##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779744_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 105751 Sequences flagged as poor quality 0 Sequence length 76 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.23472118466965 32.0 21.0 34.0 12.0 34.0 2 25.89064878819113 31.0 21.0 34.0 12.0 34.0 3 25.240196310200375 27.0 21.0 34.0 11.0 34.0 4 26.193671927452222 32.0 21.0 34.0 12.0 34.0 5 26.124358162097757 32.0 21.0 34.0 11.0 34.0 6 27.757477470662216 34.0 21.0 37.0 11.0 38.0 7 28.74416317576193 34.0 21.0 38.0 12.0 38.0 8 28.051318663653298 34.0 21.0 38.0 11.0 38.0 9 29.482491891329634 34.0 22.0 38.0 12.0 38.0 10-11 28.83103233066354 34.0 21.0 38.0 11.0 38.0 12-13 28.548462898695995 33.0 21.0 38.0 11.0 38.0 14-15 27.9479626670197 33.5 21.0 37.5 11.0 38.0 16-17 27.85243165549262 32.5 16.0 37.5 11.0 38.0 18-19 28.377027167591798 34.0 21.0 38.0 11.0 38.0 20-21 27.361329916501973 31.0 16.0 37.0 11.0 38.0 22-23 27.46906885041276 31.0 16.0 37.5 11.0 38.0 24-25 28.03817457990941 33.0 21.0 37.5 11.0 38.0 26-27 26.97190097493168 30.5 16.0 37.0 11.0 38.0 28-29 28.35398246825089 34.0 21.0 38.0 11.0 38.0 30-31 28.776016302446315 34.0 21.0 38.0 11.0 38.0 32-33 28.92718744976407 34.5 21.0 38.0 11.0 38.0 34-35 28.983059261850954 35.0 21.0 38.0 11.0 38.0 36-37 27.6545895547087 32.5 16.0 37.5 11.0 38.0 38-39 26.71806413178126 27.0 16.0 37.0 11.0 38.0 40-41 26.992099365490635 31.0 15.0 37.0 11.0 38.0 42-43 27.768943083280536 32.5 16.0 37.5 11.0 38.0 44-45 29.011399419390834 34.5 21.0 38.0 11.0 38.0 46-47 28.066481640835548 33.5 16.0 38.0 11.0 38.0 48-49 27.40082836096113 32.5 16.0 37.5 11.0 38.0 50-51 25.994576883433727 27.0 11.0 37.0 11.0 38.0 52-53 28.06096396251572 34.0 21.0 37.5 11.0 38.0 54-55 27.475825287704133 32.5 16.0 37.5 11.0 38.0 56-57 27.871533129710357 32.5 16.0 38.0 11.0 38.0 58-59 28.549668561053796 34.0 21.0 38.0 11.0 38.0 60-61 29.07143667672173 36.0 21.0 38.0 11.0 38.0 62-63 29.037418085880986 35.5 21.0 38.0 11.0 38.0 64-65 28.842757988104132 35.0 21.0 38.0 11.0 38.0 66-67 27.39064406010345 32.0 18.5 37.5 11.0 38.0 68-69 27.359599436411948 32.0 19.5 37.5 11.0 38.0 70-71 27.125549640192528 31.5 15.5 37.0 11.0 38.0 72-73 26.29306105852427 27.5 11.0 37.0 11.0 38.0 74-75 27.342152792881393 32.5 16.0 37.5 11.0 38.0 76 27.484042704087905 33.0 18.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 2.0 5 0.0 6 1.0 7 0.0 8 0.0 9 0.0 10 0.0 11 13.0 12 88.0 13 466.0 14 1170.0 15 2045.0 16 3402.0 17 4949.0 18 6585.0 19 6661.0 20 5851.0 21 4473.0 22 3267.0 23 2437.0 24 2013.0 25 1930.0 26 1818.0 27 2054.0 28 2207.0 29 2445.0 30 2942.0 31 3528.0 32 4342.0 33 5829.0 34 7778.0 35 10034.0 36 11182.0 37 6237.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.499929078684836 17.399362653781054 14.817826781779841 35.28288148575427 2 17.117568628192643 14.316649487948105 45.47947537139129 23.086306512467967 3 17.430568032453593 14.240054467570046 42.631275354370175 25.69810214560619 4 14.268557919621749 22.250591016548462 28.364066193853425 35.11678486997636 5 13.963934147194825 25.93261529441802 41.18542614254238 18.918024415844766 6 26.016775255080333 32.746735255458574 15.624438539588278 25.612050949872817 7 24.217265084963735 21.844710688315004 19.957258087393974 33.98076613932729 8 20.14827984037221 34.10720027235073 17.097573430673503 28.646946456603562 9 20.765600915392397 14.740843711878352 18.26245661815465 46.231098754574596 10-11 23.143047628954697 22.429062504432853 27.29929216176728 27.12859770484517 12-13 21.51743116663278 16.796618263834056 31.15575750984685 30.53019305968632 14-15 24.550453683608286 21.488384848527833 22.363126563305293 31.598034904558585 16-17 28.051369587728797 18.584593852104383 23.40285691319088 29.96117964697594 18-19 20.761934483280374 18.48000832198517 28.58554622484491 32.172510969889544 20-21 27.576668841669267 17.922967081808466 24.72788826160553 29.77247581491674 22-23 29.23670510801878 17.078740939330753 23.53669896118511 30.147854991465355 24-25 22.037240179297562 22.83537911599493 21.21167703742931 33.915703667278194 26-27 26.47346695604068 21.975403208647176 23.92915064943662 27.621979185875524 28-29 23.33279745805988 22.408885442475366 23.732339757532202 30.525977341932553 30-31 22.47114507137487 21.83565102676735 25.33417813692438 30.3590257649334 32-33 23.0983824370777 21.00609482200188 25.043618877399037 30.85190386352138 34-35 23.142938200387725 21.0728639651993 25.10567875549671 30.67851907891626 36-37 26.997966806941225 17.02775544943023 29.951770769303515 26.022506974325026 38-39 26.411650669062364 15.32081895125065 34.757198921934844 23.51033145775214 40-41 24.08043993247812 22.494054008047776 24.045922444405566 29.37958361506854 42-43 19.355159011603167 23.066848232101147 27.27973370402943 30.298259052266257 44-45 19.463515660463003 18.732032077470116 30.514733696474504 31.289718565592374 46-47 25.81127150821083 17.826931897167228 27.299764999598086 29.062031595023857 48-49 25.13263038441534 18.192822355666934 29.744195943070594 26.930351316847133 50-51 32.40516144895055 16.491009073672167 27.692904189776396 23.410925287600893 52-53 18.526644285781835 20.897441959430708 29.608492127287345 30.96742162750012 54-55 24.545252516655555 18.905296206457958 26.48055945643077 30.06889182045572 56-57 24.4373309628733 19.266449794791292 25.481814914984962 30.81440432735044 58-59 19.096411177833467 21.733888127098208 28.549340394344885 30.620360300723437 60-61 19.142930095324555 20.095229989408384 27.884797246179456 32.87704266908761 62-63 19.157296464068544 22.0842041553578 27.37438884843441 31.384110532139243 64-65 19.288764060882023 23.079469102704135 26.751492971332112 30.88027386508173 66-67 17.56389342033714 29.07676667375937 20.816606378702982 32.54273352720051 68-69 18.161524054560246 28.52588963090486 21.023382962220246 32.28920335231465 70-71 17.77603351506239 30.070879061124323 20.38612302411023 31.766964399703056 72-73 16.613551468154522 31.726795593172252 19.822213816256088 31.837439122417138 74-75 18.662348101565087 26.157737954513216 24.901886614024306 30.278027329897395 76 19.42390255896204 24.669491044578518 26.88612335218353 29.020483044275906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.5 3 1.0 4 1.0 5 1.0 6 1.0 7 0.5 8 0.0 9 0.5 10 0.5 11 0.0 12 0.0 13 0.5 14 0.5 15 2.0 16 8.0 17 12.0 18 17.0 19 21.0 20 23.5 21 27.0 22 39.0 23 74.5 24 131.0 25 164.0 26 188.0 27 280.0 28 425.5 29 503.0 30 599.5 31 810.5 32 1065.5 33 1206.0 34 1352.0 35 1708.0 36 2124.5 37 2331.0 38 2539.0 39 2971.0 40 3466.0 41 3994.5 42 4252.0 43 4385.5 44 4714.5 45 4870.5 46 4831.0 47 4792.0 48 4690.5 49 4498.0 50 4368.0 51 4243.0 52 3972.5 53 3714.0 54 3601.0 55 3484.5 56 3354.0 57 3269.5 58 3199.0 59 3122.5 60 2952.0 61 2799.5 62 2741.0 63 2696.5 64 2574.0 65 2453.5 66 2340.0 67 2269.0 68 2233.5 69 2078.0 70 1911.0 71 1864.0 72 1783.5 73 1555.5 74 1293.0 75 1178.0 76 1080.0 77 936.5 78 739.5 79 588.0 80 484.0 81 333.0 82 241.5 83 197.0 84 159.5 85 85.5 86 33.5 87 18.0 88 12.5 89 7.0 90 5.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 9.456175355315789E-4 5 0.0 6 0.0 7 0.0 8 0.004728087677657895 9 0.0037824701421263155 10-11 0.0061465139809552625 12-13 0.0061465139809552625 14-15 0.005200896445423684 16-17 0.007092131516486841 18-19 0.006619322748721053 20-21 0.0037824701421263155 22-23 0.005200896445423684 24-25 0.004728087677657895 26-27 0.005200896445423684 28-29 0.004728087677657895 30-31 0.0061465139809552625 32-33 0.005200896445423684 34-35 0.005673705213189474 36-37 0.005673705213189474 38-39 0.005673705213189474 40-41 0.007092131516486841 42-43 0.0037824701421263155 44-45 0.006619322748721053 46-47 0.0061465139809552625 48-49 0.005673705213189474 50-51 0.005200896445423684 52-53 0.005673705213189474 54-55 0.005200896445423684 56-57 0.004728087677657895 58-59 0.005673705213189474 60-61 0.006619322748721053 62-63 0.007564940284252631 64-65 0.005200896445423684 66-67 0.008037749052018421 68-69 0.031205378672542104 70-71 0.007092131516486841 72-73 0.005673705213189474 74-75 0.005673705213189474 76 0.004728087677657895 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 105751.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.61162060326632 #Duplication Level Percentage of deduplicated Percentage of total 1 97.99218229070793 95.65175719846695 2 1.6798147246854804 3.2793887517955875 3 0.24700441182685307 0.7233150280372719 4 0.06199892472844572 0.2420726207361404 5 0.011999777889029251 0.05856588833136935 6 0.004999907260663616 0.029282943034764808 7 0.0 0.0 8 0.001999962901623566 0.015617569597910972 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0037824701421263155 0.0 2 0.0 0.0 0.0 0.0037824701421263155 0.0 3 0.0 0.0 0.0 0.0037824701421263155 0.0 4 0.0 0.0 0.0 0.011347410426378947 0.0 5 0.0 0.0 0.0 0.011347410426378947 0.0 6 0.0 0.0 0.0 0.011347410426378947 0.0 7 0.0 0.0 0.0 0.012293027961910525 0.0 8 0.0 0.0 0.0 0.013238645497442105 0.0 9 0.0 0.0 0.0 0.016075498104036842 0.0 10 0.0 0.0 0.0 0.0179667331751 0.0 11 0.0 0.0 0.0 0.0179667331751 0.0 12 0.0 0.0 0.0 0.0179667331751 0.0 13 0.0 0.0 0.0 0.0179667331751 0.0 14 0.0 0.0 0.0 0.01891235071063158 0.0 15 0.0 0.0 0.0 0.01891235071063158 0.0 16 0.0 0.0 0.0 0.022694820852757893 0.0 17 0.0 0.0 0.0 0.02553167345935263 0.0 18 0.0 0.0 0.0 0.027422908530415787 0.0 19 0.0 0.0 0.0 0.03498784881466842 0.0 20 0.0 0.0 0.0 0.04160717156338947 0.0 21 0.0 0.0 0.0 0.044444024169984206 0.0 22 0.0 0.0 0.0 0.06335637488061578 0.0 23 0.0 0.0 0.0 0.06524760995167894 0.0 24 0.0 0.0 0.0 0.07470378530699473 0.0 25 0.0 0.0 0.0 0.08415996066231052 0.0 26 0.0 0.0 0.0 0.09739860615975263 0.0 27 0.0 0.0 0.0 0.15319004075611578 0.0 28 0.0 0.0 0.0 0.19479721231950525 0.0 29 0.0 0.0 0.0 0.24775179430927366 0.0 30 0.0 0.0 0.0 0.3016519938345737 0.0 31 0.0 0.0 0.0 0.32907490236498943 0.0 32 0.0 0.0 0.0 0.383920719425821 0.0 33 0.0 0.0 0.0 0.45767888719728417 0.0 34 0.0 0.0 0.0 0.5777723142097947 0.0 35 0.0 0.0 0.0 0.8321434312677894 0.0 36 0.0 0.0 0.0 0.976822914204121 0.0 37 0.0 0.0 0.0 1.3550699284167527 0.0 38 0.0 0.0 0.0 1.7144045919187525 0.0 39 0.0 0.0 0.0 2.1087271042354208 0.0 40 0.0 0.0 0.0 2.5522217283997315 0.0 41 0.0 0.0 0.0 2.988151412279789 0.0 42 0.0 0.0 0.0 3.4883830885759948 0.0 43 0.0 0.0 0.0 3.931877712740305 0.0 44 0.0 0.0 0.0 4.468988472922242 0.0 45 0.0 0.0 0.0 4.767803614150221 0.0 46 0.0 0.0 0.0 5.181984094713052 0.0 47 0.0 0.0 0.0 5.63588051176821 0.0 48 0.0 0.0 0.0 5.912000832143431 0.0 49 0.0 0.0 0.0 6.153133303703984 0.0 50 0.0 0.0 0.0 6.522869760096831 0.0 51 0.0 0.0 0.0 6.915301037342436 0.0 52 0.0 0.0 0.0 7.231137294209984 0.0 53 0.0 0.0 0.0 7.66044765534132 0.0 54 0.0 0.0 0.0 8.093540486614783 0.0 55 0.0 0.0 0.0 8.40275742073361 0.0 56 0.0 0.0 0.0 8.728995470492006 0.0 57 0.0 0.0 0.0 8.98998591029872 0.0 58 0.0 0.0 0.0 9.243411409821183 0.0 59 0.0 0.0 0.0 9.548845873797884 0.0 60 0.0 0.0 0.0 9.72662197047782 0.0 61 0.0 0.0 0.0 9.920473565261794 0.0 62 0.0 0.0 0.0 10.038675757203242 0.0 63 0.0 0.0 0.0 10.20605006099233 0.0 64 0.0 0.0 0.0 10.387608627814394 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACCAT 15 0.0022193068 70.00001 56 GTCGTAT 35 3.6707206E-9 70.00001 54 CGTGTAC 40 1.05483196E-8 61.25 35 TACGCTT 35 2.9500006E-7 60.000004 14 CCGTGTA 80 0.0 56.875 34 GTGTAGC 80 0.0 56.875 36 TCGTGTA 75 0.0 56.0 34 CTTAAAG 25 2.3810889E-4 55.999996 42 TTCGTGT 50 9.677024E-10 55.999996 33 ATGTATA 25 2.3810889E-4 55.999996 28 TTTAGAT 80 0.0 52.5 37 GAGTACT 20 0.0069346814 52.5 36 TAGCACT 20 0.0069346814 52.5 39 TAGATCG 20 0.0069346814 52.5 41 GCGTCTA 20 0.0069346814 52.5 36 CCGTTCA 20 0.0069346814 52.5 36 GCGTACT 20 0.0069346814 52.5 36 ACGACTT 20 0.0069346814 52.5 24 TGTGTAG 100 0.0 52.499996 35 AGTGTAG 100 0.0 52.499996 35 >>END_MODULE