SRR1779718_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779718_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	171951
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACCC	20	0.0069428342	52.498478	46
GCGCCAA	20	0.0069428342	52.498478	55
AAGGATC	20	0.0069428342	52.498478	15
TACCGAC	20	0.0069428342	52.498478	19
TAGATCT	150	0.0	51.33184	39
ACGTATG	35	2.0803645E-5	49.998547	70
GTAGATC	140	0.0	47.49862	38
CACGTGT	30	5.8662286E-4	46.66531	33
ACGCTTC	70	3.8016879E-10	44.99869	15
GACGCTT	40	4.579228E-5	43.74873	14
ATCTCGG	105	0.0	43.332073	42
GCCGACT	95	3.6379788E-12	40.525135	20
TCTCGTT	35	0.0012529726	39.998837	43
CGGTGTT	35	0.0012529726	39.998837	46
TGTCGAC	35	0.0012529726	39.998837	19
TAGATCC	45	9.1708614E-5	38.88776	39
GATCTCG	135	0.0	38.88776	41
GTGGTCG	145	0.0	38.619568	48
GTAGCTC	55	6.667382E-6	38.180706	38
GTGTATA	65	4.8391485E-7	37.69121	36