##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779758_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18247 Sequences flagged as poor quality 0 Sequence length 76 %GC 54 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 22.977475749438263 23.0 12.0 33.0 12.0 34.0 2 23.347728393708554 23.0 12.0 33.0 12.0 34.0 3 23.541732887597963 23.0 11.0 32.0 11.0 34.0 4 23.435304433605523 23.0 12.0 33.0 11.0 34.0 5 23.693045432125828 23.0 11.0 34.0 11.0 34.0 6 24.63435085219488 26.0 12.0 36.0 11.0 38.0 7 25.780402257905408 27.0 12.0 36.0 12.0 38.0 8 24.74236860853839 26.0 11.0 36.0 11.0 38.0 9 26.380117279552803 28.0 12.0 37.0 12.0 38.0 10-11 25.424343727736066 27.0 11.0 37.0 11.0 38.0 12-13 25.904778867759084 28.0 11.0 36.0 11.0 38.0 14-15 24.620019729270567 26.0 11.0 36.0 11.0 38.0 16-17 24.87724009426207 26.5 11.0 35.5 11.0 38.0 18-19 25.262865128514278 27.0 11.5 36.5 11.0 38.0 20-21 24.341645201951003 25.5 11.0 35.0 11.0 38.0 22-23 24.613388502219543 25.5 11.0 35.5 11.0 38.0 24-25 24.553214226996218 25.5 11.0 36.0 11.0 38.0 26-27 23.662656875102755 23.0 11.0 34.5 10.0 38.0 28-29 24.50115087411629 26.0 11.0 36.5 11.0 38.0 30-31 25.026661917027454 26.0 11.0 37.0 11.0 38.0 32-33 25.221022633857622 26.0 11.0 37.0 11.0 38.0 34-35 25.179947388611826 26.5 11.0 37.0 11.0 38.0 36-37 24.446785773003782 25.5 11.0 35.0 11.0 38.0 38-39 24.390502548364115 25.5 11.0 34.0 11.0 37.5 40-41 23.73214775031512 25.0 11.0 34.0 11.0 37.5 42-43 24.223982024442375 26.0 11.0 35.0 11.0 38.0 44-45 25.096646024003945 26.0 11.0 37.0 11.0 38.0 46-47 24.61555324162876 26.0 11.0 35.5 11.0 38.0 48-49 23.717433002685375 24.0 11.0 35.0 11.0 38.0 50-51 23.102098975174002 23.0 11.0 34.0 11.0 37.5 52-53 24.031868252315448 24.0 11.0 35.5 11.0 38.0 54-55 23.85082479311668 24.0 11.0 35.0 11.0 38.0 56-57 24.19855318682523 24.5 11.0 35.5 11.0 38.0 58-59 24.463199430043296 25.0 11.0 37.0 11.0 38.0 60-61 25.051761933468512 26.0 11.0 37.0 11.0 38.0 62-63 25.08080780402258 26.5 11.0 37.0 11.0 38.0 64-65 25.05398147640708 26.0 11.0 37.0 11.0 38.0 66-67 24.30714638022689 25.0 11.0 35.5 11.0 38.0 68-69 24.005288540582015 25.0 11.0 35.5 11.0 38.0 70-71 23.750835753822546 24.5 11.0 34.0 11.0 38.0 72-73 23.274894503206006 24.0 11.0 34.0 11.0 37.5 74-75 23.307721817285035 23.5 11.0 35.0 11.0 38.0 76 23.028991067024716 23.0 11.0 34.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores fail #Quality Count 11 4.0 12 20.0 13 123.0 14 375.0 15 664.0 16 1054.0 17 1382.0 18 1803.0 19 1779.0 20 1424.0 21 1074.0 22 753.0 23 505.0 24 424.0 25 328.0 26 256.0 27 267.0 28 278.0 29 301.0 30 326.0 31 416.0 32 602.0 33 661.0 34 904.0 35 1063.0 36 1023.0 37 438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.45881514769551 20.90754644599112 13.952978571820024 40.68065983449334 2 13.169288102153779 15.109333041047842 50.11234723516195 21.609031621636436 3 13.492628925302789 12.040335397599605 51.246780292650854 23.22025538444676 4 12.845947279004768 25.0232914999726 23.669644325094534 38.4611168959281 5 12.708938455636542 20.35403079958349 45.75546665205239 21.181564092727573 6 20.41979503480024 35.4359620759577 15.651887981586013 28.492354907656054 7 19.674467035677097 17.92075409656382 16.64931221570669 45.75546665205239 8 16.578067627555214 33.528799254671995 17.553570449936977 32.33956266783581 9 16.238285745602017 14.5722584534444 17.126102921028114 52.06335287992546 10-11 18.34822162547268 21.524086151148133 29.103414259878335 31.02427796350085 12-13 16.723296980325532 14.703786923877898 34.93999013536472 33.632925960431855 14-15 24.705431029758316 20.866443798980654 22.066641091686304 32.36148407957472 16-17 30.248808023236695 15.440894393598947 21.30213185729161 33.00816572587274 18-19 18.46878939003672 14.547596865238122 30.876308434263166 36.107305310461996 20-21 29.993971611771798 14.80243327670302 22.516030032334083 32.6875650791911 22-23 32.19981366800022 13.287115690250454 20.54584315229901 33.967227489450316 24-25 20.29100674083411 22.135145503370417 19.23603880089878 38.337808954896694 26-27 28.763632377925134 21.03633473995725 21.455581739464023 28.74445114265359 28-29 21.94059297418754 20.77875815202499 23.316161560804517 33.96448731298295 30-31 21.042391691557285 19.83668100731647 25.413092921930236 33.70783437919601 32-33 22.239272209130267 18.83597303666356 25.132898558667176 33.791856195539 34-35 21.37063626897572 19.526497506439412 24.861621088398092 34.24124513618677 36-37 29.073272318737324 13.295336219652546 31.125664492793337 26.505726968816788 38-39 28.67868690743684 10.927823751849619 37.75141119088069 22.64207814983285 40-41 24.09163150106867 23.461390913574835 22.428344385378416 30.01863319997808 42-43 16.73973803912972 24.061489559927658 26.837288321367897 32.36148407957472 44-45 17.18364662684277 15.931385981257193 31.97511919767633 34.909848194223706 46-47 28.382747848961472 14.914780511864963 25.228804735024934 31.47366690414863 48-49 27.977201731791528 14.827094864909302 29.706253082698524 27.489450320600646 50-51 41.193072833890504 12.36641639721598 23.255877678522495 23.184633090371022 52-53 17.120622568093385 18.296158272592756 30.267989258508248 34.31522990080561 54-55 27.714144790924532 15.035348276429003 24.546500794651173 32.70400613799529 56-57 27.429166438318624 16.08757603989697 22.822929796678906 33.660327725105496 58-59 17.797446155532416 20.25538444675837 28.785553789664053 33.16161560804516 60-61 16.93977092124733 17.057598509344 28.508795966460237 37.493834602948425 62-63 17.942675508302734 20.707513563873515 27.10856579163698 34.24124513618677 64-65 18.046802214062584 22.647558502767577 26.14402367512468 33.16161560804516 66-67 15.476516687674685 33.0191264317422 18.00021921411739 33.504137666465724 68-69 16.417705906536934 31.508839249006442 18.152665478963957 33.92078936549267 70-71 16.961692332986246 33.73431248972434 16.816462980215928 32.48753219707349 72-73 16.473940921795364 36.65808078040226 15.706691510933304 31.161286786869073 74-75 18.953800624760234 25.116457499862992 20.710253740340878 35.219488135035895 76 20.91850715186058 21.943333150654905 23.46687126650956 33.671288430974954 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.5 16 1.0 17 1.0 18 1.0 19 2.5 20 4.0 21 4.0 22 4.5 23 9.5 24 17.0 25 20.0 26 23.5 27 32.0 28 43.5 29 50.0 30 62.5 31 90.5 32 139.5 33 173.0 34 184.5 35 220.5 36 267.0 37 289.0 38 355.5 39 457.0 40 495.5 41 550.0 42 601.0 43 639.5 44 693.5 45 726.5 46 744.0 47 761.0 48 782.5 49 765.5 50 744.0 51 743.0 52 709.5 53 655.5 54 634.0 55 628.0 56 597.5 57 536.0 58 499.0 59 531.5 60 548.5 61 526.0 62 519.0 63 526.5 64 521.5 65 505.0 66 496.0 67 491.0 68 495.5 69 494.5 70 458.5 71 428.0 72 410.0 73 375.5 74 320.5 75 282.0 76 245.5 77 186.0 78 144.5 79 126.0 80 105.0 81 69.0 82 41.0 83 28.0 84 22.0 85 11.5 86 5.5 87 4.0 88 3.0 89 1.0 90 1.0 91 1.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.002740176467364498 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.024661588206280484 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 18247.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.6985805885899 #Duplication Level Percentage of deduplicated Percentage of total 1 99.70316622691293 99.40264153011455 2 0.29133685136323656 0.5809174110812736 3 0.005496921723834653 0.01644105880418699 4 0.0 0.0 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.005480352934728996 0.0 15 0.0 0.0 0.0 0.005480352934728996 0.0 16 0.0 0.0 0.0 0.005480352934728996 0.0 17 0.0 0.0 0.0 0.01644105880418699 0.0 18 0.0 0.0 0.0 0.01644105880418699 0.0 19 0.0 0.0 0.0 0.027401764673644982 0.0 20 0.0 0.0 0.0 0.027401764673644982 0.0 21 0.0 0.0 0.0 0.027401764673644982 0.0 22 0.0 0.0 0.0 0.06028388228201896 0.0 23 0.0 0.0 0.0 0.06576423521674796 0.0 24 0.0 0.0 0.0 0.07672494108620595 0.0 25 0.0 0.0 0.0 0.07672494108620595 0.0 26 0.0 0.0 0.0 0.08768564695566394 0.0 27 0.0 0.0 0.0 0.12056776456403792 0.0 28 0.0 0.0 0.0 0.1644105880418699 0.0 29 0.0 0.0 0.0 0.1808516468460569 0.0 30 0.0 0.0 0.0 0.20825341151970186 0.0 31 0.0 0.0 0.0 0.23565517619334686 0.0 32 0.0 0.0 0.0 0.29593905847536583 0.0 33 0.0 0.0 0.0 0.3397818819531978 0.0 34 0.0 0.0 0.0 0.40554611716994576 0.0 35 0.0 0.0 0.0 0.5041924699950677 0.0 36 0.0 0.0 0.0 0.5809174110812736 0.0 37 0.0 0.0 0.0 0.8439743519482654 0.0 38 0.0 0.0 0.0 1.0631884693374254 0.0 39 0.0 0.0 0.0 1.2385597632487533 0.0 40 0.0 0.0 0.0 1.441332821833726 0.0 41 0.0 0.0 0.0 1.589302351071409 0.0 42 0.0 0.0 0.0 1.7865950567216529 0.0 43 0.0 0.0 0.0 2.0003288211760837 0.0 44 0.0 0.0 0.0 2.1647394092179537 0.0 45 0.0 0.0 0.0 2.3236696443250944 0.0 46 0.0 0.0 0.0 2.4716391735627776 0.0 47 0.0 0.0 0.0 2.7018139968213952 0.0 48 0.0 0.0 0.0 2.844303173124349 0.0 49 0.0 0.0 0.0 2.9648709376883873 0.0 50 0.0 0.0 0.0 3.123801172795528 0.0 51 0.0 0.0 0.0 3.321093878445772 0.0 52 0.0 0.0 0.0 3.458102701813997 0.0 53 0.0 0.0 0.0 3.699238230942073 0.0 54 0.0 0.0 0.0 3.8526881131144846 0.0 55 0.0 0.0 0.0 3.9513344659396066 0.0 56 0.0 0.0 0.0 4.071902230503644 0.0 57 0.0 0.0 0.0 4.236312818545514 0.0 58 0.0 0.0 0.0 4.384282347783198 0.0 59 0.0 0.0 0.0 4.515810818216693 0.0 60 0.0 0.0 0.0 4.554173288759796 0.0 61 0.0 0.0 0.0 4.647339288650189 0.0 62 0.0 0.0 0.0 4.674741053323834 0.0 63 0.0 0.0 0.0 4.75146599441004 0.0 64 0.0 0.0 0.0 4.80626952375733 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGG 45 3.6379788E-12 69.980774 42 TCGTCTG 20 7.7316916E-5 69.980774 45 CTCGGTG 40 1.2369128E-10 69.980774 44 CTTGTAG 20 7.7316916E-5 69.980774 35 ATACCCA 20 7.7316916E-5 69.980774 4 TTACGCT 20 7.7316916E-5 69.980774 13 TGGTCGT 15 0.0021921804 69.98077 49 TGGTTGC 15 0.0021921804 69.98077 49 TTGTAGA 15 0.0021921804 69.98077 36 GTATATT 15 0.0021921804 69.98077 38 AGAACGG 15 0.0021921804 69.98077 27 CTGGTGG 15 0.0021921804 69.98077 45 CTGTGTA 15 0.0021921804 69.98077 34 CTTACGC 25 2.7346614E-6 69.98077 12 TTTGGTG 15 0.0021921804 69.98077 44 GGTGGTT 15 0.0021921804 69.98077 47 AAGTGTA 15 0.0021921804 69.98077 34 GTGGTTG 15 0.0021921804 69.98077 48 TGGTGTA 15 0.0021921804 69.98077 46 TACTCAT 15 0.0021921804 69.98077 5 >>END_MODULE