##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779763_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 16542 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.040805223068553 32.0 21.0 34.0 12.0 34.0 2 26.341977995405635 31.0 21.0 34.0 12.0 34.0 3 25.79839197195019 31.0 21.0 34.0 11.0 34.0 4 26.999879095635354 32.0 21.0 34.0 12.0 34.0 5 26.91083303107242 32.0 23.0 34.0 11.0 34.0 6 28.68764357393302 34.0 21.0 38.0 11.0 38.0 7 29.65953330915246 34.0 22.0 38.0 12.0 38.0 8 29.08324265505985 34.0 21.0 38.0 11.0 38.0 9 30.461189698948132 36.0 26.0 38.0 12.0 38.0 10-11 29.80561600773788 36.0 23.0 38.0 11.0 38.0 12-13 29.399679603433682 35.5 23.0 38.0 11.0 38.0 14-15 28.873413130214 34.0 21.0 38.0 11.0 38.0 16-17 28.883871357756014 34.5 22.0 38.0 11.0 38.0 18-19 29.32459799298755 34.0 22.5 38.0 11.0 38.0 20-21 28.446439366461128 32.5 21.5 37.5 11.0 38.0 22-23 28.416606214484343 33.5 17.0 37.5 11.0 38.0 24-25 29.28439729174223 35.0 22.0 38.0 11.0 38.0 26-27 27.975123926973765 32.5 21.0 38.0 11.0 38.0 28-29 29.518951759158504 36.0 21.5 38.0 11.0 38.0 30-31 30.03645266594124 37.0 22.5 38.0 11.0 38.0 32-33 30.083877402974245 37.0 22.5 38.0 11.0 38.0 34-35 30.16866158868335 37.0 23.0 38.0 11.0 38.0 36-37 28.71656994317495 34.0 22.0 38.0 11.0 38.0 38-39 27.68126586869786 31.5 21.0 37.0 11.0 38.0 40-41 28.06601378309757 33.5 21.0 37.5 11.0 38.0 42-43 28.895689759400312 35.0 21.5 38.0 11.0 38.0 44-45 30.191603191875227 37.0 23.5 38.0 11.0 38.0 46-47 29.12755410470318 35.5 22.0 38.0 11.0 38.0 48-49 28.388647080159593 33.5 16.5 38.0 11.0 38.0 50-51 26.883720227300206 31.0 16.0 37.0 11.0 38.0 52-53 29.22219199613106 35.0 21.5 38.0 11.0 38.0 54-55 28.618818764357393 34.5 21.0 38.0 11.0 38.0 56-57 29.021974368274698 35.5 22.0 38.0 11.0 38.0 58-59 29.767833393785516 36.5 22.0 38.0 11.0 38.0 60-61 30.22267561358965 37.0 23.0 38.0 11.0 38.0 62-63 30.237395719985493 37.0 23.0 38.0 11.0 38.0 64-65 29.977239753355096 37.0 22.5 38.0 11.0 38.0 66-67 28.565681296094787 34.0 21.0 38.0 11.0 38.0 68-69 28.528896143150767 34.0 21.0 38.0 11.0 38.0 70-71 28.045822754201428 34.0 21.0 38.0 11.0 38.0 72-73 27.2339801716842 31.5 16.0 37.0 11.0 38.0 74-75 28.439970982952484 35.0 21.0 37.5 11.0 38.0 76 28.72300810059243 35.0 21.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 8.0 13 68.0 14 188.0 15 316.0 16 492.0 17 779.0 18 873.0 19 892.0 20 736.0 21 579.0 22 441.0 23 297.0 24 296.0 25 248.0 26 219.0 27 212.0 28 258.0 29 255.0 30 323.0 31 504.0 32 667.0 33 988.0 34 1436.0 35 2012.0 36 2247.0 37 1206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.70443141285291 19.128226830300466 13.729520585212502 38.43782117163413 2 15.935195260548907 14.514568975940032 48.43428847781405 21.115947285697015 3 18.171926006528835 15.693386531253777 42.23189457139403 23.90279289082336 4 12.821907870874139 21.629790835449157 31.88248095756257 33.66582033611413 5 12.75541047031798 24.990932172651434 44.22077136984645 18.032885987184137 6 23.00205537419901 35.73328497158747 16.539717083786726 24.72494257042679 7 21.62374561721678 24.918389553862895 20.49328980776206 32.96457502115827 8 18.347237335267803 33.635594244952244 17.839439003748037 30.177729416031916 9 19.526054890581552 14.937734252206505 19.042437431991292 46.49377342522065 10-11 20.979929875468503 23.8634989723129 28.554588320638373 26.601982831580216 12-13 20.505380244226817 17.812235521702334 32.490025389916575 29.192358844154278 14-15 22.64236488937251 22.470076169749728 24.02369725547092 30.863861685406846 16-17 26.051867972433808 20.65651070003627 24.945593035908598 28.346028291621327 18-19 19.831338411316647 20.209164550840285 30.24120420747189 29.71829283037118 20-21 25.837262725184377 19.571394027324388 25.761697497279652 28.82964575021158 22-23 26.93144722524483 18.773425220650466 24.95768347237335 29.337444081731352 24-25 20.63232982710676 24.709829524845848 22.63027445290775 32.02756619513964 26-27 24.585902551082096 23.135050175311328 26.045822754201424 26.23322451940515 28-29 22.068069157296577 23.787933744408175 25.371780921291258 28.77221617700399 30-31 21.505863861685405 23.346632813444565 26.611050658928786 28.53645266594124 32-33 21.602587353403457 22.950671019223794 26.45992020311933 28.986821424253417 34-35 21.629790835449157 23.225728448797 26.00652883569097 29.137951880062868 36-37 26.184862773546126 19.444444444444446 30.552532946439364 23.818159835570064 38-39 25.29923830250272 17.567404183291018 35.03808487486398 22.09527263934228 40-41 23.334542376979808 24.035787691935678 24.740055616007737 27.88961431507677 42-43 18.42280256317253 24.66449038810301 27.532946439366462 29.379760609357998 44-45 18.812719139160926 20.756256800870514 30.45278684560513 29.97823721436344 46-47 24.652399951638255 19.65300447346149 27.925885624471043 27.76870995042921 48-49 24.649377342522065 20.25148107846693 29.57925281102648 25.519888767984522 50-51 31.906661830492084 17.92709466811752 27.678031676943537 22.488211824446864 52-53 19.093821786966508 22.013662193205175 29.618546729536938 29.27396929029138 54-55 24.241325111836538 20.444928061903035 27.36065771974368 27.953089106516742 56-57 23.99951638254141 20.65046548180389 26.03977753596905 29.31024059968565 58-59 19.32051747068069 23.06855277475517 28.90521097811631 28.70571877644783 60-61 18.52859388223915 21.327529923830248 29.074477088622903 31.0693991053077 62-63 18.564865191633416 22.986942328618063 28.27650828194898 30.171684197799543 64-65 19.06359569580462 24.885140853584815 26.952605489058158 29.09865796155241 66-67 17.198645871115946 28.7691935678878 21.871599564744287 32.16056099625197 68-69 17.981501632208925 28.524362229476484 21.92902913795188 31.565107000362712 70-71 18.371418208197316 29.594365856607425 21.112924676580825 30.921291258614435 72-73 17.86059726756136 30.192842461612862 20.472131543948738 31.47442872687704 74-75 19.601620118486277 25.90980534397292 23.603554588320637 30.885019949220165 76 20.40261153427639 24.168782493048 25.6377705235159 29.790835449159715 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.0 14 1.0 15 1.0 16 4.0 17 6.0 18 5.0 19 6.5 20 10.5 21 12.0 22 14.0 23 27.0 24 40.0 25 42.0 26 46.5 27 70.5 28 106.5 29 123.0 30 142.0 31 166.0 32 205.5 33 240.0 34 273.0 35 335.0 36 379.5 37 395.0 38 481.5 39 591.5 40 646.5 41 713.5 42 749.0 43 746.0 44 781.5 45 833.0 46 846.0 47 837.5 48 809.0 49 754.5 50 720.0 51 697.5 52 625.5 53 564.0 54 552.0 55 516.0 56 475.5 57 443.0 58 415.0 59 371.5 60 331.5 61 326.0 62 317.0 63 322.5 64 313.0 65 314.0 66 309.0 67 288.0 68 291.0 69 278.5 70 246.0 71 229.0 72 228.0 73 212.0 74 177.5 75 158.0 76 136.0 77 103.0 78 85.5 79 79.0 80 59.0 81 39.0 82 26.5 83 14.0 84 11.0 85 6.0 86 3.5 87 3.0 88 1.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0060452182323781885 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 16542.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.20203119332608 #Duplication Level Percentage of deduplicated Percentage of total 1 99.25045703839123 98.45846935074356 2 0.7068860450944546 1.4024906299117397 3 0.030469226081657527 0.09067827348567283 4 0.012187690432663009 0.04836174585902551 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0060452182323781885 0.0 21 0.0 0.0 0.0 0.0060452182323781885 0.0 22 0.0 0.0 0.0 0.06045218232378189 0.0 23 0.0 0.0 0.0 0.06045218232378189 0.0 24 0.0 0.0 0.0 0.1088139281828074 0.0 25 0.0 0.0 0.0 0.1088139281828074 0.0 26 0.0 0.0 0.0 0.1088139281828074 0.0 27 0.0 0.0 0.0 0.11485914641518559 0.0 28 0.0 0.0 0.0 0.13299480111232015 0.0 29 0.0 0.0 0.0 0.13904001934469834 0.0 30 0.0 0.0 0.0 0.1571756740418329 0.0 31 0.0 0.0 0.0 0.1571756740418329 0.0 32 0.0 0.0 0.0 0.18135654697134568 0.0 33 0.0 0.0 0.0 0.18740176520372384 0.0 34 0.0 0.0 0.0 0.19344698343610203 0.0 35 0.0 0.0 0.0 0.2659896022246403 0.0 36 0.0 0.0 0.0 0.29621569338653125 0.0 37 0.0 0.0 0.0 0.45339136742836417 0.0 38 0.0 0.0 0.0 0.5863861685406844 0.0 39 0.0 0.0 0.0 0.7254261878853827 0.0 40 0.0 0.0 0.0 0.8765566436948374 0.0 41 0.0 0.0 0.0 1.0700036271309394 0.0 42 0.0 0.0 0.0 1.215088864708016 0.0 43 0.0 0.0 0.0 1.40249062991174 0.0 44 0.0 0.0 0.0 1.6866158868335146 0.0 45 0.0 0.0 0.0 1.8377463426429694 0.0 46 0.0 0.0 0.0 2.049328980776206 0.0 47 0.0 0.0 0.0 2.212549873050417 0.0 48 0.0 0.0 0.0 2.442268165880788 0.0 49 0.0 0.0 0.0 2.593398621690243 0.0 50 0.0 0.0 0.0 2.786845605126345 0.0 51 0.0 0.0 0.0 3.034699552653851 0.0 52 0.0 0.0 0.0 3.330915246040382 0.0 53 0.0 0.0 0.0 3.5969048482650225 0.0 54 0.0 0.0 0.0 3.814532704630637 0.0 55 0.0 0.0 0.0 4.026115342763874 0.0 56 0.0 0.0 0.0 4.2497884173618665 0.0 57 0.0 0.0 0.0 4.419054527868456 0.0 58 0.0 0.0 0.0 4.570184983677911 0.0 59 0.0 0.0 0.0 4.757586748881635 0.0 60 0.0 0.0 0.0 4.902671986458711 0.0 61 0.0 0.0 0.0 4.9873050417120055 0.0 62 0.0 0.0 0.0 5.0598476605005445 0.0 63 0.0 0.0 0.0 5.186797243380486 0.0 64 0.0 0.0 0.0 5.30770160802805 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTACGA 15 0.0021861359 70.00001 21 ATCTCGG 15 0.0021861359 70.00001 42 CTTTACG 15 0.0021861359 70.00001 30 GTGTATC 15 0.0021861359 70.00001 36 GTCGCCC 15 0.0021861359 70.00001 57 CCTCTTA 15 0.0021861359 70.00001 9 ACGAGCC 15 0.0021861359 70.00001 24 CGTATCA 15 0.0021861359 70.00001 56 CGACGAC 15 0.0021861359 70.00001 22 AGATCTC 15 0.0021861359 70.00001 40 ACGTGTC 15 0.0021861359 70.00001 34 ACGCTTC 25 2.322404E-4 55.999996 15 TCGGTGG 25 2.322404E-4 55.999996 45 CTCGGTG 25 2.322404E-4 55.999996 44 TCCTTAA 20 0.0068318197 52.500004 60 TGTCTTA 20 0.0068318197 52.500004 56 CACGTGT 20 0.0068318197 52.500004 33 GCGGTCG 20 0.0068318197 52.500004 48 CCGTATC 20 0.0068318197 52.500004 55 GACGCTT 20 0.0068318197 52.500004 14 >>END_MODULE