##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779765_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 27251 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.993394737807787 34.0 23.0 34.0 12.0 34.0 2 27.375729331033725 33.0 23.0 34.0 12.0 34.0 3 26.790576492605776 32.0 21.0 34.0 11.0 34.0 4 28.912333492348903 34.0 23.0 34.0 12.0 34.0 5 28.344134160214303 34.0 23.0 34.0 11.0 34.0 6 30.87005981431874 36.0 26.0 38.0 11.0 38.0 7 31.80551172434039 37.0 27.0 38.0 12.0 38.0 8 31.11383068511247 37.0 27.0 38.0 11.0 38.0 9 32.54511761036292 37.0 31.0 38.0 12.0 38.0 10-11 32.127353124655976 37.0 31.0 38.0 11.0 38.0 12-13 31.257109830831897 36.5 28.0 38.0 11.0 38.0 14-15 31.289787530732816 36.5 27.0 38.0 11.0 38.0 16-17 30.978936552787054 36.0 27.0 38.0 11.0 38.0 18-19 31.4132508898756 37.0 27.0 38.0 11.5 38.0 20-21 30.462973835822538 35.5 25.0 38.0 11.0 38.0 22-23 30.49700928406297 35.5 26.0 38.0 11.0 38.0 24-25 31.678910865656306 37.0 29.0 38.0 11.0 38.0 26-27 30.170562548163367 36.0 24.0 38.0 11.0 38.0 28-29 32.243734174892666 37.0 31.0 38.0 11.0 38.0 30-31 32.711955524567905 38.0 33.0 38.0 11.0 38.0 32-33 32.80426406370408 38.0 34.0 38.0 11.0 38.0 34-35 32.859711570217605 38.0 34.0 38.0 11.0 38.0 36-37 30.802319180947485 36.5 25.0 38.0 11.0 38.0 38-39 29.152875123848666 34.0 23.0 37.5 11.0 38.0 40-41 30.329822758797842 35.0 25.0 38.0 11.0 38.0 42-43 31.445084584051962 36.5 28.5 38.0 11.0 38.0 44-45 32.952478808117135 38.0 34.0 38.0 11.0 38.0 46-47 31.532053869582768 37.0 28.5 38.0 11.0 38.0 48-49 30.851069685516126 36.0 27.0 38.0 11.0 38.0 50-51 28.82545594657077 34.0 21.5 38.0 11.0 38.0 52-53 32.02311841767275 37.0 29.5 38.0 11.0 38.0 54-55 31.20795567135151 36.5 27.0 38.0 11.0 38.0 56-57 31.580327327437526 37.0 29.0 38.0 11.0 38.0 58-59 32.68456203442075 37.5 33.0 38.0 11.0 38.0 60-61 33.139976514623314 38.0 34.0 38.0 11.0 38.0 62-63 33.01706359399655 38.0 34.0 38.0 11.0 38.0 64-65 32.75793548860592 38.0 32.5 38.0 11.0 38.0 66-67 30.948845913911416 37.0 25.5 38.0 11.0 38.0 68-69 30.901856812594033 37.0 25.5 38.0 11.0 38.0 70-71 30.285861069318557 36.5 24.0 38.0 11.0 38.0 72-73 29.32505229165902 34.5 22.5 38.0 11.0 38.0 74-75 31.157040108619867 36.5 27.5 38.0 11.0 38.0 76 31.798466111335365 37.0 28.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 10.0 13 68.0 14 174.0 15 315.0 16 465.0 17 710.0 18 802.0 19 763.0 20 764.0 21 552.0 22 415.0 23 356.0 24 336.0 25 320.0 26 353.0 27 401.0 28 457.0 29 615.0 30 706.0 31 970.0 32 1499.0 33 2011.0 34 2964.0 35 4085.0 36 4721.0 37 2417.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.668562621555175 22.923929397086347 12.322483578584272 33.08502440277421 2 17.412205056695168 17.151664159113427 42.09019852482478 23.345932259366627 3 19.276356830941985 17.793842427800815 37.49954130123665 25.430259440020546 4 13.056401599941287 20.461634435433563 33.78224652306338 32.69971744156177 5 13.548126674250485 28.971413893068142 40.479248467946135 17.00121096473524 6 25.323841326923784 34.46845987303218 16.542512201387105 23.66518659865693 7 24.028476019228652 24.964221496458848 22.718432351106383 28.288870133206125 8 20.608418039704965 32.96759751935709 18.24520201093538 28.17878243000257 9 21.65425122013871 14.803126490770982 20.212102308172177 43.33051998091813 10-11 23.213827015522366 23.8688488495835 27.4833951047668 25.433929030127334 12-13 22.347803750321088 19.38460973909214 30.365858133646473 27.901728376940294 14-15 23.037686690396683 22.86338116032439 23.553264100399986 30.545668048878937 16-17 24.784411581226376 22.55146600124766 25.624747715680158 27.0393747018458 18-19 21.026751311878463 22.52761366555356 28.444827712744488 28.000807309823493 20-21 24.364243513999487 22.202854941103077 26.296282705221824 27.13661883967561 22-23 25.101831125463285 21.49278925544017 26.67975487138087 26.72562474771568 24-25 21.540493926828375 24.93853436571135 24.043154379655792 29.477817327804484 26-27 23.39730652086162 23.756926351326555 26.7696598289971 26.076107298814723 28-29 22.257898792704857 24.492679167736963 25.77520091005835 27.47422112949984 30-31 22.04506256651132 24.450478881508936 26.388022457891452 27.116436094088293 32-33 22.002862280283292 24.474331217203037 26.287108729954866 27.235697772558805 34-35 22.265237972918424 24.536714249018384 26.074272503761332 27.12377527430186 36-37 24.51102711827089 21.66892958056585 29.899820190084768 23.920223111078492 38-39 24.07618069061686 20.72034053796191 33.02631096106565 22.177167810355584 40-41 22.978973248688124 23.678030164030677 25.013760962900445 28.329235624380754 42-43 20.27081574988074 24.516531503431064 26.88525191736083 28.327400829327367 44-45 19.883673993614913 23.547759715239806 28.79527356794246 27.773292723202818 46-47 23.808300612821547 22.393673626655904 27.91824153242083 25.87978422810172 48-49 23.604638361894974 22.729441121426735 28.743899306447467 24.922021210230817 50-51 26.80819052511834 20.593739679277824 29.655792447983558 22.942277347620273 52-53 20.094675424755053 24.17159003339327 28.088877472386336 27.64485706946534 54-55 22.74044989174709 22.96246009320759 27.40449891747092 26.892591097574403 56-57 22.933103372353308 22.97163406847455 26.778833804264064 27.316428754908078 58-59 20.889141682874023 24.19177277898059 27.439360023485378 27.479725514660014 60-61 20.219441488385748 23.522072584492314 27.156801585262926 29.101684341859013 62-63 19.77909067557154 24.77156801585263 27.00818318593813 28.4411581226377 64-65 20.766591438689197 25.305957688849745 26.51327498578008 27.41417588668098 66-67 19.329565887490368 26.250412828887015 23.153278778760413 31.266742504862204 68-69 19.158149690820014 26.872052698214645 23.400429365676434 30.569368245288903 70-71 19.80661260137243 26.237569263513265 23.560603280613556 30.39521485450075 72-73 19.463505926388024 26.24857803383362 21.903783347400097 32.38413269237826 74-75 20.747862463762797 26.110968404829183 24.615610436314263 28.525558695093757 76 22.63770136875711 24.644967157168544 25.140361821584527 27.57696965248982 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.5 14 1.0 15 1.0 16 2.0 17 3.0 18 3.5 19 3.0 20 6.0 21 10.0 22 14.5 23 26.0 24 33.5 25 34.0 26 51.0 27 84.5 28 122.5 29 144.0 30 181.0 31 254.5 32 331.5 33 372.0 34 440.5 35 541.0 36 654.5 37 736.0 38 815.0 39 972.5 40 1144.0 41 1307.0 42 1377.0 43 1465.0 44 1588.5 45 1592.5 46 1561.0 47 1560.0 48 1530.5 49 1392.0 50 1282.0 51 1204.5 52 1079.0 53 957.5 54 884.0 55 813.5 56 700.0 57 626.0 58 595.0 59 552.5 60 484.0 61 446.0 62 434.0 63 410.5 64 413.0 65 433.0 66 405.5 67 384.0 68 378.0 69 378.5 70 368.0 71 351.0 72 323.5 73 277.5 74 236.5 75 214.0 76 195.0 77 154.5 78 106.5 79 80.0 80 66.0 81 46.5 82 31.5 83 22.0 84 17.5 85 11.0 86 7.0 87 5.0 88 5.0 89 2.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.001834795053392536 66-67 0.0 68-69 0.005504385160177609 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 27251.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.12483945543283 #Duplication Level Percentage of deduplicated Percentage of total 1 98.41062079281974 96.56526366004917 2 1.3425579655946147 2.634765696671682 3 0.1907255048616305 0.561447286338116 4 0.037397157816005985 0.14678360427140288 5 0.018698578908002993 0.0917397526696268 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.003669590106785072 0.0 18 0.0 0.0 0.0 0.003669590106785072 0.0 19 0.0 0.0 0.0 0.007339180213570144 0.0 20 0.0 0.0 0.0 0.007339180213570144 0.0 21 0.0 0.0 0.0 0.014678360427140288 0.0 22 0.0 0.0 0.0 0.05871344170856115 0.0 23 0.0 0.0 0.0 0.05871344170856115 0.0 24 0.0 0.0 0.0 0.08807016256284173 0.0 25 0.0 0.0 0.0 0.08807016256284173 0.0 26 0.0 0.0 0.0 0.08807016256284173 0.0 27 0.0 0.0 0.0 0.10274852298998202 0.0 28 0.0 0.0 0.0 0.11375729331033724 0.0 29 0.0 0.0 0.0 0.12109647352390739 0.0 30 0.0 0.0 0.0 0.12109647352390739 0.0 31 0.0 0.0 0.0 0.12109647352390739 0.0 32 0.0 0.0 0.0 0.15045319437818797 0.0 33 0.0 0.0 0.0 0.16513155480532823 0.0 34 0.0 0.0 0.0 0.1834795053392536 0.0 35 0.0 0.0 0.0 0.24586253715459983 0.0 36 0.0 0.0 0.0 0.2788888481156655 0.0 37 0.0 0.0 0.0 0.407324501853143 0.0 38 0.0 0.0 0.0 0.49539466441598473 0.0 39 0.0 0.0 0.0 0.6385086785806026 0.0 40 0.0 0.0 0.0 0.7742835125316502 0.0 41 0.0 0.0 0.0 0.8807016256284173 0.0 42 0.0 0.0 0.0 1.1008770320355217 0.0 43 0.0 0.0 0.0 1.27334776705442 0.0 44 0.0 0.0 0.0 1.4421489119665334 0.0 45 0.0 0.0 0.0 1.6072804667718616 0.0 46 0.0 0.0 0.0 1.8054383325382555 0.0 47 0.0 0.0 0.0 2.091666360867491 0.0 48 0.0 0.0 0.0 2.2164324244981835 0.0 49 0.0 0.0 0.0 2.3595464386628016 0.0 50 0.0 0.0 0.0 2.653113647205607 0.0 51 0.0 0.0 0.0 2.8659498733991415 0.0 52 0.0 0.0 0.0 3.108142820446956 0.0 53 0.0 0.0 0.0 3.342996587281201 0.0 54 0.0 0.0 0.0 3.658581336464717 0.0 55 0.0 0.0 0.0 3.860408792337896 0.0 56 0.0 0.0 0.0 4.08792337895857 0.0 57 0.0 0.0 0.0 4.31176837547246 0.0 58 0.0 0.0 0.0 4.454882389637078 0.0 59 0.0 0.0 0.0 4.671388205937397 0.0 60 0.0 0.0 0.0 4.862206891490221 0.0 61 0.0 0.0 0.0 5.034677626509119 0.0 62 0.0 0.0 0.0 5.166782870353382 0.0 63 0.0 0.0 0.0 5.295218524090859 0.0 64 0.0 0.0 0.0 5.416314997614767 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCC 15 0.002201604 70.00001 34 TCTGACT 15 0.002201604 70.00001 11 CATGCAC 15 0.002201604 70.00001 10 CTTTTCA 15 0.002201604 70.00001 40 TTCCGAC 35 3.5361154E-9 70.00001 19 TGAGTAG 15 0.002201604 70.00001 29 GCCATGC 15 0.002201604 70.00001 8 TAGCCAT 15 0.002201604 70.00001 6 TCAATCG 15 0.002201604 70.00001 47 CTCGGTT 15 0.002201604 70.00001 44 GTGTACA 15 0.002201604 70.00001 36 GCGTGTA 15 0.002201604 70.00001 34 TTCGCCG 15 0.002201604 70.00001 51 CGTCAAT 15 0.002201604 70.00001 70 GCACTAC 15 0.002201604 70.00001 13 TCAACCG 15 0.002201604 70.00001 32 CGTATCC 20 7.790757E-5 70.0 56 CGTGTAG 20 7.790757E-5 70.0 35 CGATCTC 20 7.790757E-5 70.0 40 CGCTTCC 45 3.619789E-10 62.222225 16 >>END_MODULE