SRR1779733_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779733_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	151226
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCCGTA	45	2.6833732E-8	54.442642	53
AACGAGC	20	0.006932254	52.515633	66
ACGGGGT	20	0.006941331	52.498264	44
ATACGCT	20	0.006941331	52.498264	4
GCCGTAT	55	2.2646418E-9	50.90741	54
CCGTATC	70	3.8016879E-10	44.998512	55
TAGATCT	110	0.0	44.543983	39
ATCTCGG	95	0.0	44.209064	42
TCTCGGT	130	0.0	43.075497	43
GTAGATC	85	5.638867E-11	41.17511	38
CGCAGAG	60	2.5805457E-7	40.83198	70
GATCTCG	105	0.0	39.998676	41
TCGGTGG	115	0.0	39.563908	45
CGTTTAG	45	9.1658214E-5	38.887604	35
AGATCTC	120	0.0	37.915413	40
CGTATCA	65	4.834128E-7	37.69106	56
CTCGGTG	155	0.0	36.12784	44
CGACGAT	50	1.7038117E-4	34.998844	22
TTCCGCT	50	1.7038117E-4	34.998844	13
TATCTAT	40	0.0024132077	34.998844	3