##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779721_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 82778 Sequences flagged as poor quality 0 Sequence length 76 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.29910121046655 32.0 21.0 34.0 12.0 34.0 2 25.784532122061417 31.0 21.0 34.0 12.0 34.0 3 25.14971369204378 27.0 21.0 34.0 11.0 34.0 4 26.157264007344946 32.0 21.0 34.0 12.0 34.0 5 26.156877431201526 32.0 21.0 34.0 11.0 34.0 6 27.655174080069585 33.0 21.0 37.0 11.0 38.0 7 28.703326970934306 34.0 21.0 38.0 12.0 38.0 8 27.909239169827732 34.0 21.0 38.0 11.0 38.0 9 29.477179927033752 34.0 22.0 38.0 12.0 38.0 10-11 28.702390731836964 34.0 21.0 38.0 11.0 38.0 12-13 28.507187900166713 33.0 21.0 37.5 11.0 38.0 14-15 27.887778153615695 33.5 21.0 37.5 11.0 38.0 16-17 27.802248181884075 32.5 16.0 37.5 11.0 38.0 18-19 28.28643480151731 34.0 21.0 37.5 11.0 38.0 20-21 27.23671748532219 31.0 16.0 37.0 11.0 38.0 22-23 27.324929329048782 30.5 16.0 37.5 11.0 38.0 24-25 27.952275967044386 32.5 21.0 37.5 11.0 38.0 26-27 26.884268767063713 30.0 16.0 37.0 11.0 38.0 28-29 28.30401797579067 34.0 21.0 38.0 11.0 38.0 30-31 28.721061151513688 34.0 21.0 38.0 11.0 38.0 32-33 28.868986928894152 34.0 21.0 38.0 11.0 38.0 34-35 28.936607552731402 34.0 21.0 38.0 11.0 38.0 36-37 27.50791273043562 32.5 16.0 37.0 11.0 38.0 38-39 26.529047573026652 27.0 16.0 37.0 11.0 38.0 40-41 26.864867476865832 31.0 11.0 37.0 11.0 38.0 42-43 27.665418347870208 32.5 16.0 37.5 11.0 38.0 44-45 28.929812268960355 34.5 21.0 38.0 11.0 38.0 46-47 27.98627050665636 33.0 16.0 37.5 11.0 38.0 48-49 27.261289231438305 32.5 16.0 37.0 11.0 38.0 50-51 25.794202565899152 27.0 11.0 36.5 11.0 38.0 52-53 27.938347145376788 33.5 21.0 37.5 11.0 38.0 54-55 27.34608229239653 31.5 16.0 37.5 11.0 38.0 56-57 27.737484597356787 32.5 16.0 38.0 11.0 38.0 58-59 28.440890091570225 34.0 21.0 38.0 11.0 38.0 60-61 28.99541544854913 35.0 21.0 38.0 11.0 38.0 62-63 28.92708811519969 34.5 21.0 38.0 11.0 38.0 64-65 28.689990093986324 35.0 21.0 38.0 11.0 38.0 66-67 27.28235763125468 31.5 17.5 37.5 11.0 38.0 68-69 27.223072555509916 31.5 18.5 37.0 11.0 38.0 70-71 27.012243591292375 30.0 15.0 37.0 11.0 38.0 72-73 26.21589673584769 27.0 11.0 37.0 11.0 38.0 74-75 27.252639590229286 32.5 16.0 37.0 11.0 38.0 76 27.32154678779386 32.0 19.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 0.0 5 1.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 9.0 12 54.0 13 321.0 14 836.0 15 1491.0 16 2493.0 17 3957.0 18 5102.0 19 5246.0 20 4746.0 21 3630.0 22 2597.0 23 2056.0 24 1672.0 25 1596.0 26 1611.0 27 1634.0 28 1759.0 29 2075.0 30 2513.0 31 2933.0 32 3566.0 33 4676.0 34 5974.0 35 7579.0 36 8168.0 37 4481.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.59252458382662 17.221967189349826 12.921307593805118 35.26420063301843 2 17.372973495373166 14.360095677595497 43.72055377032545 24.546377056705886 3 17.76822064099931 14.180267465600348 42.68456213682545 25.36694975657489 4 14.610162120370147 22.141148614366134 27.945831017903306 35.302858247360405 5 14.290201384442538 24.27969121857521 41.68549234690796 19.744615050074295 6 25.150402280799245 32.17763173790137 15.761434197492088 26.91053178380729 7 23.505037570368938 22.560342119886926 19.319142767401967 34.61547754234216 8 20.351555421322864 32.291150709755364 16.584717607973424 30.77257626094835 9 20.19691935971006 14.715795832074901 18.214436726064633 46.87284808215041 10-11 23.260927344335176 21.80878053495059 26.73544832918549 28.19484379152874 12-13 21.49165196800928 16.46954357648537 30.797714258100367 31.24109019740498 14-15 24.816371895235335 20.65514158693341 22.083695757224316 32.44479076060694 16-17 27.81704178898916 18.446836528819784 23.078781728341365 30.657339953849682 18-19 21.5623263343562 17.948268780051706 27.993089617512744 32.49631526807935 20-21 27.50545155814895 17.955408972570055 24.112498414366744 30.426641054914256 22-23 29.038103752386014 16.787880252253125 23.639065407011863 30.534950588349 24-25 22.203563877982482 22.639081848384173 20.884929024463908 34.27242524916944 26-27 26.310925334187047 21.765498245253728 23.570380124553765 28.35319629600546 28-29 23.60797342192691 21.38205980066445 23.740863787375417 31.269102990033222 30-31 22.897148276341145 21.36950389310718 24.72560994025938 31.007737890292304 32-33 23.649652672908488 20.55209906372697 24.904862579281183 30.89338568408336 34-35 23.046813651464817 20.770764119601328 24.850498338870434 31.331923890063422 36-37 27.375911372601138 17.145584033537304 29.53421082834482 25.94429376551674 38-39 26.71430642472274 15.383453741513037 34.38700558146277 23.515234252301447 40-41 24.09558499296281 22.220007369419324 23.983835601543955 29.700572036073915 42-43 19.537903956508607 22.961643008154635 26.89096949562066 30.6094835397161 44-45 19.589970341107467 18.63798633637171 30.079311865369167 31.69273145715166 46-47 25.961945031712474 17.740259740259738 27.471458773784356 28.826336454243428 48-49 25.283905574214128 18.45144610626525 29.30630391185638 26.958344407664242 50-51 32.03160393599478 16.540722082283796 27.25960289702747 24.168071084693956 52-53 18.83841739655693 20.539414074297795 29.431591664149803 31.190576864995467 54-55 24.466619953125377 18.786092251189988 26.28361562809578 30.463672167588857 56-57 24.41241671750699 19.35898907285368 25.512983914322472 30.715610295316853 58-59 19.529079179452484 21.463865465001085 27.983424746901203 31.023630608645224 60-61 19.42083612706812 19.734338473805337 27.63532247250059 33.20950292662596 62-63 19.286853359750648 21.503733056273706 27.297218933481528 31.91219465049412 64-65 19.40440954394443 22.683177287828453 26.34732709151314 31.565086076713982 66-67 17.786489637383944 28.553220535557877 20.51199961340284 33.148290213655336 68-69 18.244325082019706 27.626896422551038 20.60613018023189 33.522648315197365 70-71 17.681987592647406 28.442073852138666 19.57631367527047 34.29962487994346 72-73 16.795530051344006 30.76472364844458 18.206584113560858 34.23316218665056 74-75 19.106241090197404 25.0616135501486 21.709715611182258 34.122429748471745 76 19.293497958296083 23.305627370913573 22.246115930122986 35.15475874066736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 1.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.5 14 0.5 15 0.0 16 0.5 17 1.0 18 4.0 19 7.5 20 10.5 21 13.0 22 20.5 23 35.0 24 61.5 25 81.0 26 108.0 27 156.5 28 226.0 29 274.0 30 346.0 31 482.0 32 644.0 33 742.0 34 892.5 35 1169.5 36 1442.5 37 1589.0 38 1782.5 39 2155.5 40 2495.5 41 2869.0 42 3082.0 43 3207.0 44 3479.5 45 3661.0 46 3695.0 47 3709.5 48 3764.5 49 3664.5 50 3524.0 51 3431.0 52 3196.0 53 3002.5 54 2951.0 55 2853.5 56 2673.0 57 2508.5 58 2427.0 59 2428.0 60 2379.5 61 2369.0 62 2408.0 63 2380.0 64 2293.5 65 2167.5 66 2049.0 67 1998.0 68 1943.5 69 1786.5 70 1645.5 71 1607.0 72 1506.0 73 1307.5 74 1119.5 75 1029.0 76 942.0 77 748.0 78 565.5 79 490.0 80 407.0 81 273.5 82 174.5 83 126.0 84 100.0 85 62.5 86 37.5 87 24.0 88 16.5 89 7.0 90 3.5 91 1.0 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0012080504481867163 4 0.0 5 0.0012080504481867163 6 0.0 7 0.0 8 0.0036241513445601486 9 0.0036241513445601486 10-11 0.004832201792746865 12-13 0.004832201792746865 14-15 0.0024161008963734325 16-17 0.006040252240933581 18-19 0.004832201792746865 20-21 0.004228176568653506 22-23 0.004832201792746865 24-25 0.0036241513445601486 26-27 0.0030201261204667903 28-29 0.0036241513445601486 30-31 0.004228176568653506 32-33 0.0036241513445601486 34-35 0.0036241513445601486 36-37 0.005436227016840223 38-39 0.004832201792746865 40-41 0.004228176568653506 42-43 0.0036241513445601486 44-45 0.004228176568653506 46-47 0.0036241513445601486 48-49 0.004832201792746865 50-51 0.004228176568653506 52-53 0.0036241513445601486 54-55 0.004832201792746865 56-57 0.0030201261204667903 58-59 0.004832201792746865 60-61 0.004228176568653506 62-63 0.004832201792746865 64-65 0.0036241513445601486 66-67 0.005436227016840223 68-69 0.028389185532387833 70-71 0.005436227016840223 72-73 0.0036241513445601486 74-75 0.004832201792746865 76 0.004832201792746865 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 82778.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.12631375486241 #Duplication Level Percentage of deduplicated Percentage of total 1 98.3884668890886 96.54497571818598 2 1.3677718000172356 2.6842880958708832 3 0.19820995481797926 0.583488366474184 4 0.03816464968544942 0.14979825557515283 5 0.0061555886589434545 0.030201261204667908 6 0.001231117731788691 0.007248302689120297 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012080504481867163 0.0 2 0.0 0.0 0.0 0.013288554930053879 0.0 3 0.0 0.0 0.0 0.01691270627461403 0.0 4 0.0 0.0 0.0 0.02295295851554761 0.0 5 0.0 0.0 0.0 0.026577109860107757 0.0 6 0.0 0.0 0.0 0.026577109860107757 0.0 7 0.0 0.0 0.0 0.028993210756481192 0.0 8 0.0 0.0 0.0 0.028993210756481192 0.0012080504481867163 9 0.0 0.0 0.0 0.028993210756481192 0.0012080504481867163 10 0.0 0.0 0.0 0.030201261204667908 0.0012080504481867163 11 0.0 0.0 0.0 0.030201261204667908 0.0012080504481867163 12 0.0 0.0 0.0 0.030201261204667908 0.0012080504481867163 13 0.0 0.0 0.0 0.03140931165285462 0.0012080504481867163 14 0.0 0.0 0.0 0.03261736210104134 0.0012080504481867163 15 0.0 0.0 0.0 0.03261736210104134 0.0012080504481867163 16 0.0 0.0 0.0 0.03261736210104134 0.0012080504481867163 17 0.0 0.0 0.0 0.03261736210104134 0.0012080504481867163 18 0.0 0.0 0.0 0.03261736210104134 0.0012080504481867163 19 0.0 0.0 0.0 0.03382541254922806 0.0012080504481867163 20 0.0 0.0 0.0 0.03503346299741477 0.0012080504481867163 21 0.0 0.0 0.0 0.04107371523834835 0.0012080504481867163 22 0.0 0.0 0.0 0.04348981613472178 0.0012080504481867163 23 0.0 0.0 0.0 0.04348981613472178 0.0012080504481867163 24 0.0 0.0 0.0 0.055570320616588946 0.0012080504481867163 25 0.0 0.0 0.0 0.06281862330570924 0.0012080504481867163 26 0.0 0.0 0.0 0.06765082509845612 0.0012080504481867163 27 0.0 0.0 0.0 0.1195969943704849 0.0012080504481867163 28 0.0 0.0 0.0 0.18120756722800743 0.0012080504481867163 29 0.0 0.0 0.0 0.21986518156998236 0.0012080504481867163 30 0.0 0.0 0.0 0.26335499770470416 0.0012080504481867163 31 0.0 0.0 0.0 0.2887240571166252 0.0012080504481867163 32 0.0 0.0 0.0 0.35275073087052117 0.0012080504481867163 33 0.0 0.0 0.0 0.4034888496943632 0.0012080504481867163 34 0.0 0.0 0.0 0.4953006837565537 0.0012080504481867163 35 0.0 0.0 0.0 0.6511391915726401 0.0012080504481867163 36 0.0 0.0 0.0 0.7743603372876852 0.0012080504481867163 37 0.0 0.0 0.0 1.1379835221918868 0.0012080504481867163 38 0.0 0.0 0.0 1.4677812945468602 0.0012080504481867163 39 0.0 0.0 0.0 1.8809345478267172 0.0012080504481867163 40 0.0 0.0 0.0 2.3170407596221216 0.0012080504481867163 41 0.0 0.0 0.0 2.690328348111817 0.0012080504481867163 42 0.0 0.0 0.0 3.1409311652854623 0.0012080504481867163 43 0.0 0.0 0.0 3.57220517528812 0.0012080504481867163 44 0.0 0.0 0.0 4.028848244702699 0.0012080504481867163 45 0.0 0.0 0.0 4.3888472782623404 0.0012080504481867163 46 0.0 0.0 0.0 4.754886564062915 0.0012080504481867163 47 0.0 0.0 0.0 5.19461692720288 0.0012080504481867163 48 0.0 0.0 0.0 5.473676580734011 0.0012080504481867163 49 0.0 0.0 0.0 5.758776486506076 0.0012080504481867163 50 0.0 0.0 0.0 6.164681437096813 0.0012080504481867163 51 0.0 0.0 0.0 6.659982120853367 0.0012080504481867163 52 0.0 0.0 0.0 7.0477663147213025 0.0012080504481867163 53 0.0 0.0 0.0 7.476624223827587 0.0012080504481867163 54 0.0 0.0 0.0 7.878905023073764 0.0012080504481867163 55 0.0 0.0 0.0 8.214743047669671 0.0012080504481867163 56 0.0 0.0 0.0 8.530044214646404 0.0012080504481867163 57 0.0 0.0 0.0 8.806687767281161 0.0012080504481867163 58 0.0 0.0 0.0 9.080915219019547 0.0012080504481867163 59 0.0 0.0 0.0 9.384135881514412 0.0012080504481867163 60 0.0 0.0 0.0 9.552054893812366 0.0012080504481867163 61 0.0 0.0 0.0 9.752591268211361 0.0012080504481867163 62 0.0 0.0 0.0 9.860107758099979 0.0012080504481867163 63 0.0 0.0 0.0 10.023194568605184 0.0012080504481867163 64 0.0 0.0 0.0 10.180241126869458 0.0012080504481867163 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTCGA 25 2.8177456E-6 70.00001 36 CTTCCGG 20 7.8852856E-5 70.0 42 GCAAACA 15 0.0022175955 70.0 65 TTCAAAA 20 7.8852856E-5 70.0 63 AGTGGCT 15 0.0022175955 70.0 47 TGAAAGT 15 0.0022175955 70.0 13 GTGTCTA 15 0.0022175955 70.0 36 TTTAGAT 40 1.0510121E-8 61.25 37 TCGTTTA 25 2.3780481E-4 56.000004 34 TGTACAT 25 2.3780481E-4 56.000004 37 GCCGTAT 75 0.0 56.0 54 CTACTAG 20 0.006929374 52.5 22 GTTTCCA 20 0.006929374 52.5 36 GCTGGTA 20 0.006929374 52.5 47 CATTGTA 20 0.006929374 52.5 34 TTAGATC 40 7.3995034E-7 52.5 38 TTCCGGT 20 0.006929374 52.5 43 ACTTACA 20 0.006929374 52.5 69 AGTCTTG 20 0.006929374 52.5 48 GAAGTGT 20 0.006929374 52.5 33 >>END_MODULE