##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779749_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 146890 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.774184764109197 33.0 23.0 34.0 12.0 34.0 2 26.81878957042685 32.0 21.0 34.0 12.0 34.0 3 25.934297773844374 31.0 21.0 34.0 11.0 34.0 4 27.617074000953092 32.0 23.0 34.0 12.0 34.0 5 27.42018517257812 33.0 23.0 34.0 11.0 34.0 6 29.32320784260331 34.0 21.0 38.0 11.0 38.0 7 30.397957655388385 36.0 26.0 38.0 12.0 38.0 8 29.582919191231532 35.0 22.0 38.0 11.0 38.0 9 31.0168289195997 37.0 26.0 38.0 12.0 38.0 10-11 30.572921914357682 37.0 26.0 38.0 11.0 38.0 12-13 29.96319354619103 35.5 24.0 38.0 11.0 38.0 14-15 29.62592756484444 35.0 23.0 38.0 11.0 38.0 16-17 29.424079242970933 35.5 23.5 38.0 11.0 38.0 18-19 29.97369460140241 35.5 24.0 38.0 11.0 38.0 20-21 28.949002655047995 34.0 22.5 37.5 11.0 38.0 22-23 28.981043638096537 33.5 23.5 37.5 11.0 38.0 24-25 29.831482742188033 35.0 24.0 38.0 11.0 38.0 26-27 28.60367962420859 34.0 21.5 38.0 11.0 38.0 28-29 30.31624004357002 36.5 24.0 38.0 11.0 38.0 30-31 30.749060521478658 37.0 25.5 38.0 11.0 38.0 32-33 30.855078630267545 37.0 26.0 38.0 11.0 38.0 34-35 30.92730614745728 37.0 26.0 38.0 11.0 38.0 36-37 29.23422969569065 35.0 22.5 38.0 11.0 38.0 38-39 27.95812512764654 33.5 21.0 37.0 11.0 38.0 40-41 28.63911089931241 34.0 21.5 37.5 11.0 38.0 42-43 29.516498740554155 35.0 23.5 38.0 11.0 38.0 44-45 30.90708012798693 37.0 26.0 38.0 11.0 38.0 46-47 29.753873646946694 35.5 23.5 38.0 11.0 38.0 48-49 29.171461637960377 35.0 22.5 38.0 11.0 38.0 50-51 27.38892368438968 31.5 21.0 37.0 11.0 38.0 52-53 30.07542378650691 35.5 24.0 38.0 11.0 38.0 54-55 29.33943767445027 35.0 22.5 38.0 11.0 38.0 56-57 29.732874940431614 35.5 23.0 38.0 11.0 38.0 58-59 30.627986928994485 37.0 25.0 38.0 11.0 38.0 60-61 31.095605555177343 37.0 26.0 38.0 11.0 38.0 62-63 31.008805909183742 37.0 25.5 38.0 11.0 38.0 64-65 30.754111920484718 37.0 25.0 38.0 11.0 38.0 66-67 29.071379944175916 34.5 21.5 38.0 11.0 38.0 68-69 29.081561032064812 34.5 22.0 38.0 11.0 38.0 70-71 28.769337599564302 34.0 21.5 38.0 11.0 38.0 72-73 27.779375723330382 32.5 21.0 37.0 11.0 38.0 74-75 29.30604193614269 35.0 22.5 37.5 11.0 38.0 76 29.59464905711757 36.0 23.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 0.0 5 0.0 6 0.0 7 2.0 8 1.0 9 0.0 10 0.0 11 15.0 12 83.0 13 427.0 14 1153.0 15 2010.0 16 3303.0 17 5080.0 18 6795.0 19 6817.0 20 5968.0 21 4520.0 22 3503.0 23 2740.0 24 2482.0 25 2432.0 26 2416.0 27 2717.0 28 3098.0 29 3636.0 30 4481.0 31 5633.0 32 7096.0 33 9423.0 34 13208.0 35 17205.0 36 19387.0 37 11256.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.80767921573967 18.17074000953094 14.185444890734564 32.83613588399483 2 18.169378446456534 16.305398597590035 42.39090475866295 23.13431819729049 3 18.507046088910066 17.366056232554975 39.46422493021989 24.662672748315064 4 14.28289388585939 20.232965028014352 31.206557332407463 34.277583753718794 5 14.06630812172374 27.5580366260467 40.37851453468582 17.99714071754374 6 26.189665736265233 33.10504459119068 17.400776090952412 23.304513581591667 7 24.74436653277963 24.560555517734358 20.513309279052354 30.181768670433655 8 21.57606290635531 32.61190727439834 18.71940633829186 27.092623480954487 9 21.483619727131614 14.830069987200783 20.239781051714278 43.44652923395332 10-11 24.019798070573177 22.90836924627084 27.548797342102215 25.523035341053763 12-13 22.877917268048257 18.19190653849296 30.048882111053622 28.881294082405162 14-15 24.249077515896683 22.115790476968535 23.05155018177362 30.58358182536117 16-17 26.42660430219535 20.59729640485163 24.907661774868345 28.06843751808468 18-19 21.76608151302554 20.51373698382062 28.04005868556587 29.680122817587968 20-21 25.959764441569938 20.395207134833374 25.788201654355447 27.856826769241245 22-23 27.127125423382637 19.191871053393015 25.55954589552874 28.121457627695605 24-25 22.191510365251727 23.704939238179527 22.925758246247064 31.177792150321682 26-27 25.03940117029135 22.836680021649368 25.547616697245836 26.576302110813447 28-29 23.13018259058045 23.348719415056575 24.968342796454394 28.55275519790858 30-31 22.60967838566488 23.051523651316685 25.803014623784755 28.535783339233685 32-33 22.98483177430116 22.72068134471631 25.75160328417957 28.542883596802966 34-35 23.444792031888785 22.510731147730713 25.49673044650425 28.547746373876247 36-37 25.56252255196313 19.670417951703058 29.684510801113813 25.08254869522 38-39 25.40431977941552 18.070907017514 33.72219290929825 22.80258029377223 40-41 23.72909050060252 22.69187040025054 25.040338228385856 28.53870087076108 42-43 20.237803466633988 23.250343804038508 26.997807823754478 29.514044905573027 44-45 20.459953228557133 20.48922793078916 29.808454942488826 29.242363898164886 46-47 24.608707492255846 19.624536201790516 28.479763079960513 27.286993225993122 48-49 24.154681463074226 20.184501216959134 29.844603679812092 25.816213640154544 50-51 28.49619939476255 18.513525933641738 29.288658776113202 23.701615895482504 52-53 19.222913631350337 22.14022140221402 29.57680314810528 29.06006181833036 54-55 23.283917416982963 20.759450581246917 27.546508263407826 28.410123738362298 56-57 23.463514097715567 21.200186539855874 26.623118006882912 28.713181355545647 58-59 19.770497606938857 22.906326804327254 28.296331093455336 29.026844495278553 60-61 19.72113859330215 21.51065814287562 28.000857825616304 30.76734543820592 62-63 19.475497337999208 22.961629062785093 27.626938631009928 29.935934968205768 64-65 20.05221807684976 23.678889463794558 26.86337518041448 29.405517278941208 66-67 18.53792211328976 27.023760893246184 22.139161220043572 32.29915577342048 68-69 18.942006829935956 26.888702005740416 22.636164613032715 31.533126551290913 70-71 18.62304903579392 27.744966214491175 22.062192568890097 31.569792180824805 72-73 17.727193815548954 28.729716205590105 21.36134173449207 32.181748244368876 74-75 19.28787827211764 26.13881608060728 25.49205160499711 29.08125404227797 76 20.29846884935629 24.90621787409026 27.13656447648809 27.658748800065357 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 0.5 3 1.0 4 2.0 5 1.0 6 0.0 7 0.0 8 0.0 9 0.0 10 1.5 11 2.0 12 1.0 13 0.5 14 0.5 15 1.5 16 5.0 17 8.0 18 9.5 19 18.5 20 34.0 21 42.0 22 59.5 23 90.0 24 140.5 25 178.0 26 224.5 27 361.5 28 564.5 29 677.0 30 777.0 31 1051.5 32 1442.0 33 1658.0 34 1932.0 35 2544.0 36 3237.5 37 3593.0 38 3971.5 39 4809.0 40 5631.0 41 6368.5 42 6743.0 43 7087.5 44 7620.5 45 7821.0 46 7833.0 47 7826.5 48 7599.0 49 7152.0 50 6926.0 51 6593.5 52 5833.5 53 5256.0 54 5106.0 55 4895.5 56 4379.0 57 3952.0 58 3831.0 59 3678.0 60 3375.0 61 3153.5 62 3082.0 63 2985.5 64 2802.0 65 2629.0 66 2455.0 67 2367.0 68 2324.5 69 2213.5 70 2063.5 71 1982.0 72 1952.5 73 1784.5 74 1518.0 75 1390.0 76 1250.5 77 1005.0 78 785.0 79 671.0 80 579.0 81 398.5 82 272.0 83 234.0 84 177.0 85 94.0 86 45.0 87 22.0 88 20.5 89 13.0 90 7.0 91 4.5 92 2.0 93 2.5 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 6.80781537204711E-4 5 0.0 6 0.0 7 0.0 8 0.0034039076860235555 9 0.004084689223228266 10-11 0.004765470760432977 12-13 0.004084689223228266 14-15 0.002723126148818844 16-17 0.007828987677854176 18-19 0.0037442984546259108 20-21 0.0034039076860235555 22-23 0.005105861529035333 24-25 0.0034039076860235555 26-27 0.0023827353802164885 28-29 0.002723126148818844 30-31 0.004084689223228266 32-33 0.002723126148818844 34-35 0.0030635169174211994 36-37 0.004765470760432977 38-39 0.005105861529035333 40-41 0.004765470760432977 42-43 0.002723126148818844 44-45 0.0037442984546259108 46-47 0.0034039076860235555 48-49 0.005105861529035333 50-51 0.0037442984546259108 52-53 0.005446252297637688 54-55 0.005105861529035333 56-57 0.0030635169174211994 58-59 0.004765470760432977 60-61 0.004765470760432977 62-63 0.005446252297637688 64-65 0.004084689223228266 66-67 0.006807815372047111 68-69 0.024848526107971954 70-71 0.005105861529035333 72-73 0.0037442984546259108 74-75 0.0034039076860235555 76 0.004765470760432977 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 146890.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 94.37939073718353 #Duplication Level Percentage of deduplicated Percentage of total 1 95.84471385628585 90.4576569913595 2 3.101116264068793 5.853629272159668 3 0.6814543182295324 1.9294573010917815 4 0.1960085186697223 0.7399665828538502 5 0.08095467805335733 0.38202265960003545 6 0.04689341890451214 0.2655463383474828 7 0.02094163223284757 0.13835209438248225 8 0.01794720669867225 0.13550771469239886 9 0.0039880837917119615 0.033875362662355045 >10 0.005982023065002283 0.06398568285044835 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 6.80781537204711E-4 0.0 4 0.0 0.0 0.0 6.80781537204711E-4 0.0 5 0.0 0.0 0.0 6.80781537204711E-4 0.0 6 0.0 0.0 0.0 0.001361563074409422 0.0 7 0.0 0.0 0.0 0.001361563074409422 0.0 8 0.0 0.0 0.0 0.001361563074409422 0.0 9 0.0 0.0 0.0 0.003403907686023555 0.0 10 0.0 0.0 0.0 0.010892504595275377 0.0 11 0.0 0.0 0.0 0.010892504595275377 0.0 12 0.0 0.0 6.80781537204711E-4 0.010892504595275377 0.0 13 0.0 0.0 6.80781537204711E-4 0.012934849206889509 0.0 14 0.0 0.0 6.80781537204711E-4 0.017700319967322485 0.0 15 0.0 0.0 6.80781537204711E-4 0.019061883041731908 0.0 16 0.0 0.0 6.80781537204711E-4 0.019061883041731908 0.0 17 0.0 0.0 6.80781537204711E-4 0.02110422765334604 0.0 18 0.0 0.0 6.80781537204711E-4 0.022465790727755463 0.0 19 0.0 0.0 6.80781537204711E-4 0.03267751378582613 0.0 20 0.0 0.0 6.80781537204711E-4 0.03540063993464497 0.0 21 0.0 0.0 6.80781537204711E-4 0.038804547620668525 0.0 22 0.0 0.0 6.80781537204711E-4 0.059908775274014565 0.0 23 0.0 0.0 6.80781537204711E-4 0.0619511198856287 0.0 24 0.0 0.0 6.80781537204711E-4 0.06943971679488052 0.0 25 0.0 0.0 6.80781537204711E-4 0.07352440601810879 0.0 26 0.0 0.0 6.80781537204711E-4 0.07828987677854177 0.0 27 0.0 0.0 6.80781537204711E-4 0.10960582748995847 0.0 28 0.0 0.0 6.80781537204711E-4 0.14568724896180815 0.0 29 0.0 0.0 6.80781537204711E-4 0.16883382122676832 0.0 30 0.0 0.0 6.80781537204711E-4 0.2042344611614133 0.0 31 0.0 0.0 6.80781537204711E-4 0.21785009190550753 0.0 32 0.0 0.0 6.80781537204711E-4 0.26958948873306554 0.0 33 0.0 0.0 6.80781537204711E-4 0.3281367009326707 0.0 34 0.0 0.0 6.80781537204711E-4 0.4043842330995983 0.0 35 0.0 0.0 6.80781537204711E-4 0.55347538974743 0.0 36 0.0 0.0 6.80781537204711E-4 0.6978010756348287 0.0 37 0.0 0.0 6.80781537204711E-4 1.0606576349649397 0.0 38 0.0 0.0 6.80781537204711E-4 1.4493838927088298 0.0 39 0.0 0.0 6.80781537204711E-4 1.8449179658247667 0.0 40 0.0 0.0 6.80781537204711E-4 2.3166995711076317 0.0 41 0.0 0.0 6.80781537204711E-4 2.819116345564708 0.0 42 0.0 0.0 6.80781537204711E-4 3.3092790523521 0.0 43 0.0 0.0 6.80781537204711E-4 3.8811355436040573 0.0 44 0.0 0.0 6.80781537204711E-4 4.407379671863299 0.0 45 0.0 0.0 6.80781537204711E-4 4.823337191095377 0.0 46 0.0 0.0 6.80781537204711E-4 5.286268636394581 0.0 47 0.0 0.0 6.80781537204711E-4 5.845190278439649 0.0 48 0.0 0.0 6.80781537204711E-4 6.210769963918579 0.0 49 0.0 0.0 6.80781537204711E-4 6.566818707876642 0.0 50 0.0 0.0 6.80781537204711E-4 7.0535775069780104 0.0 51 0.0 0.0 6.80781537204711E-4 7.630880250527606 0.0 52 0.0 0.0 6.80781537204711E-4 8.109469671182518 6.80781537204711E-4 53 0.0 0.0 6.80781537204711E-4 8.613928790251208 6.80781537204711E-4 54 0.0 0.0 6.80781537204711E-4 9.170808087684662 6.80781537204711E-4 55 0.0 0.0 6.80781537204711E-4 9.502348696303356 6.80781537204711E-4 56 0.0 0.0 6.80781537204711E-4 9.865205255633468 6.80781537204711E-4 57 0.0 0.0 6.80781537204711E-4 10.172918510449996 6.80781537204711E-4 58 0.0 0.0 6.80781537204711E-4 10.483354891415345 6.80781537204711E-4 59 0.0 0.0 6.80781537204711E-4 10.843488324596636 6.80781537204711E-4 60 0.0 0.0 6.80781537204711E-4 11.066784668799782 6.80781537204711E-4 61 0.0 0.0 6.80781537204711E-4 11.310504459119068 6.80781537204711E-4 62 0.0 0.0 6.80781537204711E-4 11.48410375110627 6.80781537204711E-4 63 0.0 0.0 6.80781537204711E-4 11.726461978351146 6.80781537204711E-4 64 0.0 0.0 6.80781537204711E-4 11.951119885628701 6.80781537204711E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGCTA 15 0.002221287 69.99796 41 CCCGTGT 85 0.0 61.762905 33 CAGTGTA 40 1.0588337E-8 61.24821 34 ACGTGTA 30 8.345331E-6 58.331635 34 GCCGTAT 80 0.0 56.873337 54 AGAACTC 20 0.006940825 52.498466 40 GCGCTCA 20 0.006940825 52.498466 11 CCGACTA 75 0.0 51.331833 21 CCGTGTA 90 0.0 50.55408 34 GTAGATC 160 0.0 50.31103 38 CAAGTGT 30 5.8634114E-4 46.665306 33 CTAAAAT 30 5.8634114E-4 46.665306 25 GCGTAGA 30 5.8634114E-4 46.665306 36 CGTATCA 105 0.0 46.665302 56 AGTGTAG 150 0.0 46.665302 35 ACGCTTC 140 0.0 44.998684 15 TTCGTGT 55 1.3024692E-7 44.54415 33 GTGTCGC 55 1.3024692E-7 44.54415 36 TAGATCT 205 0.0 44.388947 39 ATCTCGG 160 0.0 43.748722 42 >>END_MODULE