SRR1779719_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779719_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	225758
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAATCG	20	0.006940581	52.50814	66
GCGTATA	20	0.006940581	52.50814	36
TCGTTTA	50	6.164191E-8	49.0076	34
AGTGTCG	30	5.864828E-4	46.673904	35
ATCTCGG	185	0.0	45.40239	42
CTTCCGA	80	2.910383E-11	43.74709	18
CGTGTAT	65	9.949872E-9	43.0836	35
TCTCGGT	200	0.0	41.997208	43
CTCGTTT	60	2.5842928E-7	40.839664	33
GTCGATT	35	0.0012526709	40.006203	38
CGCCGTA	105	0.0	39.997345	53
TACGGGG	35	0.0012540366	39.99734	30
ACCGTAG	35	0.0012540366	39.99734	14
CTCGGTG	185	0.0	39.727093	44
TCGGTGG	205	0.0	39.265682	45
GTGTCGA	90	1.03682396E-10	38.894924	36
TCCGACT	55	6.678374E-6	38.17928	20
TGTCGAT	75	3.5157427E-8	37.33912	37
CTCGGTT	75	3.522655E-8	37.330853	44
ACGCTTC	85	2.561137E-9	37.056362	15