##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779755_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 130360 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.710072108008593 34.0 31.0 34.0 12.0 34.0 2 27.936422215403496 34.0 23.0 34.0 12.0 34.0 3 26.82583614605707 32.0 21.0 34.0 11.0 34.0 4 29.489659404725376 34.0 27.0 34.0 12.0 34.0 5 28.886905492482356 34.0 23.0 34.0 11.0 34.0 6 31.35449524393986 37.0 27.0 38.0 11.0 38.0 7 32.46133783369132 37.0 31.0 38.0 12.0 38.0 8 31.670251610923597 37.0 27.0 38.0 11.0 38.0 9 33.190104326480515 37.0 34.0 38.0 21.0 38.0 10-11 32.93040810064437 37.0 33.5 38.0 11.5 38.0 12-13 31.837914237496165 37.0 29.5 38.0 16.0 38.0 14-15 31.963297790733353 36.5 29.0 38.0 11.5 38.0 16-17 31.619254372506905 36.5 29.0 38.0 16.0 38.0 18-19 32.11409558146671 37.0 29.5 38.0 11.5 38.0 20-21 31.08466937710954 35.5 27.0 38.0 16.0 38.0 22-23 31.063293955200983 35.5 27.5 38.0 11.0 38.0 24-25 32.36584841976066 37.0 30.5 38.0 16.5 38.0 26-27 30.824892605093588 36.5 25.0 38.0 11.0 38.0 28-29 33.077462411782754 37.0 33.5 38.0 21.0 38.0 30-31 33.57786897821418 38.0 34.0 38.0 21.0 38.0 32-33 33.6621049401657 38.0 34.0 38.0 21.0 38.0 34-35 33.73547100337527 38.0 34.0 38.0 21.0 38.0 36-37 31.409703896900886 36.5 27.5 38.0 11.0 38.0 38-39 29.515702669530533 34.5 23.0 37.5 11.0 38.0 40-41 30.861640840748695 35.0 26.5 38.0 11.0 38.0 42-43 32.02565971156797 36.5 30.0 38.0 16.0 38.0 44-45 33.78085685793188 37.5 34.0 38.0 21.0 38.0 46-47 32.215207885854554 37.0 29.5 38.0 16.0 38.0 48-49 31.538984351027924 36.5 28.5 38.0 16.0 38.0 50-51 29.276338600797793 34.5 22.5 38.0 11.0 38.0 52-53 32.9170029150046 37.0 32.5 38.0 21.0 38.0 54-55 31.916254986192087 37.0 29.5 38.0 16.0 38.0 56-57 32.330584535133475 37.0 30.0 38.0 16.0 38.0 58-59 33.54899125498619 37.5 34.0 38.0 21.0 38.0 60-61 34.02272552930347 38.0 35.0 38.0 21.0 38.0 62-63 33.9045029150046 38.0 34.5 38.0 21.0 38.0 64-65 33.556190549248235 38.0 34.5 38.0 16.0 38.0 66-67 31.398362227677204 37.0 27.0 38.0 11.0 38.0 68-69 31.472177048174288 37.0 27.5 38.0 11.0 38.0 70-71 30.908376802700214 36.5 25.5 38.0 11.0 38.0 72-73 29.583127493096043 34.5 23.5 38.0 11.0 38.0 74-75 31.855695765572264 36.5 29.0 38.0 16.0 38.0 76 32.42377262964099 37.0 31.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 28.0 13 188.0 14 514.0 15 852.0 16 1380.0 17 2121.0 18 2733.0 19 2897.0 20 2550.0 21 2118.0 22 1681.0 23 1502.0 24 1554.0 25 1719.0 26 1984.0 27 2370.0 28 2879.0 29 3560.0 30 4549.0 31 6071.0 32 8269.0 33 11375.0 34 15164.0 35 19752.0 36 21343.0 37 11206.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 40.35747161706045 18.02623504142375 11.0632095734888 30.553083768027 2 21.27262964099417 18.01319423135931 37.21540349800552 23.498772629640992 3 20.287664927891992 17.270635164160787 35.48327707885854 26.95842282908868 4 14.701595581466709 18.521785823872353 33.103712795335994 33.67290579932495 5 14.568119054924825 28.59849647131022 39.305768640687326 17.527615833077633 6 27.46624731512734 32.65265418840135 17.791500460263883 22.089598036207427 7 27.94645596808837 25.928198833998156 20.729518257134092 25.395826940779383 8 23.79582537454261 31.05884518905484 19.025920726608827 26.119408709793724 9 23.390790049018477 16.339493245575678 20.333080186254882 39.93663651915096 10-11 25.07728657016393 23.326352610866913 26.971670540584082 24.624690278385074 12-13 24.6520173214635 19.77584890897026 28.955150603911523 26.616983165654712 14-15 23.600595279190543 22.33716122400448 24.203545593323053 29.858697903481925 16-17 24.865754307368938 23.028889673054202 26.102348916061924 26.003007103514935 18-19 22.380205356766147 22.914884721748102 27.845518320631186 26.859391600854565 20-21 24.120988497194297 22.65734373022296 27.580651966293214 25.64101580628953 22-23 24.918494311861856 22.029549168066648 27.780590523093917 25.27136599697758 24-25 22.826962465192278 24.865947115273972 24.266448806756728 28.040641612777023 26-27 23.268435627766397 23.65774514993211 27.476430472771344 25.597388749530143 28-29 23.422241655735316 24.732086008637687 26.106751355871094 25.738920979755903 30-31 23.277730259246614 24.240843519985273 26.256438974059996 26.224987246708114 32-33 23.088164223413806 24.487760722313 26.37945979947683 26.044615254796373 34-35 23.412652751248476 24.205079818040947 26.41896608596261 25.963301344747965 36-37 24.02864397548309 22.29650426898028 29.85332811696929 23.821523638567342 38-39 23.933230284177863 21.24909384505038 32.85976748735219 21.957908383419568 40-41 23.15652604164669 23.190279114902363 25.63124000352873 28.021954839922213 42-43 21.161561533917872 23.368927346788485 27.132380579783522 28.337130539510124 44-45 21.201067820403654 22.327955875697114 29.460566589188318 27.010409714710914 46-47 23.02295967290329 21.120904578893672 29.995627459554004 25.860508288649037 48-49 22.900221695471735 21.71081398292408 30.472387790639694 24.91657653096449 50-51 24.4358869127298 20.49179384701537 31.92057349099989 23.151745749254946 52-53 19.58706341717871 23.821523638567342 29.52423691498094 27.06717602927301 54-55 21.53054257857148 22.74104588099019 28.930108392976315 26.79830314746201 56-57 21.522487898802538 23.026411678518553 28.27307665753803 27.17802376514088 58-59 19.632014789983007 24.03909219575248 28.74342678076228 27.585466233502228 60-61 19.9699290801904 23.225949976411204 28.43351219905108 28.37060874434732 62-63 20.07464031881312 23.99728441183352 27.75845073393756 28.169624535415792 64-65 20.73082794436901 24.0808076158915 26.514088018472066 28.674276421267425 66-67 19.76134951441415 24.3678945672686 23.479571641172768 32.39118427714448 68-69 20.29216793518291 24.474818929535967 23.508854038792045 31.724159096489075 70-71 21.153587990042844 24.396567926142136 22.969349908137943 31.480494175677077 72-73 21.27816261247785 24.35428317185618 21.52824124149464 32.83931297417133 74-75 23.422625211914788 24.469350025698265 23.211669313204304 28.896355449182643 76 24.750303011706222 23.311956304944843 23.977047822151306 27.96069286119762 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 1.0 7 1.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 1.0 15 5.0 16 4.5 17 1.0 18 5.0 19 9.0 20 20.0 21 31.0 22 34.5 23 69.5 24 126.5 25 152.0 26 205.5 27 320.5 28 454.0 29 526.0 30 661.5 31 895.5 32 1227.0 33 1460.0 34 1760.5 35 2370.0 36 3020.5 37 3362.0 38 3862.0 39 4711.5 40 5424.0 41 6210.0 42 6633.0 43 6858.0 44 7349.5 45 7650.5 46 7685.0 47 7677.0 48 7489.5 49 7051.5 50 6793.0 51 6322.0 52 5539.0 53 4851.5 54 4476.0 55 4159.5 56 3556.5 57 3049.5 58 2829.0 59 2708.5 60 2461.5 61 2222.0 62 2109.0 63 2110.0 64 2121.0 65 2085.0 66 1969.0 67 1899.0 68 1836.5 69 1704.0 70 1541.0 71 1448.0 72 1389.0 73 1232.5 74 1035.0 75 935.0 76 807.5 77 645.5 78 525.0 79 439.0 80 367.5 81 245.0 82 156.5 83 119.0 84 90.0 85 60.5 86 49.5 87 39.0 88 24.5 89 8.0 90 5.5 91 3.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 7.671064743786438E-4 9 7.671064743786438E-4 10-11 7.671064743786438E-4 12-13 0.0011506597115679656 14-15 7.671064743786438E-4 16-17 0.0015342129487572877 18-19 0.0011506597115679656 20-21 3.835532371893219E-4 22-23 7.671064743786438E-4 24-25 7.671064743786438E-4 26-27 7.671064743786438E-4 28-29 7.671064743786438E-4 30-31 0.0011506597115679656 32-33 7.671064743786438E-4 34-35 7.671064743786438E-4 36-37 7.671064743786438E-4 38-39 0.0011506597115679656 40-41 0.0011506597115679656 42-43 7.671064743786438E-4 44-45 7.671064743786438E-4 46-47 7.671064743786438E-4 48-49 7.671064743786438E-4 50-51 3.835532371893219E-4 52-53 7.671064743786438E-4 54-55 7.671064743786438E-4 56-57 7.671064743786438E-4 58-59 0.0011506597115679656 60-61 0.0011506597115679656 62-63 0.0011506597115679656 64-65 7.671064743786438E-4 66-67 0.0015342129487572877 68-69 0.01841055538508745 70-71 0.0011506597115679656 72-73 7.671064743786438E-4 74-75 7.671064743786438E-4 76 0.0015342129487572877 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 130360.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 94.99378052414289 #Duplication Level Percentage of deduplicated Percentage of total 1 96.37224913214843 91.54764282677328 2 2.6920179058805402 5.114499162365576 3 0.5817652484889925 1.657922409946104 4 0.18813825189692548 0.714878552355698 5 0.08193109306887304 0.3891472136543825 6 0.04594605517653701 0.26187536888340696 7 0.010986327753674405 0.07305429651791924 8 0.011984906764255608 0.09107932822128102 9 0.004993695473476279 0.04269330106306304 >10 0.009987383348324122 0.10720754021931753 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0023013194231359313 0.0 2 0.0 0.0 0.0 0.0023013194231359313 0.0 3 0.0 0.0 0.0 0.0023013194231359313 0.0 4 0.0 0.0 0.0 0.010739490641301013 0.0 5 0.0 0.0 0.0 0.010739490641301013 0.0 6 0.0 0.0 0.0 0.010739490641301013 0.0 7 0.0 0.0 0.0 0.011506597115679657 0.0 8 0.0 0.0 0.0 0.011506597115679657 0.0 9 0.0 0.0 0.0 0.013040810064436944 0.0 10 0.0 0.0 0.0 0.013807916538815588 0.0 11 0.0 0.0 0.0 0.014575023013194232 0.0 12 0.0 0.0 0.0 0.014575023013194232 0.0 13 0.0 0.0 0.0 0.014575023013194232 0.0 14 0.0 0.0 0.0 0.016109235961951518 0.0 15 0.0 0.0 0.0 0.016109235961951518 0.0 16 0.0 0.0 0.0 0.016876342436330162 0.0 17 0.0 0.0 0.0 0.01841055538508745 0.0 18 0.0 0.0 0.0 0.01841055538508745 0.0 19 0.0 0.0 0.0 0.019944768333844738 0.0 20 0.0 0.0 0.0 0.020711874808223382 0.0 21 0.0 0.0 0.0 0.0245474071801166 0.0 22 0.0 0.0 0.0 0.029917152500767107 0.0 23 0.0 0.0 0.0 0.033752684872660324 0.0 24 0.0 0.0 0.0 0.03528689782141761 0.0 25 0.0 0.0 0.0 0.039889536667689476 0.0 26 0.0 0.0 0.0 0.0437250690395827 0.0 27 0.0 0.0 0.0 0.09205277692543726 0.0 28 0.0 0.0 0.0 0.12887388769561214 0.0 29 0.0 0.0 0.0 0.15188708192697145 0.0 30 0.0 0.0 0.0 0.18027002147898127 0.0 31 0.0 0.0 0.0 0.1963792574409328 0.0 32 0.0 0.0 0.0 0.2278306228904572 7.671064743786437E-4 33 0.0 0.0 0.0 0.2600490948143602 7.671064743786437E-4 34 0.0 0.0 0.0 0.3083768027002148 7.671064743786437E-4 35 0.0 0.0 0.0 0.41807302853636086 7.671064743786437E-4 36 0.0 0.0 0.0 0.5239337220006137 7.671064743786437E-4 37 0.0 0.0 0.0 0.8307763117520712 7.671064743786437E-4 38 0.0 0.0 0.0 1.1422215403498006 7.671064743786437E-4 39 0.0 0.0 0.0 1.580239337220006 7.671064743786437E-4 40 0.0 0.0 0.0 2.1095428045412703 7.671064743786437E-4 41 0.0 0.0 0.0 2.9057993249463023 7.671064743786437E-4 42 7.671064743786437E-4 0.0 0.0 3.751150659711568 7.671064743786437E-4 43 7.671064743786437E-4 0.0 0.0 4.685486345504756 7.671064743786437E-4 44 7.671064743786437E-4 0.0 0.0 5.477907333537895 7.671064743786437E-4 45 7.671064743786437E-4 0.0 0.0 5.983430500153421 7.671064743786437E-4 46 7.671064743786437E-4 0.0 0.0 6.567198527155569 7.671064743786437E-4 47 7.671064743786437E-4 0.0 0.0 7.310524700828475 7.671064743786437E-4 48 7.671064743786437E-4 0.0 0.0 7.814513654495244 7.671064743786437E-4 49 7.671064743786437E-4 0.0 0.0 8.273243326173674 7.671064743786437E-4 50 7.671064743786437E-4 0.0 0.0 8.968241791960724 7.671064743786437E-4 51 7.671064743786437E-4 0.0 0.0 9.83583921448297 7.671064743786437E-4 52 7.671064743786437E-4 0.0 0.0 10.61598649892605 7.671064743786437E-4 53 7.671064743786437E-4 0.0 0.0 11.677661859466093 7.671064743786437E-4 54 7.671064743786437E-4 0.0 0.0 12.549094814360233 7.671064743786437E-4 55 7.671064743786437E-4 0.0 0.0 13.159711567965633 7.671064743786437E-4 56 7.671064743786437E-4 0.0 0.0 13.751917766185947 7.671064743786437E-4 57 7.671064743786437E-4 0.0 0.0 14.231359312672598 7.671064743786437E-4 58 7.671064743786437E-4 0.0 0.0 14.650199447683338 7.671064743786437E-4 59 7.671064743786437E-4 0.0 0.0 15.087450138079165 7.671064743786437E-4 60 7.671064743786437E-4 0.0 0.0 15.40196379257441 7.671064743786437E-4 61 7.671064743786437E-4 0.0 0.0 15.73565510892912 7.671064743786437E-4 62 7.671064743786437E-4 0.0 0.0 15.998772629640994 7.671064743786437E-4 63 7.671064743786437E-4 0.0 0.0 16.3577784596502 7.671064743786437E-4 64 7.671064743786437E-4 0.0 0.0 16.712181650813132 7.671064743786437E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGATCTT 15 0.0022205184 69.99962 44 GCTCTAA 20 0.006938438 52.499714 13 GTATGCC 20 0.006938438 52.499714 11 TCTAAGG 20 0.006938438 52.499714 3 CGGTCCA 20 0.006938438 52.499714 52 TATACGC 20 0.006938438 52.499714 52 GATCTCG 50 6.145092E-8 48.999733 41 GTAGCTC 30 5.8602943E-4 46.66641 38 CTCGGTG 90 0.0 46.66641 44 TCTCGGT 85 1.8189894E-12 45.29387 43 ATCTCGG 55 1.3007048E-7 44.54521 42 GTGTTCG 50 3.4572422E-6 41.99977 48 CAGCTGA 60 2.5763256E-7 40.833107 55 ACTTGGA 35 0.001251712 39.99978 17 CCAGAGT 35 0.001251712 39.99978 28 TTAGTCT 35 0.001251712 39.99978 38 TAGATCT 70 1.9059371E-8 39.99978 39 GAGTCTA 45 9.1573726E-5 38.888676 34 TCTTACG 45 9.1573726E-5 38.888676 54 ACCAGAG 45 9.1573726E-5 38.888676 27 >>END_MODULE