##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779738_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 93049 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.725563950176788 34.0 32.0 34.0 21.0 34.0 2 28.742286322260316 34.0 23.0 34.0 12.0 34.0 3 27.69251684596288 33.0 23.0 34.0 11.0 34.0 4 30.538544207890467 34.0 32.0 34.0 21.0 34.0 5 29.86963857752367 34.0 31.0 34.0 11.0 34.0 6 32.60836763425722 37.0 32.0 38.0 12.0 38.0 7 33.740179905211235 37.0 34.0 38.0 21.0 38.0 8 32.94594246042408 37.0 34.0 38.0 12.0 38.0 9 34.386914421433865 38.0 34.0 38.0 25.0 38.0 10-11 34.22797665746005 38.0 35.0 38.0 23.0 38.0 12-13 33.007866822856776 37.5 31.5 38.0 18.5 38.0 14-15 33.26108287031564 37.0 33.0 38.0 21.0 38.0 16-17 32.848843082676865 37.5 31.0 38.0 18.5 38.0 18-19 33.3735881094907 37.0 33.5 38.0 22.0 38.0 20-21 32.274178121204955 36.5 30.0 38.0 17.0 38.0 22-23 32.26914313963611 37.0 29.0 38.0 17.0 38.0 24-25 33.72386054659373 37.0 34.0 38.0 22.0 38.0 26-27 32.04550290707047 37.0 30.0 38.0 16.0 38.0 28-29 34.453325667121625 37.5 35.0 38.0 24.5 38.0 30-31 34.88862319852981 38.0 36.5 38.0 26.0 38.0 32-33 34.97452954894733 38.0 37.0 38.0 26.0 38.0 34-35 35.034288385689266 38.0 37.0 38.0 26.5 38.0 36-37 32.647067674021216 37.0 30.5 38.0 16.5 38.0 38-39 30.621269438682845 36.0 26.0 38.0 11.0 38.0 40-41 32.20964760502531 36.5 30.0 38.0 16.0 38.0 42-43 33.31667186106245 37.0 32.5 38.0 18.5 38.0 44-45 35.02685681737579 38.0 36.5 38.0 27.0 38.0 46-47 33.426216294640454 37.5 32.0 38.0 19.0 38.0 48-49 32.81357134413051 37.0 30.5 38.0 17.5 38.0 50-51 30.433803694827457 36.5 24.5 38.0 11.0 38.0 52-53 34.220211931348004 37.5 35.0 38.0 24.5 38.0 54-55 33.1910659974852 37.5 31.0 38.0 18.0 38.0 56-57 33.640270180227624 37.5 33.5 38.0 18.5 38.0 58-59 34.84993927930445 38.0 36.5 38.0 26.0 38.0 60-61 35.249164418747114 38.0 37.0 38.0 27.0 38.0 62-63 35.14410149491128 38.0 37.0 38.0 26.5 38.0 64-65 34.82706960848585 38.0 36.5 38.0 25.0 38.0 66-67 32.64697632430225 37.5 32.0 38.0 11.0 38.0 68-69 32.728589237928404 37.0 32.5 38.0 16.0 38.0 70-71 32.14886242732324 37.0 30.0 38.0 11.0 38.0 72-73 30.946275618222657 36.5 26.0 38.0 11.0 38.0 74-75 33.328789132607554 37.0 32.5 38.0 18.0 38.0 76 33.964212404217136 37.0 34.0 38.0 23.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 13.0 13 84.0 14 270.0 15 418.0 16 690.0 17 990.0 18 1322.0 19 1220.0 20 1108.0 21 916.0 22 791.0 23 692.0 24 696.0 25 779.0 26 901.0 27 1164.0 28 1478.0 29 1895.0 30 2703.0 31 3685.0 32 5387.0 33 7846.0 34 11795.0 35 16491.0 36 19304.0 37 10409.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 39.723156616406406 19.4961794323421 11.160786252404648 29.619877698846842 2 22.02925340412041 17.92281486098722 36.9858891551763 23.062042579716064 3 20.494578125503768 19.023310298874787 33.976721942202495 26.50538963341895 4 14.082902556717428 18.03458392889768 34.34641962836785 33.53609388601704 5 14.527829423207129 30.976152349837182 38.17128609657277 16.324732130382916 6 28.263603047856506 33.168545605003814 17.521950800116066 21.04590054702361 7 28.242108996335265 28.008898537329795 20.498876935808017 23.250115530526926 8 23.610140893507722 32.11103827015873 18.820191511999056 25.458629324334492 9 24.11202699652871 16.115165128050812 20.664381132521576 39.10842674289891 10-11 24.98629754215521 24.340401293941902 27.054562649786675 23.61873851411622 12-13 25.145353523412396 20.914786832744035 28.378596223495144 25.561263420348418 14-15 23.087422150813822 23.357173946920152 24.197058523243257 29.358345379022765 16-17 23.563107213481214 25.051586278050035 26.815729515948757 24.56957699251999 18-19 22.045492404498727 24.900455138986658 27.87148637538488 25.182566081129732 20-21 23.050758202667414 24.31836989113263 28.125503766832527 24.50536813936743 22-23 23.3812292448065 23.735881094906986 28.71067931949833 24.172210340788187 24-25 22.202817870154433 25.963202183795637 25.689690378187834 26.144289567862096 26-27 21.973906221453213 24.952444411009253 28.538189556040365 24.53545981149717 28-29 22.482240539930572 26.245311610011928 26.82726305494954 24.445184795107956 30-31 22.337813075976506 25.81986813328533 27.010107632041354 24.83221115869681 32-33 22.230222785844017 26.18835237348064 26.547840385173405 25.033584455501938 34-35 22.585411987232533 25.4102677084117 27.094863996389 24.90945630796677 36-37 22.856237036400177 23.891712968435986 30.219024385001454 23.03302561016239 38-39 22.777783748347645 23.063117282292126 32.48503476662833 21.674064202731895 40-41 22.540395600144013 23.910648747696094 26.275007119942828 27.27394853221707 42-43 21.06040903180045 24.45861857730873 27.05832410880289 27.42264828208793 44-45 21.50157443927393 24.561790024610687 28.356564820685875 25.580070715429503 46-47 22.38175584906877 23.509118851357886 29.5913980805812 24.517727218992142 48-49 22.3043772635923 24.11202699652871 29.65964169416114 23.923954045717846 50-51 22.81647304108588 22.520392481380778 31.996045094520092 22.66708938301325 52-53 20.571419359692207 24.86646820492429 28.8745714623478 25.68754097303571 54-55 21.476856280024503 24.05882921901364 29.09327343657643 25.37104106438543 56-57 21.065782544680758 24.5515803501381 28.78160968951843 25.601027415662713 58-59 20.024503350403283 25.237376207031815 28.575957699479304 26.16216274308559 60-61 20.25513713352248 24.725410540796148 28.466490413549995 26.552961912131373 62-63 19.832130555570483 25.271229520088983 28.22452806869536 26.672111855645177 64-65 20.62569183978334 25.363518146352998 27.344194994035405 26.666595019828264 66-67 19.540884592443724 23.906349914292008 25.47005056502791 31.08271492823635 68-69 19.688606792177012 24.368103962551125 25.526826358247295 30.416462887024565 70-71 20.347990564060677 23.916559643626712 24.734950052929385 31.000499739383226 72-73 19.825038420617094 23.13727176004041 23.465056045739342 33.57263377360316 74-75 21.04590054702361 25.038957968382253 25.066900235359864 28.848241249234274 76 22.23046169718855 24.388487662281833 25.213868111082455 28.167182529447167 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 0.5 12 0.0 13 0.0 14 0.0 15 1.0 16 2.0 17 2.0 18 2.5 19 9.0 20 17.0 21 19.0 22 29.5 23 63.5 24 114.0 25 141.0 26 182.5 27 278.0 28 421.5 29 511.0 30 623.0 31 833.0 32 1081.0 33 1231.0 34 1484.0 35 1950.5 36 2481.0 37 2798.0 38 3167.0 39 3864.0 40 4545.0 41 5102.0 42 5306.0 43 5450.0 44 5702.0 45 5845.5 46 5881.0 47 5753.5 48 5478.5 49 5101.5 50 4872.0 51 4599.5 52 4004.5 53 3350.5 54 3019.0 55 2764.5 56 2249.0 57 1847.5 58 1707.0 59 1576.0 60 1336.5 61 1210.0 62 1192.0 63 1123.5 64 1035.5 65 1031.0 66 1004.5 67 963.0 68 964.0 69 911.5 70 837.0 71 816.0 72 765.0 73 688.5 74 597.5 75 532.0 76 460.0 77 344.5 78 256.5 79 212.0 80 178.0 81 121.0 82 81.0 83 64.0 84 52.5 85 31.5 86 16.0 87 10.0 88 11.5 89 8.5 90 3.5 91 2.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 5.373512880310374E-4 16-17 0.0010747025760620749 18-19 5.373512880310374E-4 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 5.373512880310374E-4 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 5.373512880310374E-4 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 5.373512880310374E-4 60-61 0.0010747025760620749 62-63 5.373512880310374E-4 64-65 0.0 66-67 5.373512880310374E-4 68-69 0.01665788992896216 70-71 5.373512880310374E-4 72-73 0.0 74-75 0.0 76 0.0010747025760620749 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 93049.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 94.93492675901945 #Duplication Level Percentage of deduplicated Percentage of total 1 96.3933164281833 91.51092435168567 2 2.658032965042565 5.046803297187504 3 0.5433798224959246 1.5475717095293877 4 0.22754030067016845 0.8640608711539082 5 0.08829922115558776 0.4191340046642092 6 0.046413693171526896 0.2643768337112704 7 0.015848578156131138 0.10532085245408332 8 0.012452454265531607 0.09457382669346259 9 0.0022640825937330195 0.019344646369117348 >10 0.012452454265531607 0.12788960655138693 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0010747025760620749 0.0 6 0.0 0.0 0.0 0.0010747025760620749 0.0 7 0.0 0.0 0.0 0.0010747025760620749 0.0 8 0.0 0.0 0.0 0.0010747025760620749 0.0 9 0.0 0.0 0.0 0.0010747025760620749 0.0 10 0.0 0.0 0.0 0.0010747025760620749 0.0 11 0.0 0.0 0.0 0.0010747025760620749 0.0 12 0.0 0.0 0.0010747025760620749 0.0010747025760620749 0.0 13 0.0 0.0 0.0010747025760620749 0.0021494051521241497 0.0 14 0.0 0.0 0.0010747025760620749 0.0021494051521241497 0.0 15 0.0 0.0 0.0010747025760620749 0.0021494051521241497 0.0 16 0.0 0.0 0.0010747025760620749 0.0021494051521241497 0.0 17 0.0 0.0 0.0010747025760620749 0.0021494051521241497 0.0 18 0.0 0.0 0.0010747025760620749 0.0021494051521241497 0.0 19 0.0 0.0 0.0010747025760620749 0.0032241077281862244 0.0 20 0.0 0.0 0.0010747025760620749 0.004298810304248299 0.0 21 0.0 0.0 0.0010747025760620749 0.008597620608496599 0.0 22 0.0 0.0 0.0010747025760620749 0.013971133488806972 0.0 23 0.0 0.0 0.0010747025760620749 0.013971133488806972 0.0 24 0.0010747025760620749 0.0 0.0010747025760620749 0.019344646369117348 0.0 25 0.0010747025760620749 0.0 0.0010747025760620749 0.02256875409730357 0.0 26 0.0010747025760620749 0.0 0.0010747025760620749 0.025792861825489795 0.0 27 0.0010747025760620749 0.0 0.0010747025760620749 0.03546518501004847 0.0 28 0.0010747025760620749 0.0 0.0010747025760620749 0.04513750819460714 0.0 29 0.0010747025760620749 0.0 0.0010747025760620749 0.05480983137916581 0.0 30 0.0010747025760620749 0.0 0.0010747025760620749 0.07307977517222108 0.0 31 0.0010747025760620749 0.0 0.0010747025760620749 0.08275209835677975 0.0 32 0.0010747025760620749 0.0 0.0010747025760620749 0.09564852926952466 0.0 33 0.0010747025760620749 0.0 0.0010747025760620749 0.11606787821470409 0.0 34 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 0.13863663231200765 0.0 35 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 0.18162473535449064 0.0 36 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 0.23428516158153231 0.0 37 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 0.38904233253447107 0.0 38 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 0.6115057657793206 0.0 39 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 0.8210727681114252 0.0 40 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 1.1316618125933648 0.0 41 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 1.6034562434846156 0.0010747025760620749 42 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 2.069877161495556 0.0010747025760620749 43 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 2.6179754752872144 0.0010747025760620749 44 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 3.113413362851831 0.0010747025760620749 45 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 3.4949327773538674 0.0010747025760620749 46 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 3.9312620232350697 0.0010747025760620749 47 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 4.515900224612839 0.0010747025760620749 48 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 4.918913690636116 0.0010747025760620749 49 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 5.315478941203022 0.0010747025760620749 50 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 5.892594224548357 0.0010747025760620749 51 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 6.601897924749325 0.0010747025760620749 52 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 7.17363969521435 0.0010747025760620749 53 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 7.938827929370547 0.0010747025760620749 54 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 8.669625681092757 0.0010747025760620749 55 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 9.125299573343078 0.0010747025760620749 56 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 9.605691624842825 0.0010747025760620749 57 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 10.01300390117035 0.0010747025760620749 58 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 10.392373910520263 0.0010747025760620749 59 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 10.842674289890272 0.0010747025760620749 60 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 11.160786252404646 0.0010747025760620749 61 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 11.481047620071145 0.0010747025760620749 62 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 11.729303915141484 0.0010747025760620749 63 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 12.073208739481348 0.0010747025760620749 64 0.0010747025760620749 0.0010747025760620749 0.0010747025760620749 12.375200163354792 0.0010747025760620749 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTGTC 15 0.002218463 70.0 34 AGTACGG 15 0.002218463 70.0 5 TAGATCT 55 3.45608E-11 57.272724 39 GATCTTG 25 2.3795883E-4 56.000004 41 GCCGTAT 25 2.3795883E-4 56.000004 54 CGTGCGA 20 0.0069320644 52.5 10 CCGTGTA 20 0.0069320644 52.5 34 GTAGATC 40 7.409544E-7 52.5 38 CAAGGTC 20 0.0069320644 52.5 64 CGGTGGT 40 7.409544E-7 52.5 46 GACGCTT 20 0.0069320644 52.5 14 CGTCCTA 20 0.0069320644 52.5 15 CTTACGC 40 7.409544E-7 52.5 12 TGCAACG 20 0.0069320644 52.5 30 AGATCTC 45 1.6690119E-6 46.666668 40 CGGCGGT 30 5.851422E-4 46.666664 46 AGATCTT 30 5.851422E-4 46.666664 40 AGGACAA 30 5.851422E-4 46.666664 50 GTGTCGA 30 5.851422E-4 46.666664 36 TCTTACG 40 4.5621517E-5 43.75 11 >>END_MODULE