##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779731_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 134812 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.42875263329674 31.0 21.0 34.0 12.0 34.0 2 24.733421357149215 24.0 12.0 34.0 12.0 34.0 3 23.961398095125062 23.0 11.0 33.0 11.0 34.0 4 25.699025309319644 31.0 21.0 34.0 11.0 34.0 5 25.373075097172357 31.0 21.0 34.0 11.0 34.0 6 26.83603091712904 31.0 12.0 36.0 11.0 38.0 7 27.656284307034984 31.0 21.0 37.0 12.0 38.0 8 27.166609797347416 31.0 21.0 37.0 11.0 38.0 9 28.85864018039937 34.0 21.0 37.0 12.0 38.0 10-11 28.130199833842685 34.0 21.0 37.0 11.0 38.0 12-13 27.61453357267899 31.0 16.0 36.5 11.0 38.0 14-15 27.48423730825149 32.0 21.0 37.0 11.0 38.0 16-17 27.208379076046644 31.0 16.0 36.5 11.0 38.0 18-19 27.503015310209776 31.5 21.0 37.0 11.0 38.0 20-21 26.58130952734178 29.0 16.0 36.5 11.0 38.0 22-23 26.687449930273267 30.5 16.0 36.5 11.0 38.0 24-25 27.603870575319704 32.0 21.0 37.0 11.0 38.0 26-27 26.350068984956827 29.0 16.0 36.5 11.0 38.0 28-29 28.24095406937068 34.0 21.0 37.0 11.0 38.0 30-31 28.886382517876747 34.0 21.5 37.0 11.0 38.0 32-33 29.02822449040145 34.0 22.0 37.0 11.0 38.0 34-35 29.11978162181408 34.0 22.0 37.0 11.0 38.0 36-37 26.959580749488175 31.5 16.0 37.0 11.0 38.0 38-39 25.350558555618193 26.5 11.0 35.0 11.0 37.5 40-41 26.179231077352163 29.0 15.5 35.5 11.0 37.0 42-43 27.39950078628015 32.5 16.0 36.5 11.0 38.0 44-45 29.207051301071118 34.0 23.0 37.0 11.0 38.0 46-47 27.873468237248908 32.0 17.5 37.0 11.0 38.0 48-49 26.998631427469366 30.0 16.0 36.5 11.0 38.0 50-51 24.950219565023886 26.5 11.0 35.0 11.0 37.5 52-53 28.00183959884877 32.5 21.5 36.5 11.0 38.0 54-55 27.188707236744506 30.5 16.0 36.5 11.0 38.0 56-57 27.754179894964842 32.5 17.0 37.0 11.0 38.0 58-59 28.861889149333887 34.0 22.5 37.0 11.0 38.0 60-61 29.54237382428864 34.0 23.0 37.0 11.0 38.0 62-63 29.34487656885144 34.0 22.5 37.0 11.0 38.0 64-65 29.031573598789425 34.0 22.5 37.0 11.0 38.0 66-67 26.86721137584191 31.0 14.5 37.0 11.0 38.0 68-69 26.78357267899 31.0 16.0 37.0 11.0 38.0 70-71 26.3342172803608 29.0 15.0 36.5 11.0 38.0 72-73 25.19460433789277 26.5 11.0 35.0 11.0 37.5 74-75 27.06043230572946 30.0 16.0 36.5 11.0 37.5 76 27.02334361926238 31.0 21.0 36.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 30.0 13 155.0 14 393.0 15 711.0 16 1360.0 17 2799.0 18 4775.0 19 6597.0 20 7322.0 21 7241.0 22 6777.0 23 6551.0 24 6362.0 25 6296.0 26 6293.0 27 6387.0 28 6580.0 29 6667.0 30 7023.0 31 7406.0 32 7998.0 33 8185.0 34 8032.0 35 6939.0 36 4714.0 37 1215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.96166513366763 17.062279322315522 10.469394415927367 33.50666112808949 2 19.004242945731832 17.1260718630389 42.10456042488799 21.765124766341277 3 17.84855947541762 15.129216983651306 42.030383051953834 24.991840488977243 4 14.433433225528885 19.508649081684123 32.79084947927484 33.267068213512154 5 13.019612497403793 27.188232501557724 42.65718185324749 17.134973147790998 6 25.239592914577337 35.62145803044239 17.823339168620002 21.315609886360264 7 27.26537696940925 24.72999436251966 20.272676022905973 27.73195264516512 8 22.43939708631279 34.157196688722074 18.081476426430882 25.321929798534253 9 23.121828917307063 16.17585971575231 19.410734949411033 41.2915764175296 10-11 24.22641985290572 23.142684414905258 27.76803165902019 24.862864073168833 12-13 23.04208824140284 18.501320357238228 31.874758923537964 26.581832477820967 14-15 24.811589472747233 22.52284663086372 22.98015013500282 29.685413761386226 16-17 27.884490566457607 21.37614372661086 24.610289181560923 26.12907652537061 18-19 21.841608468120302 21.58532469410992 28.534286763369593 28.038780074400183 20-21 27.206035071061923 20.959187609411625 25.7684775835979 26.06629973592855 22-23 28.06575082336884 20.38097498738985 25.572649319051717 25.980624870189594 24-25 22.71756223481589 25.127955968311426 23.69336557576477 28.46111622110791 26-27 25.58748479363855 23.725261846126457 25.53259353766727 25.154659822567726 28-29 23.548719698543156 24.08836008663917 25.817805536599113 26.545114678218557 30-31 22.961320065424687 24.048764385827617 26.14947537858417 26.840440170163525 32-33 23.511260125211404 23.9952674836068 25.863424620953623 26.63004777022817 34-35 23.624380618936 24.053125834495447 26.046642732101 26.275850814467557 36-37 26.803993709758778 20.8883482182595 29.547072960864018 22.760585111117702 38-39 25.849701806960805 19.3031777586565 34.56739756104798 20.27972287333472 40-41 23.699299765599502 25.186926979794084 24.027163753968487 27.086609500637927 42-43 21.463593745363916 25.46768833634988 25.492537756282825 27.576180162003382 44-45 21.959469483428776 22.98979319348426 27.620686585763877 27.430050737323086 46-47 26.34409399756698 20.944352134824793 27.183410972317006 25.52814289529122 48-49 25.92620065795574 21.39135014446097 28.19232780586226 24.490121391721033 50-51 30.716850132035724 18.83437676171261 28.456665578731865 21.992107527519806 52-53 21.60490164080349 22.803607987419518 28.157730765807198 27.433759605969794 54-55 25.155124006483128 21.503358393015432 27.08300107928478 26.258516521216663 56-57 24.477140303312403 21.79747276753096 26.815219769826758 26.91016715932988 58-59 21.35797020283878 23.681955916223764 27.38193700092351 27.578136880013947 60-61 21.128682906566183 22.81918523573569 27.530190190784204 28.521941666913925 62-63 20.868475124433466 23.569664196541826 27.451024026229316 28.110836652795395 64-65 20.936192623802036 24.709595584962763 26.50431712310477 27.849894668130432 66-67 18.974712745992537 27.93466408527494 22.629829910022178 30.460793258710346 68-69 19.368647525780844 27.244973662734623 23.45018176422583 29.936197047258702 70-71 19.351464823104852 27.898955207827225 22.33006828052503 30.419511688542894 72-73 18.26432365071359 28.882443699373944 20.880930480966086 31.97230216894639 74-75 20.968459781028397 24.564207934011808 24.474453312761476 29.992878972198323 76 22.187194018336648 22.631516482212266 25.005192416105395 30.1760970833457 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 0.5 12 0.0 13 0.5 14 1.0 15 2.5 16 4.5 17 5.0 18 9.0 19 17.5 20 31.5 21 41.0 22 48.5 23 75.0 24 112.5 25 131.0 26 171.0 27 264.0 28 401.0 29 485.0 30 625.0 31 887.0 32 1243.5 33 1478.0 34 1732.0 35 2282.0 36 2985.5 37 3393.0 38 3835.0 39 4681.5 40 5579.0 41 6435.5 42 6799.0 43 7046.0 44 7578.0 45 7831.5 46 7800.0 47 7746.0 48 7586.0 49 7149.5 50 6819.0 51 6390.0 52 5711.5 53 5060.0 54 4658.0 55 4331.0 56 3679.0 57 3101.5 58 2849.0 59 2637.0 60 2376.0 61 2274.5 62 2222.0 63 2182.5 64 2119.0 65 2078.0 66 2116.0 67 2171.0 68 2103.5 69 1956.0 70 1818.0 71 1760.0 72 1684.5 73 1510.5 74 1281.0 75 1150.0 76 1046.5 77 838.0 78 663.5 79 594.0 80 493.5 81 341.5 82 234.0 83 178.0 84 154.5 85 110.0 86 69.5 87 50.0 88 37.5 89 21.5 90 14.5 91 7.0 92 3.0 93 2.5 94 1.0 95 0.5 96 1.0 97 1.5 98 1.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 3.7088686467080085E-4 12-13 0.0 14-15 0.0 16-17 3.7088686467080085E-4 18-19 3.7088686467080085E-4 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 3.7088686467080085E-4 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 3.7088686467080085E-4 50-51 0.0 52-53 0.0 54-55 3.7088686467080085E-4 56-57 3.7088686467080085E-4 58-59 3.7088686467080085E-4 60-61 0.0 62-63 7.417737293416017E-4 64-65 0.0 66-67 7.417737293416017E-4 68-69 0.016319022045515236 70-71 3.7088686467080085E-4 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 134812.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.77011562433972 #Duplication Level Percentage of deduplicated Percentage of total 1 99.00924634090981 97.79154708970395 2 0.8044305908031525 1.5890740493076656 3 0.13920279246324962 0.41247227720478385 4 0.032115995234794505 0.12688402250925584 5 0.011005631434300545 0.054351374464236636 6 0.0029991745481197274 0.01777372901372174 7 0.0 0.0 8 9.994746065731762E-4 0.007897457796385926 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.002225321188024805 0.0 10 0.0 0.0 0.0 0.002225321188024805 0.0 11 0.0 0.0 0.0 0.0029670949173664063 0.0 12 0.0 0.0 0.0 0.0029670949173664063 0.0 13 0.0 0.0 0.0 0.0029670949173664063 0.0 14 0.0 0.0 0.0 0.0029670949173664063 0.0 15 0.0 0.0 0.0 0.003708868646708008 0.0 16 0.0 0.0 0.0 0.003708868646708008 0.0 17 0.0 0.0 0.0 0.003708868646708008 0.0 18 0.0 0.0 0.0 0.003708868646708008 0.0 19 0.0 0.0 0.0 0.00445064237604961 0.0 20 0.0 0.0 0.0 0.00445064237604961 0.0 21 0.0 0.0 0.0 0.00445064237604961 0.0 22 0.0 0.0 0.0 0.005192416105391211 0.0 23 0.0 0.0 0.0 0.005934189834732813 0.0 24 0.0 0.0 0.0 0.00890128475209922 0.0 25 0.0 0.0 0.0 0.00964305848144082 0.0 26 0.0 0.0 0.0 0.00964305848144082 0.0 27 0.0 0.0 0.0 0.014093700857490432 0.0 28 0.0 0.0 0.0 0.014835474586832032 0.0 29 0.0 0.0 0.0 0.01780256950419844 0.0 30 0.0 0.0 0.0 0.02225321188024805 0.0 31 0.0 0.0 0.0 0.02670385425629766 0.0 32 0.0 0.0 0.0 0.03263804409103047 0.0 33 0.0 0.0 0.0 0.04079755511378809 0.0 34 0.0 0.0 0.0 0.051924161053912114 0.0 35 0.0 0.0 0.0 0.06601786191140255 0.0 36 0.0 0.0 0.0 0.07788624158086817 0.0 37 0.0 0.0 0.0 0.10829896448387384 0.0 38 0.0 0.0 0.0 0.15948135180844436 0.0 39 0.0 0.0 0.0 0.22179034507313888 0.0 40 0.0 0.0 0.0 0.3234133459929383 0.0 41 0.0 0.0 0.0 0.43022876301812896 0.0 42 0.0 0.0 0.0 0.5644898080289589 0.0 43 0.0 0.0 0.0 0.7551256564697505 0.0 44 0.0 0.0 0.0 0.904963949796754 0.0 45 0.0 0.0 0.0 1.025873067679435 0.0 46 0.0 0.0 0.0 1.1779366821944635 0.0 47 0.0 0.0 0.0 1.368572530635255 0.0 48 0.0 0.0 0.0 1.521377918879625 0.0 49 0.0 0.0 0.0 1.6882770079814853 0.0 50 0.0 0.0 0.0 1.929353470017506 0.0 51 0.0 0.0 0.0 2.2260629617541463 0.0 52 0.0 0.0 0.0 2.5524434026644514 0.0 53 0.0 0.0 0.0 2.9159125300418363 0.0 54 0.0 0.0 0.0 3.25119425570424 7.417737293416016E-4 55 0.0 0.0 0.0 3.5063644185977507 7.417737293416016E-4 56 0.0 0.0 0.0 3.7808206984541437 7.417737293416016E-4 57 0.0 0.0 0.0 4.034507313888971 7.417737293416016E-4 58 0.0 0.0 0.0 4.262973622526185 7.417737293416016E-4 59 0.0 0.0 0.0 4.540396997299943 7.417737293416016E-4 60 0.0 0.0 0.0 4.7302910720113935 7.417737293416016E-4 61 0.0 0.0 0.0 4.887547102631813 7.417737293416016E-4 62 0.0 0.0 0.0 5.018841052725277 7.417737293416016E-4 63 0.0 0.0 0.0 5.182031273180429 7.417737293416016E-4 64 0.0 0.0 0.0 5.357089873305047 7.417737293416016E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCTACG 20 0.0069398177 52.49805 16 GCGTAAC 20 0.0069398177 52.49805 36 GACTAAA 20 0.0069398177 52.49805 23 GCCGACT 70 7.2759576E-12 49.998146 20 CGTATCA 35 0.0012520583 39.99852 56 AGACACG 35 0.0012520583 39.99852 69 CCGTGTA 45 9.160744E-5 38.887444 34 GCGTGTA 45 9.160744E-5 38.887444 34 GTGTCGA 55 6.6570265E-6 38.1804 36 CTCGGTG 65 4.8290894E-7 37.69091 44 TGCCTAC 95 1.8553692E-10 36.84074 19 CAGTTCT 40 0.0024123301 34.998703 70 TAGATCT 70 8.626921E-7 34.998703 39 CGTCGAT 50 1.7028725E-4 34.998703 37 ACGAGGC 40 0.0024123301 34.998703 24 TCGGTGG 105 5.4205884E-10 33.332096 45 GCTGCCT 95 7.54153E-9 33.156666 17 CTGCCTA 95 7.54153E-9 33.156666 18 TCTTCCG 85 1.0535223E-7 32.939953 11 ATATCTC 75 1.4793641E-6 32.665455 40 >>END_MODULE