SRR1779741_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779741_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	125327
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATAG	20	7.901122E-5	70.00001	62
ATTCGGT	15	0.0022202684	70.0	1
CAACGAT	20	0.0069376617	52.500004	39
GAGCGTC	20	0.0069376617	52.500004	23
TGCGAAC	20	0.0069376617	52.500004	26
TGAGCGT	20	0.0069376617	52.500004	22
CGGTGGT	30	5.85926E-4	46.666664	46
TACACCG	30	5.85926E-4	46.666664	5
TACAGAT	40	4.571292E-5	43.750004	5
ACACCGA	35	0.0012514922	40.0	6
GTAATAG	35	0.0012514922	40.0	51
GGTATAG	35	0.0012514922	40.0	1
TCGTATG	35	0.0012514922	40.0	9
CTCTCGG	35	0.0012514922	40.0	42
GCTCTCG	40	0.0024112435	35.000004	41
CCGGTGG	40	0.0024112435	35.000004	45
TCGGTGG	55	2.978365E-4	31.81818	45
TACCATT	45	0.0042939675	31.111109	27
AGTGTTG	45	0.0042939675	31.111109	45
CCACAGT	45	0.0042939675	31.111109	70