##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779734_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 108406 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.029407966348725 34.0 23.0 34.0 12.0 34.0 2 27.495747467852333 33.0 23.0 34.0 12.0 34.0 3 26.412191207128757 32.0 21.0 34.0 11.0 34.0 4 28.79122926775271 33.0 23.0 34.0 12.0 34.0 5 28.39601129088796 34.0 23.0 34.0 11.0 34.0 6 30.769514602512775 36.0 26.0 38.0 11.0 38.0 7 31.567136505359482 37.0 27.0 38.0 12.0 38.0 8 30.903058871280187 36.0 26.0 38.0 11.0 38.0 9 32.377792742099146 37.0 31.0 38.0 12.0 38.0 10-11 32.062699481578505 37.0 31.0 38.0 11.0 38.0 12-13 31.107544785343983 35.5 27.0 38.0 11.0 38.0 14-15 31.148183679870115 36.5 26.5 38.0 11.0 38.0 16-17 30.793355533826542 35.5 26.5 38.0 11.0 38.0 18-19 31.330848846004834 36.5 27.5 38.0 11.5 38.0 20-21 30.206303156651845 35.0 24.5 38.0 11.0 38.0 22-23 30.21049572901869 35.5 26.0 38.0 11.0 38.0 24-25 31.45415382912385 36.5 28.5 38.0 11.0 38.0 26-27 29.992366658672026 35.0 24.0 38.0 11.0 38.0 28-29 32.16645757614892 37.0 31.0 38.0 11.0 38.0 30-31 32.66975536409424 37.0 31.5 38.0 11.0 38.0 32-33 32.774325221851186 37.0 32.5 38.0 11.0 38.0 34-35 32.87266387469329 37.0 34.0 38.0 11.0 38.0 36-37 30.603518255447117 36.0 25.0 38.0 11.0 38.0 38-39 28.767964872793016 34.0 22.0 37.5 11.0 38.0 40-41 30.026760511410806 35.0 24.5 37.5 11.0 38.0 42-43 31.141818718521115 36.0 28.0 38.0 11.0 38.0 44-45 32.878673689648174 37.0 33.5 38.0 11.0 38.0 46-47 31.416854233160528 36.5 28.5 38.0 11.0 38.0 48-49 30.78455989520875 35.5 27.0 38.0 11.0 38.0 50-51 28.508989354832757 34.0 21.5 37.5 11.0 38.0 52-53 31.974955260778927 36.5 29.0 38.0 11.0 38.0 54-55 30.999423463645925 36.5 27.0 38.0 11.0 38.0 56-57 31.474918362452264 36.5 28.5 38.0 11.0 38.0 58-59 32.62060218069111 37.0 32.0 38.0 11.0 38.0 60-61 33.14517185395643 37.5 34.0 38.0 11.0 38.0 62-63 33.01916868070033 38.0 34.0 38.0 11.0 38.0 64-65 32.70332361677398 37.5 32.5 38.0 11.0 38.0 66-67 30.477902514620965 36.5 24.5 38.0 11.0 38.0 68-69 30.57556316071066 36.0 25.0 38.0 11.0 38.0 70-71 30.06717340368614 35.0 24.0 38.0 11.0 38.0 72-73 28.81227515082191 34.0 22.0 37.5 11.0 38.0 74-75 31.086240613988156 35.5 28.0 37.5 11.0 38.0 76 31.421019131782373 36.0 27.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 0.0 9 0.0 10 0.0 11 8.0 12 30.0 13 179.0 14 463.0 15 816.0 16 1350.0 17 2085.0 18 2690.0 19 2962.0 20 2625.0 21 2119.0 22 1831.0 23 1651.0 24 1731.0 25 1871.0 26 2152.0 27 2478.0 28 2897.0 29 3604.0 30 4395.0 31 5515.0 32 7073.0 33 9215.0 34 12222.0 35 14618.0 36 14817.0 37 7008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.8040698854307 19.36608674796598 11.256757006069774 29.57308636053355 2 20.627087061601756 17.749017582052655 38.42499492648008 23.198900429865503 3 19.806099293397043 17.084847702156708 37.57356603878014 25.535486965666106 4 14.538863162555579 18.46761249377341 32.5904470232275 34.40307732044352 5 14.065642123129715 29.39320701806173 39.265354316181764 17.275796542626793 6 27.424681290703468 33.951995277014184 16.758297511207868 21.86502592107448 7 27.664520413999227 25.48567422467391 19.931553604044055 26.918251757282807 8 23.90203403902034 31.702412250357455 18.27037498270375 26.125178727918453 9 23.568806154640885 16.045237348486246 19.686179731749164 40.6997767651237 10-11 24.98039758313731 23.289054932890547 26.663438033301045 25.067109450671094 12-13 24.410774410774412 19.3404363267377 29.365342926986767 26.883446335501134 14-15 23.991052073243853 22.409021724090216 23.343941700106082 30.255984502559848 16-17 25.53768524369376 22.643893934292393 25.69358283097104 26.12483799104281 18-19 22.215662489449336 22.799581202060782 27.823772779056412 27.16098352943347 20-21 25.197983497147288 22.378477106788864 26.570607579873716 25.85293181619014 22-23 25.926848392601816 21.40307181403072 27.01120797011208 25.658871823255385 24-25 22.614627486612765 24.972441435167035 24.174050209629584 28.238880868590616 26-27 23.949541072828744 23.82823670494903 26.68742216687422 25.534800055348 28-29 23.57721702312152 24.253381977851678 25.826641637186302 26.342759361840496 30-31 23.221607759753887 24.372379630184817 25.9198103417262 26.486202268335095 32-33 23.009796505728467 24.337213807353837 25.841281847868196 26.811707839049497 34-35 23.600739814861793 24.05274640124348 25.86492382766557 26.481589956229158 36-37 24.895877054208505 21.73552079922144 29.51879747798774 23.849804668582316 38-39 24.478575711452425 20.8039297080393 33.00770259674369 21.709791983764585 40-41 23.767463527805578 23.35742519913841 25.109658731879215 27.765452541176792 42-43 21.600280427282623 23.990830765824768 26.49345977159936 27.91542903529325 44-45 21.703896055975534 22.613913629046763 28.387197948424653 27.29499236655305 46-47 24.020109773534433 21.556201282228677 28.750980120843135 25.67270882339375 48-49 23.986329106918006 21.966597635728817 29.209311335679462 24.837761921673714 50-51 26.329505096628385 20.35238227019049 30.30994880309949 23.00816383008164 52-53 20.84313454176468 23.481850468151837 28.401826484018265 27.273188506065217 54-55 22.91545592915456 22.535860892025276 28.13938471472718 26.409298464092984 56-57 22.68012231851705 22.637227815931848 27.79333151915724 26.889318346393864 58-59 20.560859738941932 23.745214704118816 27.913380379133805 27.78054517780545 60-61 20.63225574348165 23.09753656410422 27.98289754671119 28.28731014570294 62-63 20.567778239011115 23.896038005627044 27.72427471057608 27.81190904478576 64-65 20.899866242331996 24.236889442368895 26.859000968590006 28.004243346709103 66-67 19.56044462893778 25.54725335547253 23.56902356902357 31.323278446566118 68-69 20.02924785946265 25.450250959551223 23.750738116327135 30.76976306465899 70-71 20.203035851832716 25.464348804708294 23.014727248407585 31.317888095051405 72-73 19.528158295281585 26.05829989391633 21.5967898159679 32.816751994834185 74-75 21.62446381624464 24.434758544347584 23.912181172455146 30.028596466952635 76 21.81910428485771 23.2784465661178 25.067109450671094 29.835339698353398 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.5 12 1.0 13 0.5 14 1.0 15 3.0 16 2.5 17 1.0 18 8.0 19 14.5 20 18.5 21 23.0 22 34.0 23 54.5 24 87.5 25 111.0 26 149.0 27 228.0 28 355.5 29 442.0 30 528.0 31 735.0 32 1034.0 33 1212.0 34 1400.5 35 1859.5 36 2450.0 37 2770.0 38 3112.0 39 3831.5 40 4483.0 41 5059.0 42 5361.0 43 5612.5 44 6024.5 45 6265.0 46 6345.0 47 6205.0 48 6051.0 49 5818.0 50 5599.0 51 5265.0 52 4672.5 53 4094.0 54 3774.0 55 3547.5 56 3123.5 57 2712.0 58 2498.0 59 2372.0 60 2143.0 61 1962.5 62 1885.0 63 1828.5 64 1742.5 65 1669.0 66 1602.5 67 1580.0 68 1539.5 69 1460.0 70 1342.0 71 1263.0 72 1190.0 73 1036.0 74 892.5 75 830.0 76 768.5 77 609.5 78 447.5 79 383.0 80 325.0 81 234.5 82 165.0 83 128.0 84 99.0 85 56.0 86 36.0 87 30.0 88 22.0 89 8.0 90 2.5 91 4.0 92 5.0 93 3.5 94 1.0 95 0.5 96 1.0 97 1.5 98 1.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 9.224581665221482E-4 9 0.0 10-11 9.224581665221482E-4 12-13 9.224581665221482E-4 14-15 9.224581665221482E-4 16-17 0.0013836872497832223 18-19 4.612290832610741E-4 20-21 4.612290832610741E-4 22-23 9.224581665221482E-4 24-25 4.612290832610741E-4 26-27 9.224581665221482E-4 28-29 4.612290832610741E-4 30-31 4.612290832610741E-4 32-33 0.0 34-35 4.612290832610741E-4 36-37 4.612290832610741E-4 38-39 9.224581665221482E-4 40-41 0.0013836872497832223 42-43 0.0 44-45 0.0013836872497832223 46-47 9.224581665221482E-4 48-49 4.612290832610741E-4 50-51 9.224581665221482E-4 52-53 9.224581665221482E-4 54-55 9.224581665221482E-4 56-57 4.612290832610741E-4 58-59 9.224581665221482E-4 60-61 4.612290832610741E-4 62-63 9.224581665221482E-4 64-65 9.224581665221482E-4 66-67 9.224581665221482E-4 68-69 0.02029407966348726 70-71 0.0013836872497832223 72-73 9.224581665221482E-4 74-75 9.224581665221482E-4 76 9.224581665221482E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 108406.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 95.94273037779244 #Duplication Level Percentage of deduplicated Percentage of total 1 97.04213876742229 93.10487755047116 2 2.229856084139794 4.2787696212380855 3 0.45201563726316085 1.301028432374564 4 0.15499431754826712 0.5948231207449334 5 0.058997660281648094 0.2830198306661378 6 0.03199872697180092 0.18420271405728542 7 0.010999562338368227 0.0738729630592648 8 0.006999721486496868 0.05372579130388876 9 0.001999920424694722 0.01726900434751733 >10 0.009999602123469606 0.10841097173714857 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0018449163330442964 0.0 10 0.0 0.0 0.0 0.0027673744995664446 0.0 11 0.0 0.0 0.0 0.005534748999132889 0.0 12 0.0 0.0 0.0 0.005534748999132889 0.0 13 0.0 0.0 0.0 0.005534748999132889 0.0 14 0.0 0.0 0.0 0.008302123498699333 0.0 15 0.0 0.0 0.0 0.008302123498699333 0.0 16 0.0 0.0 0.0 0.009224581665221483 0.0 17 0.0 0.0 0.0 0.01014703983174363 0.0 18 0.0 0.0 0.0 0.011069497998265778 0.0 19 0.0 0.0 0.0 0.013836872497832223 0.0 20 0.0 0.0 0.0 0.01568178883087652 0.0 21 0.0 0.0 0.0 0.02029407966348726 0.0 22 0.0 0.0 0.0 0.03689832666088593 0.0 23 0.0 0.0 0.0 0.037820784827408076 0.0 24 0.0 0.0 0.0 0.048890282825673856 0.0 25 0.0 0.0 0.0 0.0516576573252403 0.0 26 0.0 0.0 0.0 0.05442503182480674 0.0 27 0.0 0.0 0.0 0.0728741951552497 0.0 28 0.0 0.0 0.0 0.09593564931830341 0.0 29 0.0 0.0 0.0 0.11622972898179068 0.0 30 0.0 0.0 0.0 0.14667084847702155 0.0 31 0.0 0.0 0.0 0.16143017914137595 0.0 32 0.0 0.0 0.0 0.19925096396878403 0.0 33 0.0 0.0 0.0 0.22692470896444847 0.0 34 0.0 0.0 0.0 0.2619781192922901 0.0 35 0.0 0.0 0.0 0.33208493994797333 9.224581665221482E-4 36 9.224581665221482E-4 0.0 0.0 0.385587513606258 9.224581665221482E-4 37 9.224581665221482E-4 0.0 0.0 0.5885283102411306 9.224581665221482E-4 38 9.224581665221482E-4 0.0 0.0 0.796081397708614 9.224581665221482E-4 39 9.224581665221482E-4 0.0 0.0 1.039610353670461 9.224581665221482E-4 40 9.224581665221482E-4 0.0 0.0 1.4012139549471432 9.224581665221482E-4 41 9.224581665221482E-4 0.0 0.0 1.8532184565429959 9.224581665221482E-4 42 9.224581665221482E-4 0.0 0.0 2.328284412301902 9.224581665221482E-4 43 9.224581665221482E-4 0.0 0.0 2.819032156891685 9.224581665221482E-4 44 9.224581665221482E-4 0.0 0.0 3.2950205708171136 9.224581665221482E-4 45 9.224581665221482E-4 0.0 0.0 3.6003542239359443 9.224581665221482E-4 46 9.224581665221482E-4 0.0 0.0 4.000701068206557 9.224581665221482E-4 47 9.224581665221482E-4 0.0 0.0 4.532959430289837 9.224581665221482E-4 48 9.224581665221482E-4 0.0 0.0 4.889028282567385 9.224581665221482E-4 49 9.224581665221482E-4 0.0 0.0 5.26908104717451 9.224581665221482E-4 50 9.224581665221482E-4 0.0 0.0 5.7450694610999395 9.224581665221482E-4 51 9.224581665221482E-4 0.0 0.0 6.3382100621736805 9.224581665221482E-4 52 9.224581665221482E-4 0.0 0.0 6.925815914248289 9.224581665221482E-4 53 9.224581665221482E-4 0.0 0.0 7.667472280132096 9.224581665221482E-4 54 9.224581665221482E-4 0.0 0.0 8.335331992694131 9.224581665221482E-4 55 9.224581665221482E-4 0.0 0.0 8.746748334963009 9.224581665221482E-4 56 9.224581665221482E-4 0.0 0.0 9.20613250189104 9.224581665221482E-4 57 9.224581665221482E-4 0.0 0.0 9.552976772503367 9.224581665221482E-4 58 9.224581665221482E-4 0.0 0.0 9.91919266461266 9.224581665221482E-4 59 9.224581665221482E-4 0.0 0.0 10.322306883382838 9.224581665221482E-4 60 9.224581665221482E-4 0.0 0.0 10.587052377174695 9.224581665221482E-4 61 9.224581665221482E-4 0.0 0.0 10.852720329133074 9.224581665221482E-4 62 9.224581665221482E-4 0.0 0.0 11.045514085936203 9.224581665221482E-4 63 9.224581665221482E-4 0.0 0.0 11.342545615556334 9.224581665221482E-4 64 9.224581665221482E-4 0.0 0.0 11.6368097706769 9.224581665221482E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGGA 15 0.0022121528 70.05817 66 TTCGGAA 15 0.0022121528 70.05817 67 CGTGTAC 20 7.899927E-5 69.993546 35 GCCGTAT 55 3.45608E-11 57.26744 54 GTCTATC 25 2.3824409E-4 55.994835 38 ACGTGTA 25 2.3824409E-4 55.994835 34 GTAGATC 85 0.0 53.524475 38 TCGGAAT 20 0.0069123874 52.54363 68 CGGAATA 20 0.006937679 52.495155 69 TTAGGCC 20 0.006937679 52.495155 3 CGAGTAA 20 0.006937679 52.495155 10 GACAACT 20 0.006937679 52.495155 15 AGAACTT 20 0.006937679 52.495155 26 CCGTATC 60 8.367351E-11 52.495155 55 GTGTACT 20 0.006937679 52.495155 36 TGAATTG 20 0.006937679 52.495155 32 GAATTAT 20 0.006937679 52.495155 37 TCGGTGG 100 0.0 52.495155 45 ATATTGA 20 0.006937679 52.495155 28 TTCCGAC 55 2.2555469E-9 50.904392 19 >>END_MODULE