991348762582 36.5 29.0 38.0 16.0 38.0 18-19 32.26280250103807 37.0 31.0 38.0 11.5 38.0 20-21 31.141584393909465 36.0 27.0 38.0 16.0 38.0 22-23 31.12895423229338 35.5 28.5 38.0 16.0 38.0 24-25 32.378453339353456 37.0 30.5 38.0 16.5 38.0 26-27 30.93787718145426 36.5 25.5 38.0 11.0 38.0 28-29 33.09510112595089 37.0 33.5 38.0 21.0 38.0 30-31 33.52632257908465 38.0 34.0 38.0 21.0 38.0 32-33 33.60816667136989 38.0 34.0 38.0 21.0 38.0 34-35 33.6728937300701 38.0 34.0 38.0 21.0 38.0 36-37 31.50848595282536 36.5 27.5 38.0 11.0 38.0 38-39 29.66351685298137 34.5 23.0 38.0 11.0 38.0 40-41 31.000076595298662 35.5 26.5 38.0 11.0 38.0 42-43 32.050526693461585 36.5 30.0 38.0 16.0 38.0 44-45 33.70980460136178 37.5 34.0 38.0 21.0 38.0 46-47 32.23436145724571 37.5 29.5 38.0 16.0 38.0 48-49 31.6922541996396 36.5 29.0 38.0 16.0 38.0 50-51 29.439985567833197 34.5 23.0 38.0 11.0 38.0 52-53 32.90715641969386 37.0 32.5 38.0 21.0 38.0 54-55 31.941646476414697 37.0 29.5 38.0 16.0 38.0 56-57 32.373660086189865 37.0 30.0 38.0 16.0 38.0 58-59 33.49179019338297 37.5 34.0 38.0 21.0 38.0 60-61 33.91662601740729 38.0 34.5 38.0 21.0 38.0 62-63 33.79680879797789 38.0 34.5 38.0 21.0 38.0 64-65 33.50973768125874 38.0 34.5 38.0 16.0 38.0 66-67 31.38367794498845 37.0 27.0 38.0 11.0 38.0 68-69 31.48981282527806 37.0 28.0 38.0 11.0 38.0 70-71 31.08619188331714 36.5 26.0 38.0 11.0 38.0 72-73 29.829053403048494 34.5 23.5 38.0 11.0 38.0 74-75 32.017379070133074 36.5 30.0 38.0 16.0 38.0 76 32.36392845192839 37.0 31.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 1.0 5 0.0 6 0.0 7 0.0 8 2.0 9 2.0 10 3.0 11 18.0 12 51.0 13 327.0 14 785.0 15 1472.0 16 2343.0 17 3728.0 18 4835.0 19 5436.0 20 4902.0 21 4079.0 22 3489.0 23 3277.0 24 3241.0 25 3542.0 26 4084.0 27 4945.0 28 5793.0 29 7014.0 30 8706.0 31 11339.0 32 14879.0 33 19511.0 34 26982.0 35 36520.0 36 42211.0 37 24536.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.23626021438621 17.742293101988658 10.985781493769577 29.035665189855557 2 22.117497188146274 17.496381879971135 35.69381230926763 24.692308622614963 3 21.347281852814902 17.158291507931708 34.71125355263954 26.783173086613854 4 15.140935917696005 18.413584029412714 32.13145418776405 34.31402586512723 5 14.97075268990595 29.445651604268374 37.91668850304567 17.666907202780006 6 28.84659574210766 31.732222835880464 16.977549514829253 22.443631907182624 7 28.38984588219643 26.684189520956874 19.9268716464361 24.999092950410592 8 24.620644058503864 30.645590440714045 18.1796558786061 26.554109622175996 9 23.81879605889088 16.09985003144502 19.88010578427104 40.201248125393064 10-11 25.609662684894396 23.182501703306226 26.218015134228594 24.98982047757078 12-13 25.367324682968917 20.12651006779053 27.578630361206802 26.92753488803375 14-15 23.904051602499496 22.342672848216086 23.6244708728079 30.128804676476516 16-17 24.7468150298339 23.068053539751652 25.978672794710526 26.206458635703918 18-19 22.864831631676022 23.066611568581997 27.212473668826913 26.856083130915064 20-21 24.159742631496194 22.747118512874472 27.307507790799402 25.785631064829932 22-23 24.573512307317063 22.304958606050953 27.594151832239106 25.52737725439288 24-25 23.602997794790546 24.352849638579475 23.84186189019105 28.202290676438928 26-27 23.196702311002714 23.608308724967497 27.085999939528932 26.10898902450086 28-29 23.825486445245808 24.372957816887357 25.663627622712404 26.137928115154434 30-31 23.52157392382354 24.32022738038844 25.840732938911675 26.31746575687634 32-33 23.598966333264798 24.255691415808972 25.72657015347774 26.41877209744849 34-35 23.483084688432925 24.163003009540628 26.16163631928948 26.192275982736966 36-37 23.885471008942034 22.2788882527959 29.554672192612543 24.28096854564953 38-39 23.70535516305772 21.15557508637685 32.19790276607497 22.94116698449047 40-41 23.62774702569333 22.47874343354526 25.763079490890618 28.130430049870785 42-43 21.701918367100113 22.56404467656657 26.99118522714216 28.74285172919115 44-45 21.70499350916377 22.06299739560236 29.224889333258076 27.007119761975794 46-47 22.46917412662545 21.320196011634916 30.240499261227228 25.9701306005124 48-49 22.437530740761645 21.944469081849043 30.321679393006022 25.29632078438329 50-51 22.916423097235604 21.146798792164386 32.27352074405253 23.66325736654747 52-53 19.798461550866385 23.76391901371542 29.13962151571105 27.297997919707147 54-55 21.371942308273784 22.849713254784966 28.962375399377123 26.815969037564123 56-57 21.198774415932593 23.2425567941301 28.19750448507327 27.36116430486404 58-59 19.66279904209771 23.546213947637902 28.765692906846418 28.02529410341797 60-61 20.032333299064874 23.189264699657112 28.58936911766781 28.189032883610203 62-63 20.179203160748663 23.95133898424665 27.761371539151558 28.108086315853132 64-65 20.846200362830075 23.791171134851844 26.49264261237654 28.869985889941546 66-67 19.89828212498841 23.553755659392273 23.657973141320518 32.889989074298796 68-69 20.349871157405726 23.926412530194334 23.659250656310867 32.06446565608908 70-71 20.28749163448126 24.174131800259634 23.231146338120155 32.30723022713895 72-73 19.7589147130561 24.079501703319963 21.918401902880525 34.24318168074341 74-75 21.07963192533688 25.766234289803364 23.505981717211423 29.648152067648333 76 21.836360337841924 25.235743514281683 23.95855590719426 28.969340240682133 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 2.5 6 1.5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 2.0 15 7.0 16 13.5 17 17.0 18 20.0 19 28.0 20 48.5 21 64.0 22 90.5 23 158.0 24 261.0 25 323.0 26 403.0 27 640.5 28 942.0 29 1086.0 30 1318.5 31 1803.0 32 2418.5 33 2782.0 34 3208.5 35 4210.0 36 5456.5 37 6128.0 38 6741.5 39 8230.5 40 9980.5 41 11351.5 42 11848.0 43 12288.0 44 13209.5 45 13930.5 46 14170.0 47 14181.0 48 13940.0 49 13124.5 50 12561.0 51 12036.5 52 10856.0 53 9674.0 54 9148.0 55 8546.5 56 7492.0 57 6655.5 58 6272.0 59 6020.0 60 5517.5 61 5057.5 62 4848.0 63 4662.5 64 4311.0 65 3985.5 66 3727.5 67 3629.0 68 3357.0 69 2964.5 70 2741.5 71 2639.0 72 2468.0 73 2148.5 74 1850.0 75 1700.0 76 1579.5 77 1281.0 78 946.5 79 790.0 80 701.5 81 513.0 82 347.5 83 282.0 84 233.5 85 137.5 86 88.0 87 86.0 88 64.5 89 37.5 90 20.0 91 7.0 92 6.0 93 4.5 94 4.5 95 3.5 96 1.0 97 0.5 98 1.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 8.062663016967875E-4 4 4.0313315084839374E-4 5 0.0 6 0.0 7 0.0 8 0.0020156657542419686 9 0.0020156657542419686 10-11 0.004031331508483937 12-13 0.005442297536453315 14-15 0.002821932055938756 16-17 0.0068532635644226935 18-19 0.005845430687301709 20-21 0.00322506520678715 22-23 0.005442297536453315 24-25 0.00322506520678715 26-27 0.0018140991788177716 28-29 0.003023498631362953 30-31 0.005845430687301709 32-33 0.00322506520678715 34-35 0.005039164385604921 36-37 0.006046997262725906 38-39 0.0064501304135743 40-41 0.0064501304135743 42-43 0.003023498631362953 44-45 0.006046997262725906 46-47 0.004232898083908134 48-49 0.006046997262725906 50-51 0.004031331508483937 52-53 0.006046997262725906 54-55 0.005845430687301709 56-57 0.0048375978101807245 58-59 0.006046997262725906 60-61 0.0062485638381501035 62-63 0.005845430687301709 64-65 0.002821932055938756 66-67 0.007256396715271086 68-69 0.0322506520678715 70-71 0.006046997262725906 72-73 0.0048375978101807245 74-75 0.0038297649330597404 76 0.0048375978101807245 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 248057.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 95.83671605686355 #Duplication Level Percentage of deduplicated Percentage of total 1 97.25106106289486 93.20222325313354 2 1.9808467270914107 3.79675690672854 3 0.4241713979908491 1.219535814860756 4 0.15249023386006666 0.584566529755677 5 0.08000828214005094 0.3833865508826745 6 0.048790297227790054 0.28055411170498157 7 0.02438636146380463 0.16359761594866784 8 0.010160445111169729 0.07789949545044166 9 0.01136019685062972 0.09798515639314886 >10 0.01672499536936848 0.19349456514157523 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004434464659332331 0.0 2 0.0 0.0 0.0 0.005643864111877512 0.0 3 0.0 0.0 0.0 0.006046997262725905 0.0 4 0.0 0.0 0.0 0.022575456447510047 0.0 5 0.0 0.0 0.0 0.023381722749206836 0.0 6 0.0 0.0 0.0 0.023381722749206836 0.0 7 0.0 0.0 0.0 0.024591122201752018 0.0 8 0.0 0.0 0.0 0.02499425535260041 0.0 9 0.0 0.0 0.0 0.028622453710235952 0.0 10 0.0 0.0 0.0 0.029831853162781134 0.0 11 0.0 0.0 0.0 0.0322506520678715 0.0 12 0.0 0.0 0.0 0.032653785218719894 0.0 13 0.0 0.0 0.0 0.03305691836956828 0.0 14 0.0 0.0 0.0 0.03305691836956828 0.0 15 0.0 0.0 0.0 0.034266317822113465 0.0 16 0.0 0.0 0.0 0.034266317822113465 0.0 17 0.0 0.0 0.0 0.03628198357635543 0.0 18 0.0 0.0 0.0 0.037088249878052225 0.0 19 0.0 0.0 0.0 0.03950704878314258 0.0 20 0.0 0.0 0.0 0.041925847688232945 0.0 21 0.0 0.0 0.0 0.04394151344247491 0.0 22 0.0 0.0 0.0 0.049182244403504036 0.0 23 0.0 0.0 0.0 0.05079477700689761 0.0 24 0.0 0.0 0.0 0.055632374817078334 0.0 25 0.0 0.0 0.0 0.060469972627259054 0.0 26 0.0 0.0 0.0 0.0765952986611948 0.0 27 0.0 0.0 0.0 0.14593420060711854 0.0 28 0.0 0.0 0.0 0.19310077925638058 0.0 29 0.0 0.0 0.0 0.2237388987208585 0.0 30 0.0 0.0 0.0 0.2829994718955724 0.0 31 0.0 0.0 0.0 0.31202505875665676 0.0 32 0.0 0.0 0.0 0.36846369987543187 0.0 33 0.0 0.0 0.0 0.41764594427893587 0.0 34 0.0 0.0 0.0 0.48375978101807243 0.0 35 0.0 0.0 0.0 0.6180031202505876 0.0 36 0.0 0.0 0.0 0.7542621252373446 0.0 37 0.0 4.031331508483937E-4 0.0 1.1694892706111901 0.0 38 0.0 4.031331508483937E-4 0.0 1.5919728127003068 0.0 39 0.0 4.031331508483937E-4 0.0 2.149102827172787 0.0 40 0.0 4.031331508483937E-4 0.0 2.786859471814946 4.031331508483937E-4 41 0.0 4.031331508483937E-4 0.0 3.6745586699831088 4.031331508483937E-4 42 0.0 4.031331508483937E-4 4.031331508483937E-4 4.63038737064465 4.031331508483937E-4 43 0.0 4.031331508483937E-4 4.031331508483937E-4 5.667245834626719 4.031331508483937E-4 44 0.0 4.031331508483937E-4 4.031331508483937E-4 6.537610307308401 4.031331508483937E-4 45 0.0 4.031331508483937E-4 4.031331508483937E-4 7.124975308094511 4.031331508483937E-4 46 0.0 4.031331508483937E-4 4.031331508483937E-4 7.808285998782538 4.031331508483937E-4 47 0.0 4.031331508483937E-4 4.031331508483937E-4 8.570207653886001 4.031331508483937E-4 48 0.0 4.031331508483937E-4 4.031331508483937E-4 9.083799288066855 4.031331508483937E-4 49 0.0 4.031331508483937E-4 4.031331508483937E-4 9.519183090983121 4.031331508483937E-4 50 0.0 4.031331508483937E-4 4.031331508483937E-4 10.22224730606272 4.031331508483937E-4 51 0.0 4.031331508483937E-4 4.031331508483937E-4 11.079308384766405 4.031331508483937E-4 52 0.0 4.031331508483937E-4 4.031331508483937E-4 11.950479123749783 4.031331508483937E-4 53 0.0 4.031331508483937E-4 4.031331508483937E-4 13.110293198740612 4.031331508483937E-4 54 0.0 4.031331508483937E-4 4.031331508483937E-4 14.06450936679876 4.031331508483937E-4 55 0.0 4.031331508483937E-4 4.031331508483937E-4 14.643408571417053 4.031331508483937E-4 56 0.0 4.031331508483937E-4 4.031331508483937E-4 15.262621091120186 4.031331508483937E-4 57 0.0 4.031331508483937E-4 4.031331508483937E-4 15.750412203646743 4.031331508483937E-4 58 0.0 4.031331508483937E-4 4.031331508483937E-4 16.19063360437319 4.031331508483937E-4 59 0.0 4.031331508483937E-4 4.031331508483937E-4 16.698178241291316 4.031331508483937E-4 60 0.0 4.031331508483937E-4 4.031331508483937E-4 17.015444031009 4.031331508483937E-4 61 0.0 4.031331508483937E-4 4.031331508483937E-4 17.348028880458926 4.031331508483937E-4 62 0.0 4.031331508483937E-4 4.031331508483937E-4 17.599987099739174 4.031331508483937E-4 63 0.0 4.031331508483937E-4 4.031331508483937E-4 17.976513462631573 4.031331508483937E-4 64 0.0 4.031331508483937E-4 4.031331508483937E-4 18.37359961621724 4.031331508483937E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTTGAC 30 5.8727746E-4 46.662907 16 AGTCGCT 30 5.8727746E-4 46.662907 24 TCTCGGT 160 0.0 39.371826 43 CGACGAT 45 9.185407E-5 38.885754 22 TCGATCT 55 6.681692E-6 38.17874 39 CAACTCG 65 4.8526636E-7 37.689266 69 GATCTCG 115 1.8189894E-12 36.518795 41 AGATCTC 120 1.8189894E-12 34.99718 40 CGCCGTA 140 0.0 34.997177 53 GCCGTAT 100 3.237801E-10 34.997177 54 CTCGGTG 165 0.0 33.936657 44 ATCTCGG 130 5.456968E-12 32.305088 42 AGGACGG 65 2.0985732E-5 32.305088 5 GATCTCT 65 2.0985732E-5 32.305088 41 TAGATCT 120 6.548362E-11 32.080746 39 TCTCTCG 55 2.9881526E-4 31.815617 41 GGACGGA 55 2.9881526E-4 31.815617 6 GCCGAAA 155 0.0 31.610355 70 GCTGATA 45 0.004303711 31.108604 54 TCGCTGA 45 0.004303711 31.108604 52 >>END_MODULE