##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779737_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 62692 Sequences flagged as poor quality 0 Sequence length 76 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.138550373253366 33.0 23.0 34.0 12.0 34.0 2 27.025792764627067 32.0 23.0 34.0 12.0 34.0 3 26.116617750271168 32.0 21.0 34.0 11.0 34.0 4 28.020879857079052 33.0 23.0 34.0 12.0 34.0 5 27.731895616665604 33.0 23.0 34.0 11.0 34.0 6 29.797916799591654 35.0 24.0 38.0 11.0 38.0 7 30.857079053148727 36.0 26.0 38.0 12.0 38.0 8 30.056945064761052 36.0 24.0 38.0 11.0 38.0 9 31.54008485931219 37.0 27.0 38.0 12.0 38.0 10-11 31.12373987111593 37.0 26.0 38.0 11.0 38.0 12-13 30.42369042302048 35.5 25.0 38.0 11.0 38.0 14-15 30.164558476360618 35.0 24.5 38.0 11.0 38.0 16-17 29.92282109360046 35.5 24.0 38.0 11.0 38.0 18-19 30.476121355196835 36.0 25.5 38.0 11.0 38.0 20-21 29.43946596056913 35.0 23.5 38.0 11.0 38.0 22-23 29.45582370956422 35.0 23.5 38.0 11.0 38.0 24-25 30.440311363491354 36.0 24.5 38.0 11.0 38.0 26-27 29.10788457857462 34.5 22.0 38.0 11.0 38.0 28-29 30.920891022778026 37.0 26.0 38.0 11.0 38.0 30-31 31.38311108275378 37.0 26.5 38.0 11.0 38.0 32-33 31.510822752504307 37.0 27.0 38.0 11.0 38.0 34-35 31.570120589548907 37.0 27.0 38.0 11.0 38.0 36-37 29.715155043705735 35.0 23.5 38.0 11.0 38.0 38-39 28.316435908887897 34.0 21.0 37.5 11.0 38.0 40-41 29.151646143048552 34.0 22.0 37.5 11.0 38.0 42-43 30.07332674025394 35.5 24.0 38.0 11.0 38.0 44-45 31.574531040643144 37.0 27.0 38.0 11.0 38.0 46-47 30.38711478338544 35.5 24.5 38.0 11.0 38.0 48-49 29.686092324379505 35.0 23.5 38.0 11.0 38.0 50-51 27.794718624385887 33.0 21.0 37.5 11.0 38.0 52-53 30.65400689083137 36.5 25.0 38.0 11.0 38.0 54-55 29.85549192879474 35.5 23.5 38.0 11.0 38.0 56-57 30.301960377719645 36.0 24.0 38.0 11.0 38.0 58-59 31.203494863778474 37.0 26.0 38.0 11.0 38.0 60-61 31.728426274484782 37.5 27.0 38.0 11.0 38.0 62-63 31.65731672302686 37.5 27.0 38.0 11.0 38.0 64-65 31.384243603649587 37.5 26.0 38.0 11.0 38.0 66-67 29.566738977860012 35.5 23.0 38.0 11.0 38.0 68-69 29.582020034454157 35.0 23.0 38.0 11.0 38.0 70-71 29.15702162955401 34.5 22.0 38.0 11.0 38.0 72-73 28.184800293498373 33.5 21.0 37.5 11.0 38.0 74-75 29.899580488738593 35.5 24.0 37.5 11.0 38.0 76 30.11942512601289 36.0 24.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 28.0 13 177.0 14 490.0 15 829.0 16 1414.0 17 2008.0 18 2517.0 19 2566.0 20 2306.0 21 1750.0 22 1268.0 23 1022.0 24 927.0 25 826.0 26 901.0 27 1040.0 28 1212.0 29 1453.0 30 1812.0 31 2384.0 32 3296.0 33 4499.0 34 6213.0 35 8028.0 36 9020.0 37 4705.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.66949531040643 19.048682447521216 14.159701397307472 32.122120844764886 2 18.381930708862374 16.95591144005615 42.58119058253047 22.08096726855101 3 18.50634849741594 18.008677343201683 39.228290690997255 24.25668346838512 4 14.13736999936196 20.557646908696483 31.713775282332673 33.59120780960888 5 14.269763287181778 28.02430932176354 39.92056402730811 17.78536336374657 6 25.921967715178972 33.66617750271167 17.482294391628916 22.929560390480443 7 25.089325591782046 24.888343010272443 20.48746251515345 29.534868882792065 8 21.292987941045112 32.715497990174185 18.814202769093345 27.17731129968736 9 21.635934409494034 14.98117782173164 20.23384163848657 43.14904613028776 10-11 23.999074842085115 23.488642889044854 27.077617558859185 25.434664710010846 12-13 22.939928539526573 18.602054488610985 30.17450392394564 28.2835130479168 14-15 24.42177630319658 22.236489504242964 23.074714477126268 30.267019715434184 16-17 26.368595674089196 21.103171058508263 24.86999936196006 27.65823390544248 18-19 21.727652651055955 20.94685127288968 28.477317680086774 28.84817839596759 20-21 25.87331716965482 20.76660498947234 25.950679512537484 27.409398328335357 22-23 26.98111401773751 19.824698526127733 25.6436227907867 27.55056466534805 24-25 22.69109296241945 23.863491354558793 22.77882345434824 30.666592228673515 26-27 25.11085943980093 22.90244369297518 25.639635041153575 26.347061826070313 28-29 23.212690614432464 23.833982007273654 25.139571237159448 27.813756141134434 30-31 22.84502009825815 23.172813118101192 25.575831047023545 28.406335736617113 32-33 23.349869201812034 22.95348688827921 25.259203726153256 28.437440183755502 34-35 23.44078989344733 22.747719007209852 25.49687360428763 28.314617495055188 36-37 25.74331653161488 19.71623173610668 29.79806035857845 24.74239137369999 38-39 25.288713073438394 18.458495501818415 33.549735213424356 22.703056211318827 40-41 23.866074348197124 23.346067648724308 24.369332365631706 28.418525637446862 42-43 20.620653352899893 23.66968672238882 26.77773878644803 28.931921138263256 44-45 20.833599183308877 21.316116888917247 28.992534932686787 28.85774899508709 46-47 24.993619600586996 20.2976456326166 27.697313851847127 27.011420914949273 48-49 24.964110253301858 20.76102213998596 29.14087921903911 25.133988387673067 50-51 29.33627895106234 18.627576086263 28.923945638997 23.11219932367766 52-53 20.05439290499585 22.360109742869906 28.650386014164486 28.935111337969754 54-55 24.11073183181267 20.979550819881325 27.22037899572513 27.689338352580872 56-57 24.357174759139923 21.363172334588146 26.05914630255854 28.220506603713392 58-59 20.674089197983793 23.03962228035475 27.812161041281186 28.474127480380275 60-61 20.681267147323425 21.43335672813118 27.832897339373446 30.052478785171953 62-63 19.877336821285013 23.014100682702736 27.54338671600842 29.565175780003827 64-65 20.51218656287884 24.368340458112677 26.3717858737957 28.747687105212787 66-67 19.45782555988005 26.690008294519235 22.132010463855035 31.720155681745677 68-69 19.40033022517528 26.93967408210961 22.399476744649792 31.260518948065315 70-71 19.52880750334971 27.29215848912142 21.495565622407963 31.68346838512091 72-73 18.76475467364257 27.704491801186755 20.442799719262425 33.08795380590825 74-75 20.676481847763668 24.755949722452623 23.321954954380146 31.245613475403562 76 20.736298092260576 23.286862757608624 24.68895552861609 31.287883621514705 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.5 14 1.0 15 0.5 16 1.0 17 2.0 18 3.5 19 6.5 20 16.0 21 24.0 22 24.0 23 29.0 24 49.5 25 65.0 26 87.0 27 130.5 28 202.0 29 252.0 30 306.5 31 431.0 32 575.0 33 649.0 34 778.0 35 1054.0 36 1356.0 37 1511.0 38 1697.0 39 2046.5 40 2465.5 41 2866.0 42 3011.0 43 3087.0 44 3225.5 45 3390.5 46 3493.0 47 3465.5 48 3362.0 49 3102.5 50 2919.0 51 2812.5 52 2508.5 53 2178.0 54 2045.0 55 1944.5 56 1700.5 57 1480.0 58 1403.0 59 1374.0 60 1301.5 61 1247.5 62 1237.0 63 1234.5 64 1227.5 65 1218.0 66 1190.0 67 1167.0 68 1124.5 69 1044.0 70 968.0 71 930.0 72 890.5 73 810.5 74 694.5 75 619.0 76 582.0 77 473.0 78 336.5 79 272.0 80 227.0 81 146.0 82 95.5 83 81.0 84 60.0 85 28.0 86 15.0 87 13.0 88 10.5 89 6.0 90 2.5 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 7.975499266254068E-4 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.011963248899381102 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 62692.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 96.62476871052128 #Duplication Level Percentage of deduplicated Percentage of total 1 97.38840464870576 94.1013207426785 2 2.047015319598521 3.9558476360620176 3 0.37143423137876386 1.076692400944299 4 0.11885895404120445 0.4593887577362342 5 0.0462229265715795 0.2233139794551139 6 0.016508188061278396 0.09570599119504881 7 0.003301637612255679 0.022331397945511387 8 0.006603275224511358 0.05104319530402603 9 0.0016508188061278395 0.01435589867925732 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.003190199706501627 0.0 2 0.0 0.0 0.0 0.003190199706501627 0.0 3 0.0 0.0 0.0 0.006380399413003254 0.0 4 0.0 0.0 0.0 0.00957059911950488 0.0 5 0.0 0.0 0.0 0.011165698972755694 0.0 6 0.0 0.0 0.0 0.012760798826006508 0.0 7 0.0 0.0 0.0 0.012760798826006508 0.0 8 0.0 0.0 0.0 0.012760798826006508 0.0 9 0.0 0.0 0.0 0.015950998532508136 0.0 10 0.0 0.0 0.0 0.015950998532508136 0.0 11 0.0 0.0 0.0 0.01754609838575895 0.0 12 0.0 0.0 0.0 0.01754609838575895 0.0 13 0.0 0.0 0.0 0.01914119823900976 0.0 14 0.0 0.0 0.0 0.028711797358514642 0.0 15 0.0 0.0 0.0 0.028711797358514642 0.0 16 0.0 0.0 0.0 0.028711797358514642 0.0 17 0.0 0.0 0.0 0.028711797358514642 0.0 18 0.0 0.0 0.0 0.030306897211765455 0.0 19 0.0 0.0 0.0 0.03190199706501627 0.0 20 0.0 0.0 0.0 0.033497096918267084 0.0 21 0.0 0.0 0.0 0.0350921967715179 0.0 22 0.0 0.0 0.0 0.0590186945702801 0.0 23 0.0 0.0 0.0 0.06220889427678172 0.0 24 0.0 0.0 0.0 0.07975499266254067 0.0 25 0.0 0.0 0.0 0.08454029222229312 0.0 26 0.0 0.0 0.0 0.08613539207554392 0.0 27 0.0 0.0 0.0 0.11165698972755694 0.0 28 0.0 0.0 0.0 0.13558348752631916 0.0 29 0.0 0.0 0.0 0.15791488547183052 0.0 30 0.0 0.0 0.0 0.18662668283034517 0.0 31 0.0 0.0 0.0 0.1993874816563517 0.0 32 0.0 0.0 0.0 0.23926497798762203 0.0 33 0.0 0.0 0.0 0.2919032731448989 0.0 34 0.0 0.0 0.0 0.3429464684489249 0.0 35 0.0 0.0 0.0 0.4514132584699802 0.0 36 0.0 0.0 0.0 0.547119249665029 0.0 37 0.0 0.0 0.0 0.8342372232501755 0.0 38 0.0 0.0 0.0 1.0591463025585401 0.0 39 0.0 0.0 0.0 1.3303132776111786 0.0 40 0.0 0.0 0.0 1.633382249728833 0.0 41 0.0 0.0 0.0 2.009825815096025 0.0 42 0.0 0.0 0.0 2.4070056785554774 0.0 43 0.0 0.0 0.0 2.7276207490588913 0.0 44 0.0 0.0 0.0 3.1184202131053405 0.0 45 0.0 0.0 0.0 3.429464684489249 0.0 46 0.0 0.0 0.0 3.7676258533784215 0.0 47 0.0 0.0 0.0 4.198302813756142 0.0 48 0.0 0.0 0.0 4.443948191156767 0.0 49 0.0 0.0 0.0 4.731066164741913 0.0 50 0.0 0.0 0.0 5.147387226440375 0.0 51 0.0 0.0 0.0 5.54935238945958 0.0 52 0.0 0.0 0.0 5.927391054680023 0.0 53 0.0 0.0 0.0 6.3819945128565045 0.0 54 0.0 0.0 0.0 6.820646972500478 0.0 55 0.0 0.0 0.0 7.169973840362407 0.0 56 0.0 0.0 0.0 7.535251706756843 0.0 57 0.0 0.0 0.0 7.78408728386397 0.0 58 0.0 0.0 0.0 8.013781662732088 0.0 59 0.0 0.0 0.0 8.420532125311045 0.0 60 0.0 0.0 0.0 8.659797103298667 0.0 61 0.0 0.0 0.0 8.876730683340778 0.0 62 0.0 0.0 0.0 9.036240668665858 0.0 63 0.0 0.0 0.0 9.227652651055957 0.0 64 0.0 0.0 0.0 9.465322529190328 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCATGTG 15 0.0022157726 69.994415 32 CTTGGTT 15 0.0022157726 69.994415 28 GTAGATT 20 7.8734556E-5 69.994415 38 ACGTGTA 15 0.0022157726 69.994415 34 CGTACCA 15 0.0022157726 69.994415 56 CGTGTAT 20 7.8734556E-5 69.994415 35 GCGTGTA 15 0.0022157726 69.994415 34 TTTGAGC 15 0.0022157726 69.994415 26 CGACTTG 15 0.0022157726 69.994415 25 TCGCGTA 20 7.8734556E-5 69.994415 34 ACGACTT 25 2.8110753E-6 69.994415 24 TCATTAA 45 3.765308E-10 62.21726 60 ACGCTTC 45 3.765308E-10 62.21726 15 CTCTCGG 40 1.0461008E-8 61.245113 42 GACGACT 35 2.9320654E-7 59.995213 23 TCGCTGG 30 8.292283E-6 58.328682 45 CACGTGT 30 8.292283E-6 58.328682 33 TGTGTAG 30 8.292283E-6 58.328682 35 AAGTGTA 30 8.292283E-6 58.328682 34 GCCGTAT 60 1.8189894E-12 58.328682 54 >>END_MODULE