##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779764_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15584 Sequences flagged as poor quality 0 Sequence length 76 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.31038244353183 32.0 23.0 34.0 12.0 34.0 2 26.316927618069816 31.0 21.0 34.0 12.0 34.0 3 25.61729979466119 31.0 21.0 34.0 11.0 34.0 4 27.365118069815196 32.0 23.0 34.0 12.0 34.0 5 26.88501026694045 32.0 21.0 34.0 11.0 34.0 6 28.92113706365503 34.0 21.0 38.0 11.0 38.0 7 29.900154004106778 34.0 24.0 38.0 12.0 38.0 8 29.201296201232033 34.0 21.0 38.0 11.0 38.0 9 30.805056468172484 36.0 26.0 38.0 12.0 38.0 10-11 30.203349589322382 36.0 24.0 38.0 11.0 38.0 12-13 29.65397202258727 35.5 23.5 38.0 11.0 38.0 14-15 29.30008341889117 34.5 22.0 38.0 11.0 38.0 16-17 29.19728567761807 35.0 23.5 38.0 11.0 38.0 18-19 29.64659265913758 34.5 23.0 38.0 11.0 38.0 20-21 28.662955595482543 33.0 22.0 37.5 11.0 38.0 22-23 28.653009496919918 33.5 22.5 37.5 11.0 38.0 24-25 29.582937628336758 35.0 22.5 38.0 11.0 38.0 26-27 28.287698921971252 33.0 21.5 38.0 11.0 38.0 28-29 30.00506930184805 36.5 23.0 38.0 11.0 38.0 30-31 30.464931981519506 37.0 24.0 38.0 11.0 38.0 32-33 30.693435574948666 37.0 25.5 38.0 11.0 38.0 34-35 30.738513860369608 37.0 26.0 38.0 11.0 38.0 36-37 28.873716632443532 34.0 22.0 38.0 11.0 38.0 38-39 27.759914014373717 32.0 21.0 37.0 11.0 38.0 40-41 28.395309291581107 34.0 21.0 37.0 11.0 38.0 42-43 29.335632700205338 35.0 23.0 38.0 11.0 38.0 44-45 30.73078157084189 37.0 26.0 38.0 11.0 38.0 46-47 29.503850102669404 35.5 23.5 38.0 11.0 38.0 48-49 28.79260780287474 35.0 22.0 38.0 11.0 38.0 50-51 27.034554671457904 31.0 16.0 37.0 11.0 38.0 52-53 29.776694045174537 35.5 23.5 38.0 11.0 38.0 54-55 29.000609599589325 35.0 22.0 38.0 11.0 38.0 56-57 29.46534907597536 35.5 23.0 38.0 11.0 38.0 58-59 30.324082392197127 37.0 23.5 38.0 11.0 38.0 60-61 30.86579183778234 37.0 25.0 38.0 11.0 38.0 62-63 30.712846509240244 37.0 24.5 38.0 11.0 38.0 64-65 30.476514373716633 37.0 24.0 38.0 11.0 38.0 66-67 29.004074691991786 34.5 21.5 38.0 11.0 38.0 68-69 28.80200847022587 34.0 21.0 38.0 11.0 38.0 70-71 28.356038244353183 34.0 21.0 38.0 11.0 38.0 72-73 27.406121663244356 32.0 20.0 37.0 11.0 38.0 74-75 28.78365631416838 35.0 22.0 37.5 11.0 38.0 76 29.254299281314168 36.0 22.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 15.0 13 43.0 14 151.0 15 266.0 16 379.0 17 575.0 18 735.0 19 754.0 20 726.0 21 509.0 22 367.0 23 318.0 24 256.0 25 217.0 26 209.0 27 244.0 28 312.0 29 337.0 30 421.0 31 575.0 32 817.0 33 1075.0 34 1471.0 35 1927.0 36 1934.0 37 950.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.63603696098563 18.069815195071868 12.403747433264888 36.89040041067762 2 17.46021560574949 14.803644763860369 45.110369609856264 22.62577002053388 3 17.466632443531825 17.20354209445585 40.734086242299796 24.595739219712527 4 14.046457905544148 20.546714579055443 29.119609856262834 36.287217659137575 5 14.104209445585218 24.69199178644764 41.061344969199176 20.142453798767967 6 24.25564681724846 34.715092402464066 15.7661704312115 25.263090349075974 7 23.607546201232033 23.177618069815196 20.16170431211499 33.053131416837786 8 20.60446611909651 32.7258726899384 17.967145790554415 28.70251540041068 9 20.829055441478438 14.983316221765913 19.443018480492814 44.744609856262834 10-11 22.46214065708419 22.468557494866527 28.28221252566735 26.78708932238193 12-13 21.631160164271044 17.161832648870636 31.285292607802873 29.921714579055443 14-15 23.96368069815195 21.335985626283367 23.382956878850102 31.31737679671458 16-17 27.02130390143737 19.78952772073922 23.95084702258727 29.238321355236142 18-19 21.522073921971252 19.529645790554415 28.55813655030801 30.390143737166326 20-21 26.617043121149898 19.542479466119097 25.118711498973305 28.7217659137577 22-23 27.91003593429158 18.413116016427107 24.26527207392197 29.411575975359344 24-25 21.6472022587269 23.816093429158112 21.974460985626283 32.562243326488705 26-27 25.978567761806982 22.25680184804928 24.752951745379878 27.011678644763858 28-29 23.73588295687885 22.738064681724847 24.271688911704313 29.25436344969199 30-31 22.757315195071868 22.661062628336754 25.413886036960985 29.16773613963039 32-33 22.484599589322382 22.487808008213552 25.66093429158111 29.36665811088296 34-35 23.28349589322382 22.26642710472279 25.240631416837783 29.209445585215605 36-37 26.969969199178646 18.547869609856264 29.700333675564682 24.781827515400412 38-39 25.94969199178645 17.41208932238193 33.95469712525667 22.68352156057495 40-41 24.043891170431213 23.36370636550308 24.043891170431213 28.548511293634498 42-43 19.975616016427107 23.64283880903491 26.479081108829565 29.90246406570842 44-45 20.437628336755647 20.47292094455852 29.16452772073922 29.924922997946613 46-47 26.41491273100616 19.04838295687885 27.01488706365503 27.521817248459957 48-49 25.8791067761807 19.475102669404517 28.73459958932238 25.911190965092402 50-51 31.824306981519506 17.652720739219713 27.02451232032854 23.498459958932237 52-53 19.96278234086242 21.246149897330596 28.664014373716633 30.127053388090346 54-55 25.503721765913756 20.30929158110883 25.81172997946612 28.375256673511295 56-57 25.019250513347025 20.367043121149898 25.176463039014372 29.437243326488705 58-59 20.9958932238193 22.718814168377826 26.902592402464066 29.382700205338807 60-61 20.52104722792608 20.665426078028748 27.399897330595486 31.41362936344969 62-63 20.190580082135522 22.866401437371664 26.91221765913758 30.030800821355236 64-65 20.16491273100616 24.066350102669404 26.225616016427107 29.543121149897328 66-67 19.305056468172484 27.23305954825462 20.97664271047228 32.48524127310062 68-69 19.335066268733353 28.201919065498537 21.218831231346876 31.24418343442123 70-71 19.6291067761807 28.805184804928132 20.501796714579054 31.063911704312115 72-73 19.366016427104725 29.190195071868587 19.654774127310063 31.789014373716633 74-75 21.021560574948666 25.529389117043124 23.135908624229977 30.313141683778234 76 23.27387063655031 22.08033880903491 24.58290554414784 30.062885010266942 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.5 16 0.5 17 0.0 18 0.0 19 1.0 20 4.0 21 6.0 22 7.5 23 9.5 24 20.0 25 30.0 26 32.0 27 45.5 28 68.5 29 80.0 30 94.5 31 129.0 32 159.5 33 170.0 34 216.0 35 272.0 36 319.5 37 357.0 38 390.5 39 469.0 40 558.5 41 648.5 42 694.0 43 718.5 44 749.0 45 742.0 46 729.0 47 732.5 48 718.0 49 659.5 50 619.0 51 613.5 52 581.5 53 537.0 54 519.0 55 481.0 56 422.5 57 387.5 58 373.0 59 339.5 60 331.5 61 353.0 62 349.0 63 357.0 64 360.0 65 353.0 66 352.0 67 353.0 68 333.5 69 328.0 70 325.5 71 309.0 72 295.0 73 258.0 74 211.0 75 187.0 76 174.0 77 140.0 78 99.0 79 79.0 80 71.0 81 48.0 82 26.5 83 20.0 84 16.0 85 9.0 86 5.0 87 4.0 88 4.5 89 2.5 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.02245893223819302 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 15584.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.14014373716633 #Duplication Level Percentage of deduplicated Percentage of total 1 99.2168284789644 98.36370636550308 2 0.7119741100323626 1.4117043121149897 3 0.05825242718446602 0.1732546201232033 4 0.012944983818770225 0.051334702258726904 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006416837782340862 0.0 2 0.0 0.0 0.0 0.006416837782340862 0.0 3 0.0 0.0 0.0 0.006416837782340862 0.0 4 0.0 0.0 0.0 0.006416837782340862 0.0 5 0.0 0.0 0.0 0.006416837782340862 0.0 6 0.0 0.0 0.0 0.006416837782340862 0.0 7 0.0 0.0 0.0 0.006416837782340862 0.0 8 0.0 0.0 0.0 0.006416837782340862 0.0 9 0.0 0.0 0.0 0.006416837782340862 0.0 10 0.0 0.0 0.0 0.006416837782340862 0.0 11 0.0 0.0 0.0 0.006416837782340862 0.0 12 0.0 0.0 0.0 0.006416837782340862 0.0 13 0.0 0.0 0.0 0.006416837782340862 0.0 14 0.0 0.0 0.0 0.012833675564681724 0.0 15 0.0 0.0 0.0 0.012833675564681724 0.0 16 0.0 0.0 0.0 0.012833675564681724 0.0 17 0.0 0.0 0.0 0.012833675564681724 0.0 18 0.0 0.0 0.0 0.012833675564681724 0.0 19 0.0 0.0 0.0 0.019250513347022588 0.0 20 0.0 0.0 0.0 0.03208418891170431 0.0 21 0.0 0.0 0.0 0.038501026694045176 0.0 22 0.0 0.0 0.0 0.1540041067761807 0.0 23 0.0 0.0 0.0 0.1540041067761807 0.0 24 0.0 0.0 0.0 0.16042094455852157 0.0 25 0.0 0.0 0.0 0.1668377823408624 0.0 26 0.0 0.0 0.0 0.1668377823408624 0.0 27 0.0 0.0 0.0 0.1668377823408624 0.0 28 0.0 0.0 0.0 0.1668377823408624 0.006416837782340862 29 0.0 0.0 0.0 0.1668377823408624 0.006416837782340862 30 0.0 0.0 0.0 0.17967145790554415 0.006416837782340862 31 0.0 0.0 0.0 0.186088295687885 0.006416837782340862 32 0.0 0.0 0.0 0.186088295687885 0.006416837782340862 33 0.0 0.0 0.0 0.19892197125256675 0.006416837782340862 34 0.0 0.0 0.0 0.26309034907597534 0.006416837782340862 35 0.0 0.0 0.0 0.3080082135523614 0.006416837782340862 36 0.0 0.0 0.0 0.32725872689938396 0.006416837782340862 37 0.0 0.0 0.0 0.4940965092402464 0.006416837782340862 38 0.0 0.0 0.0 0.6160164271047228 0.006416837782340862 39 0.0 0.0 0.0 0.7379363449691991 0.006416837782340862 40 0.0 0.0 0.0 0.8662731006160165 0.006416837782340862 41 0.0 0.0 0.0 1.0587782340862424 0.006416837782340862 42 0.0 0.0 0.0 1.251283367556468 0.006416837782340862 43 0.0 0.0 0.0 1.4309548254620124 0.006416837782340862 44 0.0 0.0 0.0 1.6876283367556468 0.006416837782340862 45 0.0 0.0 0.0 1.7774640657084189 0.006416837782340862 46 0.0 0.0 0.0 1.9378850102669405 0.006416837782340862 47 0.0 0.0 0.0 2.1303901437371664 0.006416837782340862 48 0.0 0.0 0.0 2.284394250513347 0.006416837782340862 49 0.0 0.0 0.0 2.419147843942505 0.006416837782340862 50 0.0 0.0 0.0 2.5859856262833674 0.006416837782340862 51 0.0 0.0 0.0 2.797741273100616 0.006416837782340862 52 0.0 0.0 0.0 2.9324948665297743 0.006416837782340862 53 0.0 0.0 0.0 3.176334702258727 0.006416837782340862 54 0.0 0.0 0.0 3.413757700205339 0.006416837782340862 55 0.0 0.0 0.0 3.638347022587269 0.006416837782340862 56 0.0 0.0 0.0 3.824435318275154 0.006416837782340862 57 0.0 0.0 0.0 3.965605749486653 0.006416837782340862 58 0.0 0.0 0.0 4.100359342915811 0.006416837782340862 59 0.0 0.0 0.0 4.260780287474333 0.006416837782340862 60 0.0 0.0 0.0 4.382700205338809 0.006416837782340862 61 0.0 0.0 0.0 4.511036960985626 0.006416837782340862 62 0.0 0.0 0.0 4.581622176591376 0.006416837782340862 63 0.0 0.0 0.0 4.671457905544147 0.006416837782340862 64 0.0 0.0 0.0 4.729209445585216 0.006416837782340862 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTCCG 15 0.002183747 70.0 48 GTATCAT 15 0.002183747 70.0 57 TGCCTAC 20 7.685639E-5 70.0 19 AGTGTAG 20 7.685639E-5 70.0 35 GATCTCG 25 2.7113474E-6 70.0 41 CGTGTAT 15 0.002183747 70.0 35 CTGCCTA 15 0.002183747 70.0 18 ATCCGAC 15 0.002183747 70.0 10 AGATCTC 15 0.002183747 70.0 40 TCTCGGT 45 3.45608E-10 62.222218 43 ATCTCGG 35 2.788256E-7 60.000004 42 TCGGTGG 35 2.788256E-7 60.000004 45 CGCTTCC 35 2.788256E-7 60.000004 16 CGGTGGT 35 2.788256E-7 60.000004 46 CCGTATC 30 7.999513E-6 58.333332 55 TGTAGAT 30 7.999513E-6 58.333332 37 CGTATCA 25 2.3181946E-4 55.999996 56 TTACGCT 25 2.3181946E-4 55.999996 13 CTCGGTG 45 2.4791007E-8 54.444443 44 CTCTGCC 20 0.0068244096 52.5 16 >>END_MODULE