##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779732_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 97660 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.054300634855622 34.0 31.0 34.0 21.0 34.0 2 28.325414704075364 34.0 23.0 34.0 12.0 34.0 3 27.37444194142945 33.0 23.0 34.0 11.0 34.0 4 29.88362686872824 34.0 31.0 34.0 21.0 34.0 5 29.347982797460578 34.0 27.0 34.0 11.0 34.0 6 31.95738275650215 37.0 28.0 38.0 12.0 38.0 7 33.00281589186975 37.0 32.0 38.0 21.0 38.0 8 32.18035019455253 37.0 31.0 38.0 11.0 38.0 9 33.661560516076186 37.0 34.0 38.0 21.0 38.0 10-11 33.391030104443985 38.0 34.0 38.0 21.0 38.0 12-13 32.317801556420235 37.5 30.0 38.0 16.0 38.0 14-15 32.45273909481876 37.0 32.0 38.0 11.5 38.0 16-17 32.09932418595126 37.5 29.5 38.0 16.0 38.0 18-19 32.59289371288143 37.0 32.0 38.0 16.0 38.0 20-21 31.565538603317634 36.5 28.5 38.0 16.0 38.0 22-23 31.52646938357567 36.5 28.5 38.0 16.0 38.0 24-25 32.855964570960474 37.0 32.5 38.0 16.5 38.0 26-27 31.30146938357567 37.0 27.5 38.0 11.0 38.0 28-29 33.51943989350809 37.5 34.0 38.0 21.0 38.0 30-31 33.94493139463445 38.0 35.0 38.0 21.0 38.0 32-33 34.034507474912964 38.0 35.0 38.0 21.0 38.0 34-35 34.101034200286705 38.0 36.0 38.0 21.0 38.0 36-37 31.89282715543723 37.0 29.0 38.0 16.0 38.0 38-39 30.025747491296336 35.0 24.0 38.0 11.0 38.0 40-41 31.428578742576285 36.5 28.5 38.0 11.0 38.0 42-43 32.509246364939585 37.0 30.5 38.0 16.0 38.0 44-45 34.125517100143355 38.0 35.5 38.0 21.5 38.0 46-47 32.626315789473686 37.5 31.0 38.0 16.0 38.0 48-49 31.98441019864837 36.5 29.5 38.0 16.0 38.0 50-51 29.789739913987304 35.0 23.5 38.0 11.0 38.0 52-53 33.271057751382344 37.0 33.5 38.0 21.0 38.0 54-55 32.305565226295315 37.0 30.0 38.0 16.0 38.0 56-57 32.7431855416752 37.5 31.0 38.0 16.0 38.0 58-59 33.85601576899447 38.0 35.0 38.0 21.0 38.0 60-61 34.317939791112025 38.0 36.0 38.0 22.0 38.0 62-63 34.210731107925454 38.0 36.0 38.0 21.5 38.0 64-65 33.905293876715135 38.0 35.0 38.0 16.5 38.0 66-67 31.89638541879992 37.0 28.0 38.0 11.0 38.0 68-69 31.91555908253123 37.0 29.0 38.0 11.0 38.0 70-71 31.42099119393815 37.0 27.0 38.0 11.0 38.0 72-73 30.238925865246774 35.5 24.5 38.0 11.0 38.0 74-75 32.389509522834324 37.0 30.5 38.0 16.0 38.0 76 32.9136289166496 37.0 33.0 38.0 19.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 6.0 12 23.0 13 129.0 14 439.0 15 742.0 16 1161.0 17 1688.0 18 1962.0 19 2085.0 20 1791.0 21 1418.0 22 1121.0 23 989.0 24 844.0 25 949.0 26 1001.0 27 1285.0 28 1646.0 29 2064.0 30 2729.0 31 3870.0 32 5282.0 33 7649.0 34 11266.0 35 15868.0 36 19086.0 37 10567.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.60557034609871 17.769813639156258 11.626049559696908 28.998566455048124 2 22.584476756092567 17.08171206225681 37.39913987302887 22.93467130862175 3 21.248208068810158 17.269096866680318 34.70612328486586 26.77657177964366 4 14.637517919311898 18.758959655949212 32.62031537988941 33.98320704484948 5 14.930370673766127 29.33647347941839 38.07188203972968 17.66127380708581 6 28.914601679295515 32.05304116321933 16.777595740323573 22.254761417161582 7 28.458939176735615 26.059799303706736 20.123899242269097 25.35736227728855 8 24.25967642842515 31.507270120827357 17.84456276878968 26.388490681957812 9 23.475322547614173 16.903542903952488 19.379479827974606 40.24165472045873 10-11 25.4500307188204 23.358079049764488 26.224656973172227 24.96723325824288 12-13 25.062973581814457 19.83207044849478 28.2454433749744 26.85951259471636 14-15 24.044132705304115 22.164140896989558 23.3852140077821 30.406512389924227 16-17 25.079868933032973 23.221380298996518 25.62000819168544 26.07874257628507 18-19 23.17376612738071 22.990989146016794 26.97214826950645 26.86309645709605 20-21 24.2806676223633 23.063690354290394 26.8943272578333 25.761314765513006 22-23 24.950849887364328 22.131886135572394 27.370468973991397 25.546795003071882 24-25 23.33350399344665 24.517202539422485 23.799406102805655 28.34988736432521 26-27 23.51986483719025 23.61714110178169 27.173356543108746 25.689637517919312 28-29 23.697522015154618 24.335961499078433 25.711652672537376 26.254863813229573 30-31 23.67909072291624 24.250972762645915 25.5954331353676 26.474503379070242 32-33 23.639156256399755 24.36156051607618 25.552426786811388 26.44685644071268 34-35 23.78967847634651 24.253020684005737 25.523243907433958 26.4340569322138 36-37 24.357464673356542 22.157485152570143 29.334937538398524 24.150112635674787 38-39 24.1045463854188 21.108949416342412 32.31978292033586 22.46672127790293 40-41 23.996518533688306 23.032459553553146 25.16127380708581 27.809748105672742 42-43 22.14468564407127 23.371902518943273 26.137620315379888 28.34579152160557 44-45 21.78681138644276 22.992525087036658 28.011468359614987 27.20919516690559 46-47 23.545975834527955 21.889719434773706 28.855211959860743 25.7090927708376 48-49 23.757423714929345 22.263465082940815 29.00419823878763 24.97491296334221 50-51 24.438357567069424 21.01013721073111 31.16117141101782 23.39033381118165 52-53 21.159123489657997 23.66373131271759 28.150727012082736 27.026418185541672 54-55 22.684824902723737 22.7329510546795 28.42822035633832 26.15400368625845 56-57 22.626971124308824 23.068298177349988 27.401187794388694 26.903542903952488 58-59 20.918492729879173 23.993958631988534 27.793364734794185 27.29418390333811 60-61 20.990169977472863 23.175814048740527 27.71451976244112 28.119496211345485 62-63 20.711652672537376 24.03696498054475 27.308007372516897 27.94337497440098 64-65 21.33217284456277 24.403030923612533 26.545156665984027 27.71963956584067 66-67 20.581097685848864 24.115297972557855 23.44613966823674 31.857464673356546 68-69 20.577421370121158 24.530166630821068 23.86190227465921 31.030509724398563 70-71 20.80534507474913 24.320602088879788 23.197317223018636 31.67673561335245 72-73 20.384497235306164 23.921257423714927 22.20817120622568 33.486074134753224 74-75 21.967028466106903 24.415830432111406 23.896170387057136 29.720970714724555 76 22.372516895351218 23.08724144992832 24.90579561744829 29.634446037272166 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.5 16 2.5 17 4.0 18 5.0 19 10.0 20 23.5 21 33.0 22 38.0 23 58.5 24 96.5 25 119.0 26 148.0 27 241.5 28 372.5 29 439.0 30 533.5 31 740.5 32 1006.5 33 1160.0 34 1355.5 35 1769.0 36 2205.5 37 2424.0 38 2779.0 39 3452.0 40 4100.5 41 4660.0 42 4889.0 43 5046.0 44 5398.0 45 5619.0 46 5645.0 47 5493.0 48 5250.0 49 4934.0 50 4709.0 51 4484.0 52 3925.0 53 3408.0 54 3225.0 55 2997.5 56 2578.0 57 2174.0 58 1962.0 59 1895.5 60 1777.5 61 1692.0 62 1658.0 63 1644.5 64 1618.5 65 1602.0 66 1612.0 67 1626.0 68 1574.5 69 1489.5 70 1397.0 71 1338.0 72 1287.5 73 1180.0 74 1038.5 75 954.0 76 846.0 77 646.5 78 489.5 79 424.0 80 350.5 81 237.0 82 156.5 83 116.0 84 92.5 85 57.5 86 31.0 87 16.0 88 14.0 89 9.0 90 6.0 91 4.0 92 2.0 93 2.5 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.019455252918287938 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 97660.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 95.22629531026008 #Duplication Level Percentage of deduplicated Percentage of total 1 96.49132239402998 91.88511161171411 2 2.6269382137250266 5.0030718820397295 3 0.5559259338910514 1.5881630145402417 4 0.188176089808383 0.7167724759369241 5 0.06989397621454226 0.3327872209707147 6 0.03225875825286566 0.18431292238378047 7 0.015054087184670637 0.10034814663116935 8 0.005376459708810942 0.040958427196395655 9 0.004301167767048753 0.0368625844767561 >10 0.010752919417621885 0.11161171411017817 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.005119803399549457 0.0 2 0.0 0.0 0.0 0.005119803399549457 0.0 3 0.0 0.0 0.0 0.005119803399549457 0.0 4 0.0 0.0 0.0 0.011263567479008805 0.0 5 0.0 0.0 0.0 0.011263567479008805 0.0 6 0.0 0.0 0.0 0.011263567479008805 0.0 7 0.0 0.0 0.0 0.011263567479008805 0.0 8 0.0 0.0 0.0 0.011263567479008805 0.0 9 0.0 0.0 0.0 0.015359410198648372 0.0 10 0.0 0.0 0.0 0.015359410198648372 0.0 11 0.0 0.0 0.0 0.016383370878558262 0.0 12 0.0 0.0 0.0 0.016383370878558262 0.0 13 0.0 0.0 0.0 0.016383370878558262 0.0 14 0.0 0.0 0.0 0.018431292238378045 0.0 15 0.0 0.0 0.0 0.018431292238378045 0.0 16 0.0 0.0 0.0 0.018431292238378045 0.0 17 0.0 0.0 0.0 0.018431292238378045 0.0 18 0.0 0.0 0.0 0.018431292238378045 0.0 19 0.0 0.0 0.0 0.02150317427810772 0.0 20 0.0 0.0 0.0 0.023551095637927504 0.0 21 0.0 0.0 0.0 0.02662297767765718 0.0 22 0.0 0.0 0.0 0.04300634855621544 0.0 23 0.0 0.0 0.0 0.04300634855621544 0.0 24 0.0 0.0 0.0 0.05529387671513414 0.0 25 0.0 0.0 0.0 0.05529387671513414 0.0 26 0.0 0.0 0.0 0.058365758754863814 0.0 27 0.0 0.0 0.0 0.0839647757526111 0.0 28 0.0 0.0 0.0 0.11570755682981773 0.0 29 0.0 0.0 0.0 0.14130657382756504 0.0 30 0.0 0.0 0.0 0.17202539422486177 0.0 31 0.0 0.0 0.0 0.1914806471431497 0.0 32 0.0 0.0 0.0 0.2181036248208069 0.0 33 0.0 0.0 0.0 0.24472660249846406 0.0 34 0.0 0.0 0.0 0.2856850296948597 0.0 35 0.0 0.0 0.0 0.35633831660864224 0.0 36 0.0 0.0 0.0 0.4515666598402621 0.0 37 0.0 0.0 0.0 0.6747900880606185 0.0 38 0.0 0.0 0.0 0.9174687691992628 0.0 39 0.0 0.0 0.0 1.2328486586115093 0.0 40 0.0 0.0 0.0 1.6076182674585295 0.0 41 0.0 0.0 0.0 2.085807904976449 0.0 42 0.0 0.0 0.0010239606799098914 2.584476756092566 0.0 43 0.0 0.0 0.0010239606799098914 3.124104034405079 0.0 44 0.0 0.0 0.0010239606799098914 3.6821626049559697 0.0 45 0.0 0.0 0.0010239606799098914 4.032357157485152 0.0 46 0.0 0.0 0.0010239606799098914 4.477780053245955 0.0 47 0.0 0.0 0.0010239606799098914 5.038910505836576 0.0 48 0.0 0.0 0.0010239606799098914 5.429039524882245 0.0 49 0.0 0.0 0.0010239606799098914 5.760802785173049 0.0 50 0.0 0.0 0.0010239606799098914 6.258447675609257 0.0 51 0.0 0.0 0.0010239606799098914 6.8840876510342 0.0 52 0.0 0.0 0.0010239606799098914 7.367397091951669 0.0 53 0.0 0.0 0.0010239606799098914 8.11488838828589 0.0 54 0.0 0.0 0.0010239606799098914 8.865451566659841 0.0 55 0.0 0.0 0.0010239606799098914 9.310874462420642 0.0 56 0.0 0.0 0.0010239606799098914 9.676428425148474 0.0 57 0.0 0.0 0.0010239606799098914 10.08601269711243 0.0 58 0.0 0.0 0.0010239606799098914 10.415728036043417 0.0 59 0.0 0.0 0.0010239606799098914 10.817120622568094 0.0 60 0.0 0.0 0.0010239606799098914 11.090518124104035 0.0 61 0.0 0.0 0.0010239606799098914 11.378251075158714 0.0 62 0.0 0.0 0.0010239606799098914 11.586115093180421 0.0 63 0.0 0.0 0.0010239606799098914 11.878967847634652 0.0 64 0.0 0.0 0.0010239606799098914 12.183084169567888 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCCGT 15 0.0022192467 69.996414 52 TAGATCT 60 0.0 64.16338 39 GTAGATC 65 0.0 59.227737 38 CGACTAG 25 2.3807831E-4 55.99713 22 AGATCTC 55 2.2519089E-9 50.906483 40 CGCCGTA 45 1.6704671E-6 46.66428 53 GCCGTAT 45 1.6704671E-6 46.66428 54 CGTATCC 30 5.8543455E-4 46.664276 56 CACGTGT 30 5.8543455E-4 46.664276 33 TATCGTG 30 5.8543455E-4 46.664276 37 ATCTCGG 70 3.765308E-10 44.997696 42 TGGTCGC 55 1.2966848E-7 44.54317 49 GGTGGTC 100 0.0 41.99785 47 GACGCTT 50 3.4493787E-6 41.99785 14 GATCTCG 100 0.0 41.99785 41 GTGGTCG 120 0.0 40.83124 48 CCGTATC 70 1.8982973E-8 39.99795 55 GACGAAA 35 0.0012504499 39.99795 23 GTGTAGA 115 0.0 39.56319 36 TGTAGAT 125 0.0 39.197994 37 >>END_MODULE