##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779760_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11050 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.486968325791857 34.0 27.0 34.0 12.0 34.0 2 27.815384615384616 34.0 23.0 34.0 12.0 34.0 3 27.15683257918552 32.0 23.0 34.0 11.0 34.0 4 29.44841628959276 34.0 27.0 34.0 12.0 34.0 5 28.96552036199095 34.0 23.0 34.0 11.0 34.0 6 31.449411764705882 37.0 27.0 38.0 11.0 38.0 7 32.33049773755656 37.0 28.0 38.0 12.0 38.0 8 31.814570135746607 37.0 27.0 38.0 11.0 38.0 9 33.1764705882353 37.0 34.0 38.0 12.0 38.0 10-11 32.76814479638009 38.0 33.5 38.0 11.0 38.0 12-13 31.771809954751134 37.0 29.5 38.0 11.0 38.0 14-15 31.7931221719457 37.0 29.0 38.0 11.5 38.0 16-17 31.542262443438915 36.5 28.5 38.0 11.0 38.0 18-19 31.956199095022626 37.0 29.0 38.0 11.5 38.0 20-21 31.083031674208144 36.0 27.0 38.0 11.0 38.0 22-23 31.082398190045247 36.0 28.0 38.0 11.0 38.0 24-25 32.292307692307695 37.0 30.0 38.0 11.0 38.0 26-27 30.805067873303166 36.5 25.0 38.0 11.0 38.0 28-29 32.93660633484163 37.5 33.5 38.0 11.0 38.0 30-31 33.38054298642534 38.0 34.0 38.0 11.0 38.0 32-33 33.43334841628959 38.0 34.0 38.0 11.0 38.0 34-35 33.55289592760181 38.0 34.0 38.0 11.0 38.0 36-37 31.561764705882354 37.0 28.0 38.0 11.0 38.0 38-39 29.65701357466063 35.0 23.0 38.0 11.0 38.0 40-41 30.88904977375566 36.0 26.5 38.0 11.0 38.0 42-43 32.03981900452489 37.0 30.0 38.0 11.0 38.0 44-45 33.59633484162896 38.0 34.5 38.0 16.0 38.0 46-47 32.16371040723982 37.5 29.5 38.0 11.0 38.0 48-49 31.54081447963801 36.5 28.5 38.0 16.0 38.0 50-51 29.433529411764706 35.0 22.5 38.0 11.0 38.0 52-53 32.787013574660634 37.0 32.5 38.0 11.0 38.0 54-55 31.919592760180997 37.0 29.5 38.0 11.0 38.0 56-57 32.24384615384616 37.5 30.0 38.0 11.0 38.0 58-59 33.321312217194574 38.0 34.0 38.0 11.0 38.0 60-61 33.786923076923074 38.0 36.0 38.0 20.5 38.0 62-63 33.6410407239819 38.0 35.0 38.0 11.0 38.0 64-65 33.35977375565611 38.0 35.0 38.0 11.0 38.0 66-67 31.63099547511312 37.0 27.0 38.0 11.0 38.0 68-69 31.552805429864254 37.0 27.0 38.0 11.0 38.0 70-71 30.988733031674208 36.5 25.5 38.0 11.0 38.0 72-73 29.856968325791854 35.0 23.5 38.0 11.0 38.0 74-75 31.940135746606334 36.5 30.0 38.0 11.0 38.0 76 32.533574660633484 37.0 32.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 20.0 14 59.0 15 103.0 16 177.0 17 234.0 18 259.0 19 287.0 20 249.0 21 227.0 22 168.0 23 120.0 24 116.0 25 117.0 26 136.0 27 134.0 28 163.0 29 205.0 30 291.0 31 375.0 32 501.0 33 855.0 34 1167.0 35 1696.0 36 2197.0 37 1191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.18552036199095 20.38009049773756 12.60633484162896 35.828054298642535 2 17.44796380090498 16.895927601809955 41.755656108597286 23.900452488687783 3 17.32126696832579 17.429864253393664 37.0316742081448 28.217194570135746 4 10.895927601809955 19.20361990950226 33.918552036199095 35.98190045248869 5 12.39819004524887 29.6289592760181 40.77828054298642 17.194570135746606 6 23.945701357466064 34.71493212669684 16.914027149321267 24.425339366515836 7 23.51131221719457 29.30316742081448 20.38914027149321 26.796380090497742 8 20.488687782805428 33.7737556561086 17.6289592760181 28.108597285067873 9 20.46153846153846 16.16289592760181 19.257918552036198 44.11764705882353 10-11 21.380090497737555 24.923076923076923 28.167420814479637 25.529411764705884 12-13 21.429864253393667 20.823529411764703 29.81447963800905 27.932126696832576 14-15 21.149321266968325 23.09049773755656 24.144796380090497 31.615384615384617 16-17 22.751131221719454 24.542986425339368 25.669683257918553 27.036199095022624 18-19 18.914027149321267 25.33031674208145 28.34841628959276 27.407239819004523 20-21 22.34841628959276 24.79638009049774 26.27601809954751 26.579185520361992 22-23 22.601809954751133 23.67420814479638 26.823529411764707 26.900452488687783 24-25 19.74660633484163 26.529411764705884 24.850678733031675 28.873303167420815 26-27 21.031674208144796 25.122171945701353 27.733031674208146 26.1131221719457 28-29 20.104072398190045 25.86425339366516 27.41628959276018 26.615384615384613 30-31 20.004524886877828 26.416289592760183 27.239819004524886 26.339366515837103 32-33 20.36651583710407 25.769230769230766 26.855203619909503 27.009049773755656 34-35 19.84162895927602 25.846153846153847 27.339366515837106 26.972850678733028 36-37 21.529411764705884 23.74660633484163 30.438914027149323 24.285067873303166 38-39 21.710407239819006 22.43891402714932 33.4841628959276 22.366515837104075 40-41 19.914027149321267 25.15837104072398 26.823529411764707 28.104072398190045 42-43 18.56561085972851 26.18099547511312 27.624434389140273 27.6289592760181 44-45 17.877828054298643 25.588235294117645 28.61990950226244 27.914027149321267 46-47 21.69230769230769 24.02714932126697 28.53393665158371 25.746606334841626 48-49 21.8868778280543 24.108597285067873 28.728506787330314 25.27601809954751 50-51 24.330316742081447 22.199095022624434 29.434389140271495 24.036199095022624 52-53 18.466063348416288 24.95022624434389 28.886877828054295 27.69683257918552 54-55 21.04977375565611 24.63348416289593 27.542986425339365 26.773755656108598 56-57 21.040723981900452 25.02714932126697 27.34841628959276 26.58371040723982 58-59 19.321266968325794 25.687782805429865 28.34841628959276 26.642533936651585 60-61 18.58823529411765 25.325791855203622 27.877828054298643 28.20814479638009 62-63 18.402714932126695 25.674208144796378 28.56561085972851 27.35746606334842 64-65 19.39819004524887 26.647058823529413 27.633484162895925 26.32126696832579 66-67 17.90950226244344 26.294117647058822 24.60633484162896 31.19004524886878 68-69 18.185932832443196 26.65882139947497 24.468181406716756 30.687064361365074 70-71 18.171945701357465 27.203619909502265 24.36651583710407 30.2579185520362 72-73 17.475113122171944 25.782805429864254 24.226244343891405 32.515837104072396 74-75 19.33031674208145 26.475113122171944 25.520361990950224 28.67420814479638 76 20.289592760180998 24.97737556561086 26.407239819004523 28.32579185520362 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.5 17 1.0 18 2.0 19 2.5 20 5.0 21 8.0 22 11.5 23 16.5 24 18.0 25 18.0 26 27.0 27 45.5 28 78.5 29 102.0 30 99.5 31 130.5 32 194.5 33 225.0 34 226.5 35 264.0 36 328.0 37 356.0 38 399.5 39 463.0 40 514.5 41 586.0 42 626.0 43 628.0 44 635.5 45 634.0 46 627.0 47 623.0 48 610.0 49 575.0 50 549.0 51 523.5 52 457.0 53 370.5 54 325.0 55 306.0 56 277.0 57 243.0 58 219.0 59 213.5 60 185.5 61 145.5 62 128.0 63 134.5 64 131.0 65 126.5 66 131.0 67 130.0 68 114.0 69 84.5 70 81.5 71 92.0 72 96.0 73 86.0 74 64.5 75 57.0 76 51.5 77 32.5 78 19.0 79 19.0 80 18.0 81 15.5 82 10.0 83 6.0 84 6.5 85 3.5 86 1.5 87 3.0 88 2.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.027149321266968326 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 11050.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.32579185520362 #Duplication Level Percentage of deduplicated Percentage of total 1 98.6010124252186 96.9502262443439 2 1.1780947998159228 2.3167420814479636 3 0.14726184997699035 0.4343891402714932 4 0.06442705936493327 0.25339366515837103 5 0.009203865623561897 0.04524886877828054 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.00904977375565611 10 0.0 0.0 0.0 0.0 0.00904977375565611 11 0.0 0.0 0.0 0.0 0.00904977375565611 12 0.0 0.0 0.0 0.0 0.00904977375565611 13 0.0 0.0 0.0 0.0 0.00904977375565611 14 0.0 0.0 0.0 0.03619909502262444 0.00904977375565611 15 0.0 0.0 0.0 0.03619909502262444 0.00904977375565611 16 0.0 0.0 0.0 0.03619909502262444 0.00904977375565611 17 0.0 0.0 0.0 0.03619909502262444 0.00904977375565611 18 0.0 0.0 0.0 0.03619909502262444 0.00904977375565611 19 0.0 0.0 0.0 0.03619909502262444 0.00904977375565611 20 0.0 0.0 0.0 0.04524886877828054 0.00904977375565611 21 0.0 0.0 0.0 0.08144796380090498 0.00904977375565611 22 0.0 0.0 0.0 0.11764705882352941 0.00904977375565611 23 0.0 0.0 0.0 0.12669683257918551 0.00904977375565611 24 0.0 0.0 0.0 0.14479638009049775 0.00904977375565611 25 0.0 0.0 0.0 0.16289592760180996 0.00904977375565611 26 0.0 0.0 0.0 0.16289592760180996 0.00904977375565611 27 0.0 0.0 0.0 0.16289592760180996 0.00904977375565611 28 0.0 0.0 0.0 0.16289592760180996 0.00904977375565611 29 0.0 0.0 0.0 0.17194570135746606 0.00904977375565611 30 0.0 0.0 0.0 0.18099547511312217 0.00904977375565611 31 0.0 0.0 0.0 0.18099547511312217 0.00904977375565611 32 0.0 0.0 0.0 0.18099547511312217 0.00904977375565611 33 0.0 0.0 0.0 0.18099547511312217 0.00904977375565611 34 0.0 0.0 0.0 0.2081447963800905 0.00904977375565611 35 0.0 0.0 0.0 0.24434389140271492 0.00904977375565611 36 0.0 0.0 0.0 0.2986425339366516 0.00904977375565611 37 0.0 0.0 0.0 0.3891402714932127 0.00904977375565611 38 0.0 0.0 0.0 0.45248868778280543 0.00904977375565611 39 0.0 0.0 0.0 0.5701357466063348 0.00904977375565611 40 0.0 0.0 0.0 0.6877828054298643 0.00904977375565611 41 0.0 0.0 0.0 0.8416289592760181 0.00904977375565611 42 0.0 0.0 0.0 0.9683257918552036 0.00904977375565611 43 0.0 0.0 0.0 1.0407239819004526 0.00904977375565611 44 0.0 0.0 0.0 1.1312217194570136 0.00904977375565611 45 0.0 0.0 0.0 1.1945701357466063 0.00904977375565611 46 0.0 0.0 0.0 1.339366515837104 0.00904977375565611 47 0.0 0.0 0.0 1.583710407239819 0.00904977375565611 48 0.0 0.0 0.0 1.7194570135746607 0.00904977375565611 49 0.0 0.0 0.0 1.8552036199095023 0.00904977375565611 50 0.0 0.0 0.0 2.0 0.00904977375565611 51 0.0 0.0 0.0 2.235294117647059 0.00904977375565611 52 0.0 0.0 0.0 2.434389140271493 0.00904977375565611 53 0.0 0.0 0.0 2.669683257918552 0.00904977375565611 54 0.0 0.0 0.0 2.9049773755656108 0.00904977375565611 55 0.0 0.0 0.0 3.158371040723982 0.00904977375565611 56 0.0 0.0 0.0 3.2941176470588234 0.00904977375565611 57 0.0 0.0 0.0 3.411764705882353 0.00904977375565611 58 0.0 0.0 0.0 3.5565610859728505 0.00904977375565611 59 0.0 0.0 0.0 3.683257918552036 0.00904977375565611 60 0.0 0.0 0.0 3.8099547511312215 0.00904977375565611 61 0.0 0.0 0.0 3.936651583710407 0.00904977375565611 62 0.0 0.0 0.0 4.0633484162895925 0.00904977375565611 63 0.0 0.0 0.0 4.262443438914027 0.00904977375565611 64 0.0 0.0 0.0 4.416289592760181 0.00904977375565611 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATGT 20 7.603865E-5 69.96833 31 TATGTGT 15 0.002170782 69.96832 33 TTCTATG 15 0.002170782 69.96832 30 CTATGTG 15 0.002170782 69.96832 32 TTTCTAT 20 0.0067842584 52.476246 29 >>END_MODULE