##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779752_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 122432 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.440072856769472 33.0 23.0 34.0 12.0 34.0 2 27.271865198640878 32.0 23.0 34.0 12.0 34.0 3 26.2458180867747 32.0 21.0 34.0 11.0 34.0 4 28.206473797699946 33.0 23.0 34.0 12.0 34.0 5 27.834316191845268 33.0 23.0 34.0 11.0 34.0 6 30.028456612650288 35.0 25.0 38.0 11.0 38.0 7 30.97225398588604 36.0 26.0 38.0 12.0 38.0 8 30.2252924072138 36.0 25.0 38.0 11.0 38.0 9 31.66537343178254 37.0 27.0 38.0 12.0 38.0 10-11 31.258175967067434 37.0 27.0 38.0 11.0 38.0 12-13 30.512676424464193 35.5 25.5 38.0 11.0 38.0 14-15 30.337027901202298 35.0 25.0 38.0 11.0 38.0 16-17 30.112944328280186 35.5 24.0 38.0 11.0 38.0 18-19 30.707829652378464 36.0 26.0 38.0 11.5 38.0 20-21 29.595885879508625 35.0 23.5 38.0 11.0 38.0 22-23 29.591226150026138 35.5 24.0 38.0 11.0 38.0 24-25 30.607819034239416 36.0 25.0 38.0 11.0 38.0 26-27 29.28626094485102 34.5 22.0 38.0 11.0 38.0 28-29 31.137521236278097 37.0 26.5 38.0 11.0 38.0 30-31 31.61939688970204 37.0 27.0 38.0 11.0 38.0 32-33 31.740402835859904 37.0 27.0 38.0 11.0 38.0 34-35 31.754034892838476 37.0 27.0 38.0 11.0 38.0 36-37 29.930692139309983 35.0 24.0 38.0 11.0 38.0 38-39 28.420792766596968 34.0 21.0 37.5 11.0 38.0 40-41 29.304850855985364 34.0 22.5 37.5 11.0 38.0 42-43 30.280833442237324 35.5 25.0 38.0 11.0 38.0 44-45 31.830481410088865 37.0 27.0 38.0 11.0 38.0 46-47 30.562414238107685 35.5 26.5 38.0 11.0 38.0 48-49 29.952030514898066 35.5 23.5 38.0 11.0 38.0 50-51 27.989100071876635 33.5 21.0 37.5 11.0 38.0 52-53 30.938815015682174 36.5 26.0 38.0 11.0 38.0 54-55 30.108476542080503 35.5 24.0 38.0 11.0 38.0 56-57 30.538837885520124 36.0 25.0 38.0 11.0 38.0 58-59 31.525054724255096 37.0 27.0 38.0 11.0 38.0 60-61 32.0001919432828 37.0 30.5 38.0 11.0 38.0 62-63 31.932934200209097 37.0 29.0 38.0 11.0 38.0 64-65 31.682799431521172 37.0 29.0 38.0 11.0 38.0 66-67 29.772865754051228 35.5 23.5 38.0 11.0 38.0 68-69 29.828468047569263 35.0 23.5 38.0 11.0 38.0 70-71 29.469436095138526 35.0 23.0 38.0 11.0 38.0 72-73 28.385769243335076 34.0 21.5 37.5 11.0 38.0 74-75 30.192498693152118 35.5 24.0 38.0 11.0 38.0 76 30.55866930214323 36.0 25.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 3.0 4 0.0 5 2.0 6 1.0 7 0.0 8 1.0 9 1.0 10 0.0 11 11.0 12 46.0 13 262.0 14 691.0 15 1278.0 16 2055.0 17 3328.0 18 4339.0 19 4800.0 20 4086.0 21 3379.0 22 2646.0 23 2172.0 24 2064.0 25 2108.0 26 2202.0 27 2472.0 28 2837.0 29 3417.0 30 4185.0 31 5095.0 32 6659.0 33 8768.0 34 11841.0 35 15238.0 36 17124.0 37 9320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.05674986931521 18.54988891792995 12.599647151071617 32.79371406168322 2 19.066093831677993 15.879835337166753 42.26264375326712 22.791427077888134 3 19.02867737746159 18.15798286381717 37.99282861366811 24.820511145053132 4 14.204735728696164 19.604511929168268 31.99679819653519 34.19395414560038 5 13.961219289074753 28.019635389440666 39.49457658128594 18.524568740198642 6 26.147575797177208 33.95599189754313 16.6288225300575 23.267609775222166 7 25.846184004181914 24.48869576581286 21.411069001568215 28.25405122843701 8 21.815449206465896 32.38828036299182 18.662549927712025 27.133720502830254 9 22.07800694302634 15.92648560343067 20.211558096793954 41.78394935674903 10-11 24.319368092596978 23.28402342697042 27.305326613463155 25.09128186696944 12-13 23.19193948898909 18.738564333790762 29.95654446840489 28.112951708815263 14-15 23.93414770615599 22.065664424486727 23.60578474255772 30.394403126799563 16-17 25.319898873972303 21.784572154400983 25.742210314364716 27.153318657262 18-19 21.935649872574007 21.452492975233614 28.250588119976477 28.36126903221591 20-21 25.05319561692621 21.20309902757187 26.853065742022697 26.890639613479216 22-23 26.28539455251647 20.25509808165916 26.70524858380948 26.75425878201489 24-25 22.315929622792545 24.09741394801758 23.72535245781125 29.86130397137863 26-27 24.134579256040382 23.477039191021515 26.59320732524137 25.795174227696734 28-29 23.26598625286399 24.12691800319378 25.81610857215204 26.790987171790192 30-31 22.75185218463851 23.868880847553157 26.09885397351805 27.280412994290288 32-33 22.86819330940041 23.689100718396087 26.30865301754945 27.134052954654052 34-35 23.045632205971845 23.633749780476947 26.167964745618725 27.15265326793248 36-37 25.239744490369375 20.445263106304424 30.084053519792192 24.230938883534005 38-39 24.40809491719251 19.576058322612262 33.80710245257204 22.208744307623192 40-41 23.626279375607524 22.994453656584138 25.706362366548767 27.672904601259567 42-43 20.344534657670756 23.691862839592897 27.3124172969794 28.651185205756946 44-45 20.581099956707483 21.525775385344257 29.855909428783807 28.037215229164453 46-47 23.716034911597855 20.581015899725134 29.442468153581626 26.260481035095385 48-49 23.735521393213638 21.20493048635049 30.10284099263204 24.956707127803828 50-51 26.99530324688585 19.753318358178475 30.44639575250153 22.804982642434144 52-53 19.53620205188525 23.284241651963665 29.56568973403908 27.613866562112005 54-55 22.72712420970087 21.862900459067813 28.142817467448662 27.267157863782653 56-57 22.833163161119053 22.006534613028382 27.642638350010213 27.517663875842352 58-59 20.010373782918382 23.482323727373718 28.490737110370517 28.016565379337383 60-61 19.892176683207744 22.388449835610285 28.388980783761152 29.330392697420816 62-63 19.988074136395937 23.488641840177092 28.101337167035606 28.421946856391365 64-65 20.12497447416786 24.257300387992647 27.21748008985093 28.400245047988566 66-67 18.844983561028407 26.339520921399252 23.110539320794786 31.70495619677755 68-69 19.341383902674174 26.411232668534968 23.451096059415164 30.7962873693757 70-71 18.915386594674956 27.265635529706795 22.818704230874477 31.000273644743775 72-73 18.11327844213553 27.348804156047834 22.111269032215905 32.42664836960073 74-75 19.708881800619974 26.62416428084248 25.724017659863836 27.94293625867371 76 20.00833169966673 25.247500490099977 27.3157224073711 27.428445402862184 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 0.0 3 1.0 4 2.0 5 1.5 6 0.5 7 0.5 8 1.0 9 0.5 10 0.0 11 1.0 12 2.0 13 1.0 14 0.5 15 2.0 16 3.0 17 3.0 18 7.0 19 12.5 20 18.5 21 23.0 22 38.5 23 64.0 24 108.5 25 143.0 26 188.5 27 293.5 28 433.0 29 513.0 30 623.0 31 862.0 32 1190.5 33 1390.0 34 1624.0 35 2157.0 36 2739.0 37 3022.0 38 3434.0 39 4307.0 40 5198.5 41 5957.5 42 6286.0 43 6518.0 44 7002.5 45 7297.0 46 7339.0 47 7291.0 48 7002.5 49 6386.5 50 6011.0 51 5748.0 52 5107.0 53 4433.0 54 4137.0 55 3784.5 56 3322.0 57 3018.0 58 2824.0 59 2666.5 60 2396.5 61 2168.0 62 2052.0 63 2008.0 64 1930.5 65 1866.5 66 1759.5 67 1683.0 68 1647.5 69 1559.0 70 1466.0 71 1426.0 72 1345.5 73 1215.0 74 1054.0 75 943.0 76 872.0 77 713.0 78 536.0 79 447.0 80 390.0 81 274.0 82 165.5 83 116.0 84 97.0 85 60.5 86 32.5 87 22.0 88 16.5 89 6.5 90 3.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 8.167799268165185E-4 4 8.167799268165185E-4 5 0.0 6 0.0 7 0.0 8 0.004083899634082593 9 0.00571745948771563 10-11 0.0073510193413486675 12-13 0.006534239414532148 14-15 0.0053090695243073706 16-17 0.008576189231573446 18-19 0.006534239414532148 20-21 0.0053090695243073706 22-23 0.006942629377940408 24-25 0.004900679560899112 26-27 0.004900679560899112 28-29 0.0053090695243073706 30-31 0.0073510193413486675 32-33 0.0053090695243073706 34-35 0.006125849451123888 36-37 0.008167799268165186 38-39 0.0077594093047569255 40-41 0.0073510193413486675 42-43 0.004900679560899112 44-45 0.0073510193413486675 46-47 0.006942629377940408 48-49 0.008167799268165186 50-51 0.00571745948771563 52-53 0.006534239414532148 54-55 0.008167799268165186 56-57 0.00571745948771563 58-59 0.006534239414532148 60-61 0.0077594093047569255 62-63 0.0073510193413486675 64-65 0.00571745948771563 66-67 0.0077594093047569255 68-69 0.03185441714584423 70-71 0.008576189231573446 72-73 0.006534239414532148 74-75 0.006125849451123888 76 0.006534239414532148 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 122432.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 94.1418332179058 #Duplication Level Percentage of deduplicated Percentage of total 1 95.96729897235497 90.34537454228344 2 2.8731618640690066 5.409694500304636 3 0.6527394131618665 1.8435025490591443 4 0.2539576018577543 0.9563213679404813 5 0.12492634039887977 0.5880397351177333 6 0.0589615151645668 0.3330447076138603 7 0.03597617920868153 0.23708044240168305 8 0.014990053619943496 0.11289529022529485 9 0.005996020191396664 0.05080286995466942 >10 0.011992039972921371 0.12324399509904961 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 8.167799268165185E-4 0.0 4 0.0 0.0 0.0 8.167799268165185E-4 0.0 5 0.0 0.0 0.0 0.003267119707266074 0.0 6 0.0 0.0 0.0 0.003267119707266074 0.0 7 0.0 0.0 0.0 0.004083899634082593 0.0 8 0.0 0.0 0.0 0.004900679560899112 0.0 9 0.0 0.0 0.0 0.006534239414532148 0.0 10 0.0 0.0 0.0 0.009801359121798223 0.0 11 0.0 0.0 0.0 0.009801359121798223 0.0 12 0.0 0.0 0.0 0.012251698902247778 0.0 13 0.0 0.0 0.0 0.013068478829064296 0.0 14 0.0 0.0 0.0 0.013068478829064296 0.0 15 0.0 0.0 0.0 0.013885258755880816 0.0 16 0.0 0.0 0.0 0.013885258755880816 0.0 17 0.0 0.0 0.0 0.014702038682697333 0.0 18 0.0 0.0 0.0 0.016335598536330372 0.0 19 0.0 0.0 0.0 0.018785938316779927 0.0 20 0.0 0.0 0.0 0.019602718243596447 0.0 21 0.0 0.0 0.0 0.025320177731312076 0.0 22 0.0 0.0 0.0 0.032671197072660745 0.0 23 0.0 0.0 0.0 0.03348797699947726 0.0 24 0.0 0.0 0.0 0.0351215368531103 0.0 25 0.0 0.0 0.0 0.037571876633559854 0.0 26 0.0 0.0 0.0 0.04002221641400941 0.0 27 0.0 0.0 0.0 0.05799137480397282 0.0 28 0.0 0.0 0.0 0.0963800313643492 0.0 29 0.0 0.0 0.0 0.11761630946157867 0.0 30 0.0 0.0 0.0 0.15273784631468898 0.0 31 0.0 0.0 0.0 0.17397412441191845 0.0 32 0.0 0.0 0.0 0.22379769994772608 0.0 33 0.0 0.0 0.0 0.27852195504443283 0.0 34 0.0 0.0 0.0 0.3634670674333508 0.0 35 0.0 0.0 0.0 0.5006860951385259 0.0 36 0.0 0.0 0.0 0.6134017250392054 0.0 37 0.0 0.0 0.0 0.9074424986931521 0.0 38 0.0 0.0 0.0 1.2268034500784109 0.0 39 0.0 0.0 0.0 1.6025222164140094 0.0 40 0.0 0.0 0.0 1.9937598013591218 0.0 41 0.0 0.0 0.0 2.433187401986409 0.0 42 0.0 0.0 0.0 2.945308416100366 0.0 43 0.0 0.0 0.0 3.4794824882383693 0.0 44 0.0 0.0 0.0 4.02835859905907 0.0 45 0.0 0.0 0.0 4.380390747516989 0.0 46 0.0 0.0 0.0 4.819818348144276 0.0 47 0.0 0.0 0.0 5.335206481965499 0.0 48 0.0 0.0 0.0 5.672536591740721 0.0 49 0.0 0.0 0.0 6.021301620491375 0.0 50 0.0 0.0 0.0 6.532605854678516 0.0 51 0.0 0.0 0.0 7.073314166231051 0.0 52 0.0 0.0 0.0 7.55929822268688 0.0 53 0.0 0.0 0.0 8.176783847360166 0.0 54 0.0 0.0 0.0 8.77221641400941 0.0 55 0.0 0.0 0.0 9.178156037637219 0.0 56 0.0 0.0 0.0 9.594713800313643 0.0 57 0.0 0.0 0.0 9.905906952430737 0.0 58 0.0 0.0 0.0 10.213016204913748 0.0 59 0.0 0.0 0.0 10.58546785154208 0.0 60 0.0 0.0 0.0 10.837852848928385 0.0 61 0.0 0.0 0.0 11.086970726607422 0.0 62 0.0 0.0 0.0 11.286265028750654 0.0 63 0.0 0.0 0.0 11.48882645060115 0.0 64 0.0 0.0 0.0 11.737944328280188 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGATCTC 135 0.0 57.03005 40 GTAGATC 95 0.0 55.256386 38 CTCGGTG 130 0.0 53.83955 44 TAGATCT 130 0.0 53.83955 39 ACTCTGC 60 8.367351E-11 52.49357 15 GCGCACA 20 0.0069406442 52.493565 36 ACGCTAA 20 0.0069406442 52.493565 23 TATCGTA 20 0.0069406442 52.493565 50 GTGAAAC 20 0.0069406442 52.493565 48 ATCTCGT 55 2.2610038E-9 50.90285 42 GATCTCG 145 0.0 50.68344 41 TCTCGGT 150 0.0 48.993996 43 TTAGATC 50 6.146547E-8 48.99399 38 GATCTCT 50 6.146547E-8 48.99399 41 CGGTGGT 110 0.0 47.721424 46 TCGGTGG 140 0.0 47.49418 45 ATCTCGG 135 0.0 46.66095 42 TAGATCC 30 5.8622647E-4 46.66095 39 TGTCGAT 45 1.6747981E-6 46.66095 37 TGTCCGC 30 5.8622647E-4 46.66095 46 >>END_MODULE