SRR1779742_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779742_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	117327
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGTAC	25	2.3821658E-4	55.999996	4
TCGTGTC	25	2.3821658E-4	55.999996	34
CGCCGTA	65	3.6379788E-12	53.846153	53
GGCCGTT	20	0.0069365622	52.5	14
CCCGTGT	20	0.0069365622	52.5	33
TCTCGAC	20	0.0069365622	52.5	37
GCCGTTA	20	0.0069365622	52.5	15
CTTCCGA	55	2.2573658E-9	50.90909	18
GTGTACA	30	5.8577186E-4	46.666668	36
ACTGTGT	30	5.8577186E-4	46.666668	33
CAGTGTA	45	1.6727827E-6	46.666664	34
TCGGTGG	80	2.910383E-11	43.75	45
CTGTGTA	40	4.5694964E-5	43.75	34
GCCGTAT	65	9.893483E-9	43.076923	54
CCTACGA	50	3.4541372E-6	42.0	21
GTAGATC	50	3.4541372E-6	42.0	38
TAGATCT	75	7.4396667E-10	42.0	39
TTCCGAC	60	2.5732697E-7	40.833336	19
TCTCGGT	95	3.6379788E-12	40.526318	43
ATACTGG	35	0.0012511654	40.0	53