##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779756_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 33249 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.630214442539625 34.0 23.0 34.0 12.0 34.0 2 27.33931847574363 33.0 23.0 34.0 12.0 34.0 3 26.574062377815874 32.0 21.0 34.0 11.0 34.0 4 28.605191133567928 33.0 23.0 34.0 12.0 34.0 5 28.203885831152817 34.0 23.0 34.0 11.0 34.0 6 30.62883094228398 36.0 26.0 38.0 11.0 38.0 7 31.579897139763602 37.0 27.0 38.0 12.0 38.0 8 30.855063310174742 37.0 26.0 38.0 11.0 38.0 9 32.23540557610755 37.0 28.0 38.0 12.0 38.0 10-11 31.86682306234774 37.0 28.0 38.0 11.0 38.0 12-13 31.048227014346296 36.5 27.5 38.0 11.0 38.0 14-15 30.91462901139884 36.5 26.5 38.0 11.0 38.0 16-17 30.663072573611238 36.0 25.5 38.0 11.0 38.0 18-19 31.17287737977082 37.0 26.5 38.0 11.5 38.0 20-21 30.18371981112214 35.5 24.5 38.0 11.0 38.0 22-23 30.221510421366055 35.5 24.5 38.0 11.0 38.0 24-25 31.343183253631686 36.5 27.0 38.0 11.0 38.0 26-27 29.843905079852025 35.5 24.0 38.0 11.0 38.0 28-29 31.806625763180847 37.0 29.0 38.0 11.0 38.0 30-31 32.31077626394779 38.0 31.0 38.0 11.0 38.0 32-33 32.38103401606063 38.0 31.0 38.0 11.0 38.0 34-35 32.43413335739421 38.0 31.5 38.0 11.0 38.0 36-37 30.45315648590935 36.5 25.0 38.0 11.0 38.0 38-39 29.114349303738457 34.0 23.0 37.5 11.0 38.0 40-41 30.032376913591385 35.0 24.5 38.0 11.0 38.0 42-43 31.022647297663088 36.5 25.5 38.0 11.0 38.0 44-45 32.455502421125445 37.5 31.5 38.0 11.0 38.0 46-47 31.155688892899033 37.0 28.0 38.0 11.0 38.0 48-49 30.39178621913441 35.5 24.0 38.0 11.0 38.0 50-51 28.544632921290866 34.0 21.5 38.0 11.0 38.0 52-53 31.62944750218052 37.0 28.5 38.0 11.0 38.0 54-55 30.74295467532858 36.5 25.5 38.0 11.0 38.0 56-57 31.175478961773287 37.0 27.0 38.0 11.0 38.0 58-59 32.19747962344732 37.5 31.5 38.0 11.0 38.0 60-61 32.66650124815784 38.0 34.0 38.0 11.0 38.0 62-63 32.555309934133355 38.0 33.0 38.0 11.0 38.0 64-65 32.278639959096516 38.0 30.5 38.0 11.0 38.0 66-67 30.6659899545851 37.0 24.5 38.0 11.0 38.0 68-69 30.515308731089654 36.5 24.5 38.0 11.0 38.0 70-71 30.088168065204968 36.5 24.0 38.0 11.0 38.0 72-73 29.090950103762516 34.0 22.0 38.0 11.0 38.0 74-75 30.794038918463713 36.5 25.5 38.0 11.0 38.0 76 31.37324430809949 37.0 27.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 18.0 13 123.0 14 240.0 15 464.0 16 692.0 17 972.0 18 1127.0 19 1167.0 20 985.0 21 737.0 22 543.0 23 438.0 24 385.0 25 361.0 26 386.0 27 465.0 28 489.0 29 631.0 30 810.0 31 1102.0 32 1498.0 33 2370.0 34 3534.0 35 4803.0 36 5770.0 37 3137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.997954825709048 21.03221149508256 14.902703840717013 32.06712983849138 2 18.03663268068213 16.144846461547715 43.85695810400313 21.96156275376703 3 17.93437396613432 18.602063219946466 38.449276669975035 25.01428614394418 4 12.791362146229963 21.829227946705167 33.07768654696382 32.30172336010105 5 12.28909140124515 29.57682937832717 40.97266083190472 17.161418388522964 6 24.773677403831694 35.017594514120724 16.93584769466751 23.27288038738007 7 23.435291286955998 25.83235586032663 22.1961562753767 28.53619657734067 8 19.7118710337153 34.30479112153749 18.593040392192247 27.39029745255496 9 21.32094198321754 16.039580137748505 20.280309182231044 42.35916869680291 10-11 22.653653548280374 24.73495044889243 27.566657142427474 25.04473886039972 12-13 21.889380131733287 20.384071701404554 30.130229480585886 27.596318686276277 14-15 22.590153087310895 23.271376582754367 23.45634455171584 30.682125778218893 16-17 24.92029595765159 22.37878970163619 25.697786333012512 27.00312800769971 18-19 20.179857737943067 22.877723807089044 28.61181707445449 28.33060138051341 20-21 24.152606093416342 22.296911185298807 26.66847123221751 26.88201148906734 22-23 25.49249601491774 21.30590393696051 26.244398327769257 26.95720172035249 24-25 21.06830280609943 25.528587325934616 23.67890763631989 29.724202231646064 26-27 23.304460284519834 24.188697404433217 26.620349484195017 25.886492826851935 28-29 21.875845890101957 25.122560076994798 26.01281241541099 26.988781617492258 30-31 21.25359038753628 24.942478608057506 26.31246522399507 27.491465780411144 32-33 21.597642034346897 24.764654576077476 25.9676982766399 27.670005112935726 34-35 21.94652470751 24.25185719871274 26.08800264669614 27.713615447081114 36-37 24.378910009624637 21.735141963426372 29.839388835418674 24.046559191530317 38-39 24.431544754571703 20.20271896053898 33.40050529355149 21.965230991337826 40-41 22.47169045220085 24.017624855256628 25.19512158443238 28.31556310811014 42-43 19.29080573851845 24.75563174832326 27.127131643056934 28.826430870101355 44-45 19.800893273380755 23.186008391356 29.022361911063655 27.990736424199586 46-47 23.997714216968934 21.69238172576619 27.901591025293992 26.408313031970888 48-49 23.545423101794068 22.61154638555123 28.942659067326343 24.90037144532836 50-51 27.573761616890735 20.484826611326657 28.817408042347136 23.124003729435472 52-53 19.630960795223846 23.599560882445825 28.563694602764034 28.205783719566295 54-55 22.936028151222594 22.57210743180246 27.63391380191885 26.85795061505609 56-57 23.011218382507746 22.787151493277992 26.50004511413877 27.70158501007549 58-59 19.731717220325727 24.39658931981894 28.17570717475976 27.695986285095568 60-61 19.57381536009143 23.157435673789795 28.086981367580492 29.18176759853828 62-63 19.429447945020076 24.817660947110394 27.25837255816052 28.494518549709007 64-65 19.908869439682398 25.746638996661552 26.910583776955697 27.433907786700352 66-67 18.527430221366696 26.995608758421557 23.15176852743022 31.32519249278152 68-69 18.55701114503587 27.41588581226405 23.500834749650306 30.526268293049768 70-71 19.319959095283927 27.339990375360923 22.669032723772858 30.67101780558229 72-73 18.852261790182865 27.057266602502406 21.998315688161693 32.09215591915303 74-75 20.41776948989413 26.05720644850818 24.74584937439846 28.779174687199234 76 21.883364913230473 25.06842311046949 25.31203945983338 27.736172516466663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.5 15 1.0 16 1.5 17 2.0 18 3.5 19 5.5 20 8.5 21 11.0 22 13.0 23 18.0 24 29.5 25 38.0 26 51.5 27 92.5 28 126.5 29 133.0 30 171.5 31 256.0 32 358.0 33 414.0 34 446.5 35 602.5 36 861.0 37 996.0 38 1074.5 39 1296.0 40 1488.5 41 1666.5 42 1795.0 43 1856.5 44 1947.5 45 1993.5 46 2010.0 47 2006.5 48 1924.5 49 1798.0 50 1750.0 51 1614.5 52 1399.0 53 1242.0 54 1165.0 55 1037.5 56 812.5 57 691.0 58 667.0 59 630.0 60 565.0 61 527.5 62 518.0 63 479.0 64 444.0 65 442.0 66 446.0 67 456.0 68 435.5 69 384.0 70 363.0 71 373.0 72 360.5 73 312.0 74 245.0 75 214.0 76 198.0 77 163.5 78 120.0 79 95.0 80 79.0 81 59.0 82 45.0 83 35.0 84 27.5 85 15.5 86 7.5 87 4.0 88 2.0 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0015038046257030285 12-13 0.0 14-15 0.0 16-17 0.003007609251406057 18-19 0.0015038046257030285 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0015038046257030285 32-33 0.0 34-35 0.0 36-37 0.003007609251406057 38-39 0.003007609251406057 40-41 0.0015038046257030285 42-43 0.0 44-45 0.0015038046257030285 46-47 0.0 48-49 0.0015038046257030285 50-51 0.0 52-53 0.0015038046257030285 54-55 0.0 56-57 0.0 58-59 0.0015038046257030285 60-61 0.0015038046257030285 62-63 0.0015038046257030285 64-65 0.0 66-67 0.003007609251406057 68-69 0.016541850882733314 70-71 0.003007609251406057 72-73 0.003007609251406057 74-75 0.003007609251406057 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 33249.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.6209810821378 #Duplication Level Percentage of deduplicated Percentage of total 1 97.9696838991928 95.63896658546122 2 1.7591965000924272 3.4346897651057176 3 0.18177336866103888 0.5323468374988721 4 0.05853718651796168 0.22857830310686034 5 0.015404522767884652 0.07519023128515144 6 0.015404522767884652 0.09022827754218171 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.006015218502812115 0.0 5 0.0 0.0 0.0 0.006015218502812115 0.0 6 0.0 0.0 0.0 0.006015218502812115 0.0 7 0.0 0.0 0.0 0.006015218502812115 0.0 8 0.0 0.0 0.0 0.006015218502812115 0.0 9 0.0 0.0 0.0 0.006015218502812115 0.0 10 0.0 0.0 0.0 0.006015218502812115 0.0 11 0.0 0.0 0.0 0.006015218502812115 0.0 12 0.0 0.0 0.0 0.006015218502812115 0.0 13 0.0 0.0 0.0 0.006015218502812115 0.0 14 0.0 0.0 0.0 0.009022827754218171 0.0 15 0.0 0.0 0.0 0.009022827754218171 0.0 16 0.0 0.0 0.0 0.009022827754218171 0.0 17 0.0 0.0 0.0 0.009022827754218171 0.0 18 0.0 0.0 0.0 0.009022827754218171 0.0 19 0.0 0.0 0.0 0.01203043700562423 0.0 20 0.0 0.0 0.0 0.015038046257030287 0.0 21 0.0 0.0 0.0 0.018045655508436342 0.0 22 0.0 0.0 0.0 0.04812174802249692 0.0 23 0.0 0.0 0.0 0.04812174802249692 0.0 24 0.0 0.0 0.0 0.07218262203374537 0.0 25 0.0 0.0 0.0 0.07218262203374537 0.0 26 0.0 0.0 0.0 0.07218262203374537 0.0 27 0.0 0.0 0.0 0.09022827754218173 0.0 28 0.0 0.0 0.0 0.09323588679358778 0.0 29 0.0 0.0 0.0 0.10225871454780595 0.0 30 0.0 0.0 0.0 0.10526632379921201 0.0 31 0.0 0.0 0.0 0.11128154230202413 0.0 32 0.0 0.0 0.0 0.12331197930764835 0.0 33 0.0 0.0 0.0 0.14135763481608468 0.0 34 0.0 0.0 0.0 0.1774489458329574 0.0 35 0.0 0.0 0.0 0.21654786610123614 0.0 36 0.0 0.0 0.0 0.24963156786670276 0.0 37 0.0 0.0 0.0 0.3819663749285693 0.0 38 0.0 0.0 0.0 0.4872326987277813 0.0 39 0.0 0.0 0.0 0.6496435983037084 0.0 40 0.0 0.0 0.0 0.8481458088965081 0.0 41 0.0 0.0 0.0 1.0737165027519624 0.0 42 0.0 0.0 0.0 1.311317633613041 0.0 43 0.0 0.0 0.0 1.5910252939938043 0.0 44 0.0 0.0 0.0 1.9038166561400343 0.0 45 0.0 0.0 0.0 2.093296038978616 0.0 46 0.0 0.0 0.0 2.315859123582664 0.0 47 0.0 0.0 0.0 2.6346657042317063 0.0 48 0.0 0.0 0.0 2.896327709104033 0.0 49 0.0 0.0 0.0 3.085807091942615 0.0 50 0.0 0.0 0.0 3.362507143071972 0.0 51 0.0 0.0 0.0 3.633191975698517 0.0 52 0.0 0.0 0.0 3.9519985563475593 0.0 53 0.0 0.0 0.0 4.285843183253632 0.0 54 0.0 0.0 0.0 4.610664982405486 0.0 55 0.0 0.0 0.0 4.809167192998285 0.0 56 0.0 0.0 0.0 5.079852025624831 0.0 57 0.0 0.0 0.0 5.272339017714819 0.0 58 0.0 0.0 0.0 5.4618184005534 0.0 59 0.0 0.0 0.0 5.6903967036602605 0.0 60 0.0 0.0 0.0 5.8528076032361875 0.0 61 0.0 0.0 0.0 6.003188065806491 0.0 62 0.0 0.0 0.0 6.147553309873981 0.0 63 0.0 0.0 0.0 6.328009864958345 0.0 64 0.0 0.0 0.0 6.469367499774429 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACAAA 15 0.0021940055 70.095024 63 GTACATC 15 0.0022071889 69.989456 38 GCTGCCT 20 7.821771E-5 69.989456 17 TTCCGAC 30 9.950054E-8 69.989456 19 CCCGTGT 35 3.5724952E-9 69.989456 33 ACAGACG 15 0.0022071889 69.989456 8 TTACGCT 15 0.0022071889 69.989456 13 GACGCTT 15 0.0022071889 69.989456 14 GACGAAT 15 0.0022071889 69.989456 23 ATCTCGG 35 2.8912473E-7 59.990963 42 GGTGGTC 35 2.8912473E-7 59.990963 47 CTTCCGA 30 8.210312E-6 58.324547 18 CGACGAA 30 8.210312E-6 58.324547 22 TCCGACG 30 8.210312E-6 58.324547 20 CCGTGTA 30 8.210312E-6 58.324547 34 CGCCGTA 30 8.210312E-6 58.324547 53 GTGGTCG 30 8.210312E-6 58.324547 48 CTGCCTA 25 2.3590148E-4 55.991566 18 TGCCTAC 25 2.3590148E-4 55.991566 19 TCGGTGG 50 9.349606E-10 55.991566 45 >>END_MODULE