##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779767_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 184406 Sequences flagged as poor quality 0 Sequence length 76 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.94138477056061 34.0 23.0 34.0 12.0 34.0 2 27.6050616574298 33.0 23.0 34.0 12.0 34.0 3 26.568506447729465 32.0 21.0 34.0 11.0 34.0 4 28.733229938288343 33.0 23.0 34.0 12.0 34.0 5 28.399184408316433 34.0 23.0 34.0 11.0 34.0 6 30.539667906684166 36.0 26.0 38.0 11.0 38.0 7 31.58133141004089 37.0 27.0 38.0 12.0 38.0 8 30.763576022472154 37.0 26.0 38.0 11.0 38.0 9 32.255517716343284 37.0 31.0 38.0 12.0 38.0 10-11 31.899780918191382 37.0 28.0 38.0 11.0 38.0 12-13 31.07900231012006 36.0 27.0 38.0 11.0 38.0 14-15 30.96516653471145 36.5 26.5 38.0 11.0 38.0 16-17 30.68579655759574 35.5 26.5 38.0 11.0 38.0 18-19 31.255327917746712 36.5 26.5 38.0 11.5 38.0 20-21 30.14191512206761 35.5 24.5 38.0 11.0 38.0 22-23 30.14714271769899 35.5 26.0 38.0 11.0 38.0 24-25 31.19201381733783 36.5 27.0 38.0 11.0 38.0 26-27 29.86187271563832 35.0 24.0 38.0 11.0 38.0 28-29 31.820119735800354 37.0 29.0 38.0 11.0 38.0 30-31 32.23938483563442 37.0 31.0 38.0 11.0 38.0 32-33 32.36024587052482 37.0 31.0 38.0 11.0 38.0 34-35 32.37366191989415 37.5 31.0 38.0 11.0 38.0 36-37 30.490724271444527 36.0 25.0 38.0 11.0 38.0 38-39 28.8900578072297 34.0 22.0 37.5 11.0 38.0 40-41 29.898175764346064 35.0 24.5 37.5 11.0 38.0 42-43 30.88318167521664 36.5 25.5 38.0 11.0 38.0 44-45 32.466652386581785 37.0 31.0 38.0 11.0 38.0 46-47 31.128729542422697 36.5 27.5 38.0 11.0 38.0 48-49 30.55877791395074 35.5 25.0 38.0 11.0 38.0 50-51 28.485713588494953 34.0 21.0 37.5 11.0 38.0 52-53 31.5835384965782 36.5 28.5 38.0 11.0 38.0 54-55 30.735531924123947 36.5 26.0 38.0 11.0 38.0 56-57 31.135977137403337 36.5 27.0 38.0 11.0 38.0 58-59 32.12651161025129 37.0 31.0 38.0 11.0 38.0 60-61 32.62202422914656 38.0 32.0 38.0 11.0 38.0 62-63 32.50385020010195 38.0 32.0 38.0 11.0 38.0 64-65 32.2098575968244 37.5 30.0 38.0 11.0 38.0 66-67 30.30096634599742 36.0 24.0 38.0 11.0 38.0 68-69 30.397614502781906 36.0 24.5 38.0 11.0 38.0 70-71 30.01473650531978 35.0 24.0 38.0 11.0 38.0 72-73 28.872680390009002 34.0 22.0 37.5 11.0 38.0 74-75 30.763134062882983 36.0 25.5 38.0 11.0 38.0 76 30.959084845395488 36.0 25.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 0.0 5 2.0 6 0.0 7 2.0 8 2.0 9 0.0 10 2.0 11 13.0 12 59.0 13 349.0 14 996.0 15 1777.0 16 2754.0 17 4418.0 18 5838.0 19 6042.0 20 5496.0 21 4173.0 22 3427.0 23 2917.0 24 2793.0 25 2828.0 26 3012.0 27 3542.0 28 4220.0 29 5117.0 30 6140.0 31 7763.0 32 10097.0 33 13459.0 34 18321.0 35 24528.0 36 28275.0 37 16040.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.71833888268277 17.353014543995315 11.07339240588701 31.8552541674349 2 20.7395637885969 16.909970391418934 38.183681658948196 24.166784161035977 3 19.93709498115561 16.51310973129796 36.024511265963504 27.52528402158293 4 14.73658523358911 18.047232992597813 31.92267020959301 35.29351156422006 5 14.607442274112556 27.99312386798694 39.07681962625945 18.32261423164105 6 27.985531924123947 31.95611856447187 17.122544819582878 22.935804691821307 7 28.17641508410789 24.426537097491405 19.84967951151264 27.547368306888064 8 23.72004490214261 31.06436516070954 18.53135286684996 26.684237070297883 9 23.044176184123472 15.219796310155207 19.772991030271477 41.96303647544985 10-11 25.275154354882005 22.35047845268213 26.84703885377434 25.527328338661526 12-13 24.372605325025017 18.367512954632346 28.87520438627175 28.384677334070886 14-15 24.324903267091287 21.344960262907435 23.26524746542154 31.064889004579733 16-17 25.77802362881555 21.439204744201938 25.48923904584489 27.29353258113762 18-19 22.836573659806394 21.2999267876027 27.31798584560319 28.54551370698772 20-21 24.827275783902213 21.344320437314938 26.671113569561495 27.157290209221358 22-23 26.088418403869934 20.38113625024404 26.382351027137247 27.14809431874878 24-25 23.49510298376338 23.673250252171933 22.99401295024892 29.837633813815767 26-27 24.064066723969166 22.84254737624152 26.50927459917625 26.584111300613067 28-29 23.859596794967395 23.598747271519407 25.27230575251834 27.269350180994863 30-31 23.724341766316876 23.011469942243554 25.637896906098323 27.62629138534125 32-33 23.825160319418647 22.97238303122331 25.463468864816498 27.738987784541546 34-35 23.98413223499043 23.105602524959462 25.574976003123663 27.335289236926446 36-37 25.045486714625437 20.52393102831158 29.561619245693336 24.868963011369644 38-39 24.6157684089504 19.517446337733332 32.94874019762031 22.918045055695956 40-41 24.145383157398093 22.21285226591755 25.248175796047086 28.39358878063727 42-43 21.42202506521185 22.592584558484592 26.79108888876838 29.194301487535178 44-45 21.130125192859914 21.125244379607963 29.258306195107796 28.486324232424327 46-47 23.5636251230365 20.297565300859834 29.37311716870982 26.76569240739385 48-49 23.31971224894317 20.76786038704849 29.839665284673433 26.07276207933491 50-51 25.6026399561815 19.62911544114058 30.920513891223827 23.84773071145409 52-53 19.946473167438114 22.55692310195316 29.30011090412623 28.196492826482494 54-55 22.32366562903348 21.370272351594956 28.35856915084005 27.947492868531516 56-57 22.41007174737116 22.120479183500816 27.413949250801263 28.055499818326762 58-59 20.17294582766157 22.991653696181523 28.057464220442206 28.7779362557147 60-61 19.942676938178405 22.30501617464824 28.017798892043377 29.734507995129984 62-63 20.07142314825862 22.94922828291593 27.594173346204325 29.385175222621125 64-65 20.816985045892704 23.461814829376753 26.439349774264837 29.281850350465703 66-67 19.575256177685223 24.94664942093946 22.662946361992155 32.81514803938317 68-69 20.150747499294813 24.925412806214332 22.875485494825003 32.04835419966585 70-71 19.835947774448528 25.720948520140464 21.804303320362813 32.6388003850482 72-73 19.23908121402095 25.654639077417833 21.104907657724837 34.00137205083638 74-75 21.03597691923903 25.10303911147747 23.14149981561422 30.71948415366928 76 22.21945042489845 24.286729176721963 23.525328503175214 29.96849189520437 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 0.5 3 1.0 4 2.0 5 1.5 6 1.5 7 1.5 8 1.0 9 1.5 10 2.0 11 1.0 12 0.0 13 1.5 14 1.5 15 1.0 16 2.5 17 3.0 18 8.0 19 19.0 20 33.0 21 41.0 22 60.0 23 96.5 24 152.5 25 191.0 26 236.0 27 371.5 28 565.0 29 668.0 30 822.5 31 1164.0 32 1617.5 33 1884.0 34 2209.5 35 2911.0 36 3778.5 37 4270.0 38 4697.0 39 5672.0 40 6752.5 41 7845.5 42 8406.0 43 8697.5 44 9247.0 45 9748.5 46 9992.0 47 9978.0 48 9690.0 49 9075.0 50 8734.0 51 8421.0 52 7665.0 53 6871.0 54 6520.0 55 6227.0 56 5651.5 57 5179.0 58 4989.0 59 4866.5 60 4615.5 61 4378.5 62 4270.0 63 4319.0 64 4112.5 65 3722.5 66 3458.0 67 3328.0 68 3181.0 69 2872.5 70 2565.0 71 2419.0 72 2286.0 73 1981.5 74 1682.0 75 1554.0 76 1361.5 77 1037.5 78 786.0 79 666.0 80 595.0 81 429.5 82 283.0 83 231.0 84 179.0 85 103.5 86 54.0 87 28.0 88 25.0 89 17.0 90 7.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 5.422817044998537E-4 4 5.422817044998537E-4 5 0.0 6 0.0 7 0.0 8 0.002711408522499268 9 0.004338253635998829 10-11 0.005151676192748609 12-13 0.006778521306248169 14-15 0.0035248310792490483 16-17 0.006778521306248169 18-19 0.00596509874949839 20-21 0.004338253635998829 22-23 0.005422817044998536 24-25 0.004338253635998829 26-27 0.002440267670249341 28-29 0.004609394488248755 30-31 0.00596509874949839 32-33 0.004609394488248755 34-35 0.0037959719314989747 36-37 0.006236239601748316 38-39 0.006507380453998243 40-41 0.0056939578972484625 42-43 0.0037959719314989747 44-45 0.0056939578972484625 46-47 0.005151676192748609 48-49 0.0056939578972484625 50-51 0.004880535340498682 52-53 0.006778521306248169 54-55 0.006507380453998243 56-57 0.004880535340498682 58-59 0.0070496621584980965 60-61 0.006778521306248169 62-63 0.006507380453998243 64-65 0.004609394488248755 66-67 0.006778521306248169 68-69 0.031452338860991504 70-71 0.007320803010748024 72-73 0.0056939578972484625 74-75 0.005422817044998536 76 0.004880535340498682 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 184406.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 91.44272187931145 #Duplication Level Percentage of deduplicated Percentage of total 1 94.00655237333257 85.96215023507577 2 4.260815796366237 7.7924118769218955 3 0.9982510212986391 2.7384837151905015 4 0.348057368524353 1.2730925259206967 5 0.1863965737275211 0.8522305025311143 6 0.078845887842619 0.4325929555991996 7 0.049695644906007135 0.3181013525027122 8 0.0307550410430312 0.22498597315877686 9 0.015860787103725252 0.13053181895216265 >10 0.024769505855300075 0.2754190441471947 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0010845634089997071 0.0 2 0.0 0.0 0.0 0.0010845634089997071 0.0 3 0.0 0.0 0.0 0.0016268451134995607 0.0 4 0.0 0.0 0.0 0.0021691268179994143 0.0 5 0.0 0.0 0.0 0.002711408522499268 0.0 6 0.0 0.0 0.0 0.002711408522499268 0.0 7 0.0 0.0 0.0 0.002711408522499268 0.0 8 0.0 0.0 0.0 0.002711408522499268 0.0 9 0.0 0.0 0.0 0.0070496621584980965 0.0 10 0.0 0.0 0.0 0.009761070680997365 0.0 11 0.0 0.0 0.0 0.009761070680997365 0.0 12 0.0 0.0 0.0 0.010845634089997072 0.0 13 0.0 0.0 0.0 0.011387915794496925 0.0 14 0.0 0.0 0.0 0.01355704261249634 0.0 15 0.0 0.0 0.0 0.014641606021496046 0.0 16 0.0 0.0 0.0 0.014641606021496046 0.0 17 0.0 0.0 0.0 0.0151838877259959 0.0 18 0.0 0.0 0.0 0.0151838877259959 0.0 19 0.0 0.0 0.0 0.018979859657494876 0.0 20 0.0 0.0 0.0 0.020064423066494582 0.0 21 0.0 0.0 0.0 0.020064423066494582 0.0 22 0.0 0.0 0.0 0.026571803520492824 0.0 23 0.0 0.0 0.0 0.03199462056549136 0.0 24 0.0 0.0 0.0 0.034163747383490775 0.0 25 0.0 0.0 0.0 0.03687515590599005 0.0 26 0.0 0.0 0.0 0.040128846132989164 0.0 27 0.0 0.0 0.0 0.08025769226597833 0.0 28 0.0 0.0 0.0 0.1252670737394662 0.0 29 0.0 0.0 0.0 0.16756504669045474 0.0 30 0.0 0.0 0.0 0.21094758305044303 0.0 31 0.0 0.0 0.0 0.2396885133889353 0.0 32 0.0 0.0 0.0 0.2987972191794193 0.0 33 0.0 0.0 0.0 0.36061733349240266 0.0 34 0.0 5.422817044998536E-4 0.0 0.42840254655488436 0.0 35 0.0 5.422817044998536E-4 0.0 0.6062709456308363 0.0 36 0.0 5.422817044998536E-4 0.0 0.7364185547108012 0.0 37 0.0 5.422817044998536E-4 0.0 1.14855265013069 0.0 38 0.0 5.422817044998536E-4 0.0 1.5297766883940869 0.0 39 0.0 5.422817044998536E-4 0.0 2.0015617713089595 0.0 40 0.0 5.422817044998536E-4 0.0 2.5422166306953136 0.0 41 0.0 5.422817044998536E-4 0.0 3.162586900643146 0.0 42 0.0 5.422817044998536E-4 0.0 3.8306779605869656 0.0 43 0.0 5.422817044998536E-4 0.0 4.497142175417285 0.0 44 0.0 5.422817044998536E-4 0.0 5.240068110582085 0.0 45 0.0 5.422817044998536E-4 0.0 5.745474659175949 0.0 46 0.0 5.422817044998536E-4 0.0 6.37289459128228 0.0 47 0.0 5.422817044998536E-4 0.0 7.077318525427589 0.0 48 0.0 5.422817044998536E-4 0.0 7.5539841436829605 0.0 49 0.0 5.422817044998536E-4 0.0 8.03824170580133 0.0 50 0.0 5.422817044998536E-4 0.0 8.678676398815657 0.0 51 0.0 5.422817044998536E-4 0.0 9.36954329034847 0.0 52 0.0 5.422817044998536E-4 0.0 9.975814235979307 0.0 53 0.0 5.422817044998536E-4 0.0 10.742058284437599 0.0 54 0.0 5.422817044998536E-4 0.0 11.51372514994089 0.0 55 0.0 5.422817044998536E-4 0.0 12.029435050920252 0.0 56 0.0 5.422817044998536E-4 0.0 12.569005346897606 0.0 57 0.0 5.422817044998536E-4 0.0 12.988731386180493 0.0 58 0.0 5.422817044998536E-4 0.0 13.382427903647386 0.0 59 0.0 5.422817044998536E-4 0.0 13.81625326724727 0.0 60 0.0 5.422817044998536E-4 0.0 14.098239753587194 0.0 61 0.0 5.422817044998536E-4 0.0 14.41005173367461 0.0 62 0.0 5.422817044998536E-4 0.0 14.616118781384554 0.0 63 0.0 5.422817044998536E-4 0.0 14.945283776015964 0.0 64 0.0 5.422817044998536E-4 0.0 15.228897107469388 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACGAG 15 0.0022231305 69.99051 19 TCTGGAC 15 0.0022231305 69.99051 3 TCGGTTC 20 0.0069391048 52.507122 52 TACCCAG 20 0.006946553 52.492886 5 ACGTGTA 20 0.006946553 52.492886 34 CAGTGTA 40 7.4567834E-7 52.492886 34 GATTCGA 20 0.006946553 52.492886 23 CGACTAA 55 2.2719178E-9 50.90219 22 ATCTCGG 155 0.0 47.412926 42 GCCGTAC 30 5.862578E-4 46.672993 54 CGTGTAT 45 1.6796148E-6 46.660336 35 ACGCTTC 125 0.0 44.793926 15 GACGCTT 95 0.0 44.20453 14 TCTCGGT 200 0.0 43.744072 43 AGATCTC 145 0.0 43.442387 40 GTGTCGC 65 9.958967E-9 43.071083 36 GTAGATC 125 0.0 41.994305 38 CCGACTA 110 0.0 41.358032 21 CGGTGGT 215 0.0 40.692154 46 CGCCGTA 95 3.6379788E-12 40.53181 53 >>END_MODULE