##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779733_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 151226 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.571065822014734 34.0 27.0 34.0 12.0 34.0 2 27.874022985465462 34.0 23.0 34.0 12.0 34.0 3 26.759380000793513 32.0 21.0 34.0 11.0 34.0 4 29.22873712192348 34.0 23.0 34.0 12.0 34.0 5 28.73661275177549 34.0 23.0 34.0 11.0 34.0 6 31.10633753455094 36.0 27.0 38.0 11.0 38.0 7 32.07290413024215 37.0 28.0 38.0 12.0 38.0 8 31.264418816870116 37.0 27.0 38.0 11.0 38.0 9 32.82233213865341 37.0 31.0 38.0 21.0 38.0 10-11 32.50023144168331 37.0 31.0 38.0 11.0 38.0 12-13 31.46538293679658 36.0 29.0 38.0 16.0 38.0 14-15 31.58419517807784 36.5 29.0 38.0 11.5 38.0 16-17 31.221049951727878 36.0 27.5 38.0 11.0 38.0 18-19 31.734536389245235 37.0 29.0 38.0 11.5 38.0 20-21 30.615320778173064 35.5 26.5 38.0 11.0 38.0 22-23 30.581110391070318 35.5 26.0 38.0 11.0 38.0 24-25 31.914171504899947 36.5 29.0 38.0 11.0 38.0 26-27 30.385171861981405 35.5 25.0 38.0 11.0 38.0 28-29 32.65745308346449 37.0 31.5 38.0 11.0 38.0 30-31 33.18116593707431 37.0 34.0 38.0 21.0 38.0 32-33 33.28337719704284 38.0 34.0 38.0 21.0 38.0 34-35 33.343525584224935 38.0 34.0 38.0 21.0 38.0 36-37 31.031132212714745 36.5 27.0 38.0 11.0 38.0 38-39 29.071770065993945 34.0 22.5 37.5 11.0 38.0 40-41 30.44163702008914 35.0 25.5 37.5 11.0 38.0 42-43 31.56943911761205 36.5 28.5 38.0 16.0 38.0 44-45 33.35133508788171 37.0 34.0 38.0 21.0 38.0 46-47 31.814664806316372 37.0 29.0 38.0 16.0 38.0 48-49 31.16965006017484 36.0 27.0 38.0 16.0 38.0 50-51 28.80186938753918 34.0 21.5 37.5 11.0 38.0 52-53 32.42787946517133 36.5 32.5 38.0 16.0 38.0 54-55 31.41681324639943 36.5 28.0 38.0 15.0 38.0 56-57 31.862011162101755 36.5 29.0 38.0 16.0 38.0 58-59 33.05658749156891 37.0 33.5 38.0 21.0 38.0 60-61 33.55599896843135 38.0 34.0 38.0 21.0 38.0 62-63 33.43187348736328 38.0 34.0 38.0 20.0 38.0 64-65 33.125305833652945 37.5 33.0 38.0 16.0 38.0 66-67 30.86550262520995 36.5 25.5 38.0 11.0 38.0 68-69 30.975143163212675 36.5 26.0 38.0 11.0 38.0 70-71 30.47871728406491 35.5 25.5 38.0 11.0 38.0 72-73 29.155621387856584 34.0 22.5 37.5 11.0 38.0 74-75 31.46880827370955 36.0 28.0 38.0 14.5 38.0 76 31.85392723473477 37.0 29.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 1.0 5 1.0 6 0.0 7 0.0 8 0.0 9 0.0 10 2.0 11 3.0 12 30.0 13 156.0 14 468.0 15 831.0 16 1359.0 17 2251.0 18 2901.0 19 3279.0 20 3037.0 21 2771.0 22 2462.0 23 2464.0 24 2565.0 25 2838.0 26 3134.0 27 3659.0 28 4314.0 29 5195.0 30 6507.0 31 7976.0 32 10090.0 33 12991.0 34 17028.0 35 20556.0 36 21784.0 37 10573.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.83292555512941 18.258765027177866 11.26393609564493 29.644373322047795 2 20.776189279621228 17.56642376310952 37.98420906457884 23.67317789269041 3 21.084337349397593 16.691574200203668 36.48380569478793 25.740282755610806 4 15.329374578445506 18.21710552418235 31.402668853239526 35.05085104413263 5 15.12570589713409 29.16165209686165 37.95974237234338 17.752899633660878 6 29.46980016663801 31.97267665613056 16.288865671247006 22.26865750598442 7 27.782920926295745 26.664065702987582 19.570708740560487 25.98230463015619 8 24.16894255503462 31.5520787181844 17.92386078837214 26.35511793840884 9 23.631987197714633 15.653042195962255 19.677562275579774 41.03740833074334 10-11 25.813949643736876 23.462447717766864 25.991833225875776 24.731769412620476 12-13 25.100596137505082 19.62922429384322 28.71312990375173 26.557049664899967 14-15 23.969488869124177 22.783826587798853 23.168687406388557 30.07799713668841 16-17 25.320142969088387 23.242726728672842 25.351223205694957 26.08590709654381 18-19 22.790184032852146 23.037170271717926 27.268669448430465 26.903976246999466 20-21 24.89659345273717 22.558001897853178 26.74948007419482 25.79592457521483 22-23 25.33956699422042 22.08772533097036 26.716350795519173 25.85635687929005 24-25 23.765738242606993 24.596624874358568 23.650015870496745 27.987621012537694 26-27 24.47412795503389 23.2640105802612 26.448338568358405 25.8135228963465 28-29 23.86129185843517 24.504708247368143 25.067780246521714 26.56621964767497 30-31 23.53610231247892 24.676140534178 25.183999788391976 26.603757364951097 32-33 23.72985590816212 24.273424016188013 25.339730067516186 26.656990008133686 34-35 23.475848661087728 24.477346444170383 25.643501175412553 26.403303719329337 36-37 24.455355519185307 22.1732877052026 29.1967134520326 24.174643323579495 38-39 24.04767809023128 21.11160706905388 32.2713220585561 22.56939278215874 40-41 23.59701763957083 23.377804228868058 24.884524458992544 28.140653672568565 42-43 21.971307559290988 23.61786615264061 26.01562577492404 28.395200513144363 44-45 22.43350030584073 22.639157532774554 27.88969895352874 27.03764320785597 46-47 23.569088137756367 21.62858285914557 28.894649310457698 25.90767969264036 48-49 23.387976696666513 22.212560258690807 29.077918041567752 25.32154500307493 50-51 25.08712299055038 21.025902144515054 30.780370710804572 23.106604154129993 52-53 20.814762402295962 23.702900371639046 28.311687452883838 27.17064977318115 54-55 22.784052584941346 22.784052584941346 27.755220801206175 26.676674028911133 56-57 22.30737947475095 23.09561675268725 27.448776149209614 27.148227623352188 58-59 20.659555755407577 23.79962042810948 27.997394576221872 27.54342924026107 60-61 20.7994154328376 23.267955271354225 27.976564411498252 27.956064884309928 62-63 21.065248011215225 24.12033883734617 27.259080959906896 27.55533219153171 64-65 21.30356723657368 24.186386375133495 26.35040188859536 28.159644499697468 66-67 20.159698457570798 24.451057217014665 23.616855957281487 31.772388368133047 68-69 20.54295739480986 24.676815011525193 23.722720673587293 31.05750692007765 70-71 20.610757693986326 24.6409252621973 23.228432370951317 31.51988467286506 72-73 20.095752313628505 24.898577271389698 21.803158900567706 33.2025115144141 74-75 22.25554313827923 24.577610548659926 23.504691746625845 29.662154566435 76 22.531113197815134 23.455581859782306 24.15653806985756 29.856766872545 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 1.0 7 0.0 8 0.0 9 0.5 10 0.5 11 0.0 12 0.0 13 0.5 14 4.5 15 9.0 16 12.5 17 15.0 18 26.5 19 55.0 20 91.5 21 111.0 22 141.5 23 232.5 24 350.5 25 408.0 26 501.0 27 682.5 28 919.5 29 1068.0 30 1241.0 31 1688.5 32 2181.5 33 2400.0 34 2649.5 35 3242.0 36 3879.5 37 4174.0 38 4501.0 39 5051.0 40 5638.5 41 6129.5 42 6256.0 43 6376.0 44 6557.5 45 6725.0 46 6831.0 47 6934.5 48 6840.0 49 6570.0 50 6498.0 51 6317.0 52 5964.0 53 5597.5 54 5403.0 55 5278.5 56 4920.5 57 4563.5 58 4440.0 59 4285.5 60 3994.5 61 3667.5 62 3477.0 63 3359.0 64 3123.5 65 2868.5 66 2655.5 67 2580.0 68 2387.0 69 2134.5 70 1996.0 71 1917.0 72 1806.0 73 1584.5 74 1300.5 75 1127.0 76 1059.0 77 876.0 78 668.5 79 576.0 80 533.0 81 389.0 82 241.5 83 195.0 84 162.5 85 105.0 86 60.0 87 40.0 88 37.5 89 26.0 90 12.5 91 5.5 92 3.0 93 2.5 94 2.5 95 2.0 96 1.0 97 0.5 98 1.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.001983785856929364 9 0.001983785856929364 10-11 0.002314416833084258 12-13 0.00165315488077447 14-15 0.00165315488077447 16-17 0.002975678785394046 18-19 0.001983785856929364 20-21 0.00165315488077447 22-23 0.002645047809239152 24-25 0.001322523904619576 26-27 6.61261952309788E-4 28-29 0.001322523904619576 30-31 0.001983785856929364 32-33 0.001983785856929364 34-35 0.00165315488077447 36-37 0.002314416833084258 38-39 0.002314416833084258 40-41 0.002314416833084258 42-43 9.91892928464682E-4 44-45 0.002314416833084258 46-47 0.00165315488077447 48-49 0.001983785856929364 50-51 0.001983785856929364 52-53 0.002645047809239152 54-55 0.002645047809239152 56-57 0.00165315488077447 58-59 0.001983785856929364 60-61 0.001983785856929364 62-63 0.001983785856929364 64-65 0.00165315488077447 66-67 0.002314416833084258 68-69 0.023474799306997474 70-71 0.002645047809239152 72-73 0.00165315488077447 74-75 0.001983785856929364 76 0.002645047809239152 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 151226.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.4531607790878 #Duplication Level Percentage of deduplicated Percentage of total 1 97.62253798125286 95.13624889549641 2 2.1647018511056606 4.219140750691779 3 0.19258341209807534 0.5630358666773718 4 0.01817630203305322 0.07085352337585585 5 0.001001575821892923 0.004880336480168904 6 9.988776884740657E-4 0.0058406272784104025 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.001983785856929364 0.0 5 0.0 0.0 0.0 0.002645047809239152 0.0 6 0.0 0.0 0.0 0.002645047809239152 0.0 7 0.0 0.0 0.0 0.003967571713858728 0.0 8 0.0 0.0 0.0 0.003967571713858728 0.0 9 0.0 0.0 0.0 0.005951357570788092 0.0 10 0.0 0.0 0.0 0.007273881475407668 0.0 11 0.0 0.0 0.0 0.007935143427717456 0.0 12 0.0 0.0 0.0 0.008596405380027244 0.0 13 0.0 0.0 0.0 0.009257667332337032 0.0 14 0.0 0.0 0.0 0.010580191236956608 0.0 15 0.0 0.0 0.0 0.010580191236956608 0.0 16 0.0 0.0 0.0 0.011241453189266396 0.0 17 0.0 0.0 0.0 0.011241453189266396 0.0 18 0.0 0.0 0.0 0.011241453189266396 0.0 19 0.0 0.0 0.0 0.011902715141576184 0.0 20 0.0 0.0 0.0 0.013886500998505549 0.0 21 0.0 0.0 0.0 0.01587028685543491 0.0 22 0.0 0.0 0.0 0.022482906378532792 0.0 23 0.0 0.0 0.0 0.025127954187771945 0.0 24 0.0 0.0 0.0 0.028434263949320884 0.0 25 0.0 0.0 0.0 0.033724359567799185 0.0 26 0.0 0.0 0.0 0.03835319323396771 0.0 27 0.0 0.0 0.0 0.08530279184796265 0.0 28 0.0 0.0 0.0 0.11043074603573459 0.0 29 0.0 0.0 0.0 0.13489743827119674 0.0 30 0.0 0.0 0.0 0.16134791636358828 0.0 31 0.0 0.0 0.0 0.1719281076005449 0.0 32 0.0 0.0 0.0 0.20102363350217556 0.0 33 0.0 0.0 0.0 0.22152275402377897 0.0 34 0.0 0.0 0.0 0.2539245896869586 0.0 35 0.0 0.0 0.0 0.3260021424887255 0.0 36 0.0 0.0 0.0 0.4033697909089707 0.0 37 0.0 0.0 0.0 0.6321664264081573 0.0 38 0.0 0.0 0.0 0.87352703900123 0.0 39 0.0 0.0 0.0 1.1367092960205256 0.0 40 0.0 0.0 0.0 1.5109835610278657 0.0 41 0.0 0.0 0.0 1.993704786214011 0.0 42 0.0 0.0 0.0 2.5961144247682277 0.0 43 0.0 0.0 0.0 3.228280851176385 0.0 44 0.0 0.0 0.0 3.814820202875167 0.0 45 0.0 0.0 0.0 4.184465634216338 0.0 46 0.0 0.0 0.0 4.6123021173607714 0.0 47 0.0 0.0 0.0 5.074524222025313 0.0 48 0.0 0.0 0.0 5.403171412323278 0.0 49 0.0 0.0 0.0 5.665692407390264 0.0 50 0.0 0.0 0.0 6.121963154484018 0.0 51 0.0 0.0 0.0 6.70453493446894 0.0 52 0.0 0.0 0.0 7.29967069154775 0.0 53 0.0 0.0 0.0 8.152037348075066 0.0 54 0.0 0.0 0.0 8.79875153743404 0.0 55 0.0 0.0 0.0 9.272215095287848 0.0 56 0.0 0.0 0.0 9.749646224855514 0.0 57 0.0 0.0 0.0 10.145080872336768 0.0 58 0.0 0.0 0.0 10.44529379868541 0.0 59 0.0 0.0 0.0 10.809649134408104 0.0 60 0.0 0.0 0.0 11.04307460357346 0.0 61 0.0 0.0 0.0 11.29038657373732 0.0 62 0.0 0.0 0.0 11.4510732281486 0.0 63 0.0 0.0 0.0 11.751947416449552 0.0 64 0.0 0.0 0.0 12.013145887611918 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCCGTA 45 2.6833732E-8 54.442642 53 AACGAGC 20 0.006932254 52.515633 66 ACGGGGT 20 0.006941331 52.498264 44 ATACGCT 20 0.006941331 52.498264 4 GCCGTAT 55 2.2646418E-9 50.90741 54 CCGTATC 70 3.8016879E-10 44.998512 55 TAGATCT 110 0.0 44.543983 39 ATCTCGG 95 0.0 44.209064 42 TCTCGGT 130 0.0 43.075497 43 GTAGATC 85 5.638867E-11 41.17511 38 CGCAGAG 60 2.5805457E-7 40.83198 70 GATCTCG 105 0.0 39.998676 41 TCGGTGG 115 0.0 39.563908 45 CGTTTAG 45 9.1658214E-5 38.887604 35 AGATCTC 120 0.0 37.915413 40 CGTATCA 65 4.834128E-7 37.69106 56 CTCGGTG 155 0.0 36.12784 44 CGACGAT 50 1.7038117E-4 34.998844 22 TTCCGCT 50 1.7038117E-4 34.998844 13 TATCTAT 40 0.0024132077 34.998844 3 >>END_MODULE