SRR1779722_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779722_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	185555
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTATA	20	7.912189E-5	69.998116	48
ATCTCGT	40	1.0608346E-8	61.248352	42
GACGCTT	50	9.749783E-10	55.99849	14
TCGCATA	20	0.0069436375	52.498585	40
CTTAGAT	20	0.0069436375	52.498585	3
CGACGAT	55	2.2700988E-9	50.90772	22
CGTGTAT	35	2.0809812E-5	49.998653	35
TAGATCT	140	0.0	49.998653	39
TCGTTGG	50	6.165101E-8	48.99868	45
TCGGTGG	100	0.0	48.99868	45
ATCTCGG	110	0.0	47.725986	42
GTAGATC	155	0.0	47.41808	38
AGATCTC	135	0.0	46.66541	40
GATCTCG	160	0.0	45.936264	41
TGGTCGC	155	0.0	45.160076	49
TCGTCAT	40	4.580579E-5	43.74882	8
TTCGGTG	40	4.580579E-5	43.74882	44
ACGCTTC	105	0.0	43.332165	15
GCAGTGT	65	9.949872E-9	43.07576	33
GCCGACT	65	9.949872E-9	43.07576	20