##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779716_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 80658 Sequences flagged as poor quality 0 Sequence length 76 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.7557588831858 32.0 23.0 34.0 12.0 34.0 2 26.767264251531156 32.0 21.0 34.0 12.0 34.0 3 25.82827493862977 31.0 21.0 34.0 11.0 34.0 4 27.63723375238662 32.0 23.0 34.0 12.0 34.0 5 27.244600659574996 32.0 23.0 34.0 11.0 34.0 6 29.31812095514394 34.0 22.0 38.0 11.0 38.0 7 30.315579359765927 36.0 26.0 38.0 12.0 38.0 8 29.53919016092638 35.0 22.0 38.0 11.0 38.0 9 31.094919288849216 37.0 26.0 38.0 12.0 38.0 10-11 30.533797019514495 36.0 26.0 38.0 11.0 38.0 12-13 29.889564581318652 35.5 23.5 38.0 11.0 38.0 14-15 29.58506285799301 34.5 23.0 38.0 11.0 38.0 16-17 29.41981576533016 35.0 23.5 38.0 11.0 38.0 18-19 29.944909370428228 34.5 24.0 38.0 11.0 38.0 20-21 28.84847132336532 33.5 22.5 37.5 11.0 38.0 22-23 28.92099977683553 33.5 23.5 37.5 11.0 38.0 24-25 29.849549951647695 35.0 24.0 38.0 11.0 38.0 26-27 28.521882516303403 33.5 21.5 38.0 11.0 38.0 28-29 30.323520295568947 36.5 24.5 38.0 11.0 38.0 30-31 30.794477919115277 37.0 26.0 38.0 11.0 38.0 32-33 30.930775620521214 37.0 26.0 38.0 11.0 38.0 34-35 30.99145775992462 37.0 26.0 38.0 11.0 38.0 36-37 29.199192888492153 34.5 23.0 38.0 11.0 38.0 38-39 27.80112326117682 32.0 21.0 37.0 11.0 38.0 40-41 28.59967393191004 34.0 21.5 37.0 11.0 38.0 42-43 29.536822137915642 35.0 23.5 37.5 11.0 38.0 44-45 31.026172233380446 37.0 26.0 38.0 11.0 38.0 46-47 29.777219866597235 35.5 24.0 38.0 11.0 38.0 48-49 29.05262962136428 35.0 22.5 38.0 11.0 38.0 50-51 27.196248357261524 31.0 20.0 37.0 11.0 38.0 52-53 30.06494086141486 35.0 24.0 37.5 11.0 38.0 54-55 29.271628356765603 35.0 23.0 38.0 11.0 38.0 56-57 29.65685362890228 35.5 23.5 38.0 11.0 38.0 58-59 30.641194921768452 36.5 25.0 38.0 11.0 38.0 60-61 31.15882491507352 37.0 26.0 38.0 11.0 38.0 62-63 31.067240695281313 37.0 26.0 38.0 11.0 38.0 64-65 30.765429343648492 37.0 25.5 38.0 11.0 38.0 66-67 29.00496540950681 34.0 21.5 38.0 11.0 38.0 68-69 28.973852562672022 34.0 21.5 38.0 11.0 38.0 70-71 28.57392323142156 34.0 21.5 38.0 11.0 38.0 72-73 27.53191251952689 32.0 21.0 37.0 11.0 38.0 74-75 29.1859146023953 35.0 22.5 37.5 11.0 38.0 76 29.444741997074065 35.0 23.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 2.0 5 1.0 6 0.0 7 0.0 8 1.0 9 0.0 10 2.0 11 8.0 12 36.0 13 224.0 14 582.0 15 1080.0 16 1624.0 17 2548.0 18 3263.0 19 3707.0 20 3115.0 21 2547.0 22 1977.0 23 1684.0 24 1501.0 25 1503.0 26 1585.0 27 1771.0 28 2028.0 29 2427.0 30 2775.0 31 3356.0 32 4348.0 33 5615.0 34 7326.0 35 9070.0 36 9902.0 37 5049.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.55134022663592 17.083240348136577 12.140147288551663 35.22527213667584 2 18.438344615537204 14.580078851446851 42.626893798507275 24.354682734508668 3 19.549207766123633 15.385950556671377 38.63224974584046 26.432591931364524 4 15.410746609139824 18.94542388851695 27.896798829626324 37.7470306727169 5 15.930223908353792 25.53373502938332 38.17228297255077 20.363758089712118 6 28.879962310000245 31.456272161471894 14.741253192491754 24.922512336036103 7 26.332167918867317 22.397034392124773 18.90327059932059 32.36752708968732 8 22.397182993813 31.871102128873076 17.53561553816969 28.196099339144236 9 21.803280721113907 14.07883153757455 17.973292995920797 46.14459474539075 10-11 25.59561079941725 21.49344409658721 25.842348346300486 27.06859675769505 12-13 24.016465599543725 16.52511375894263 28.832777454031465 30.625643187482176 14-15 25.44433354617535 20.301409096826585 21.749561400789787 32.50469595620827 16-17 27.502727768685215 19.1706343302088 23.7433665625155 29.58327133859049 18-19 23.642641935203898 18.49900189701561 26.419352038981813 31.439004128798683 20-21 27.359631014153134 18.3959778558897 24.54078248309125 29.703608646865913 22-23 28.176261267404808 17.772432519559096 24.21360643745428 29.83769977558181 24-25 24.398983324034468 22.007935031926102 20.766226520364516 32.82685512367492 26-27 26.419480624143727 21.186666584009572 24.197037983001568 28.196814808845133 28-29 25.22147209978488 21.70581561866503 22.819840428499695 30.252871853050394 30-31 24.69793248814358 21.22376863705403 23.913703852949382 30.164595021853014 32-33 25.222555607905374 20.695811739033402 23.90024053363751 30.181392119423712 34-35 24.467010111154508 21.309676579441685 24.058472353958603 30.164840955445204 36-37 27.05450577791003 17.782572037891185 28.815776422159402 26.347145762039382 38-39 26.181619798641076 16.794995784357486 32.46540693349204 24.5579774835094 40-41 25.290912134306243 21.721852662380737 23.133481708337726 29.853753494975294 42-43 22.018746745356708 22.13033451533712 25.132045527810153 30.718873211496025 44-45 22.032038485859175 19.07306609797528 27.932624948854972 30.962270467310578 46-47 25.530200177301666 18.339563689114545 27.53693268116077 28.59330345242302 48-49 25.95857588325367 18.720824266770816 28.000644733334575 27.319955116640937 50-51 29.29197121017687 17.360064969282178 28.570365824173784 24.777597996367177 52-53 21.147026732133114 20.810395278480385 27.724049000644747 30.318528988741754 54-55 24.81773545603333 19.265486286762883 25.94232009125626 29.974458165947524 56-57 25.0320812849872 19.5636945241741 25.15358721460055 30.250636976238155 58-59 21.577002715336068 21.452394827222793 26.6766270318525 30.29397542558863 60-61 21.677836122080805 20.219090779464736 26.338629783699 31.764443314755457 62-63 21.553225916442965 21.684655586070935 25.764554905984387 30.99756359150171 64-65 21.76745916121633 22.492173212237688 25.234183689284272 30.50618393726171 66-67 20.369118987247603 25.650483871967662 20.85268097927503 33.12771616150971 68-69 20.76453263059991 25.90482095799101 20.935668888544413 32.39497752286467 70-71 20.466817519605716 26.72328818077555 20.458758252998976 32.35113604661976 72-73 19.979541861690585 27.400266575741604 19.72908465329655 32.89110690927126 74-75 21.797216453302752 24.923591953132266 23.36505378010601 29.914137813458975 76 22.637041078225938 23.146644182961154 24.101375060445623 30.114939678367286 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.5 3 0.5 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 0.0 11 0.5 12 1.0 13 0.5 14 1.0 15 2.5 16 3.5 17 4.0 18 3.5 19 9.0 20 14.0 21 13.0 22 22.5 23 51.0 24 90.0 25 110.0 26 142.5 27 182.0 28 263.0 29 337.0 30 394.0 31 515.5 32 677.5 33 775.0 34 896.0 35 1182.5 36 1457.0 37 1566.0 38 1777.5 39 2092.0 40 2316.5 41 2579.5 42 2721.0 43 2824.0 44 3024.0 45 3177.5 46 3234.0 47 3187.5 48 3158.0 49 3085.5 50 2996.0 51 2953.0 52 2836.5 53 2670.5 54 2578.0 55 2627.0 56 2616.0 57 2583.5 58 2611.0 59 2639.5 60 2623.5 61 2556.5 62 2534.0 63 2483.5 64 2456.5 65 2439.0 66 2336.0 67 2274.0 68 2178.5 69 2035.5 70 1862.5 71 1737.0 72 1640.0 73 1403.5 74 1161.5 75 1059.0 76 954.5 77 751.5 78 559.0 79 465.0 80 401.0 81 291.0 82 200.0 83 155.0 84 120.5 85 64.5 86 35.0 87 27.0 88 17.5 89 9.0 90 8.0 91 4.0 92 2.0 93 2.0 94 3.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.006199013117111756 9 0.006199013117111756 10-11 0.006818914428822931 12-13 0.006199013117111756 14-15 0.004339309181978229 16-17 0.007438815740534108 18-19 0.006199013117111756 20-21 0.00557911180540058 22-23 0.006199013117111756 24-25 0.003719407870267054 26-27 0.004339309181978229 28-29 0.00557911180540058 30-31 0.006818914428822931 32-33 0.004959210493689405 34-35 0.00557911180540058 36-37 0.007438815740534108 38-39 0.007438815740534108 40-41 0.008058717052245283 42-43 0.004959210493689405 44-45 0.006199013117111756 46-47 0.00557911180540058 48-49 0.00557911180540058 50-51 0.00557911180540058 52-53 0.007438815740534108 54-55 0.007438815740534108 56-57 0.004339309181978229 58-59 0.006199013117111756 60-61 0.008058717052245283 62-63 0.008058717052245283 64-65 0.006818914428822931 66-67 0.008058717052245283 68-69 0.025415953780158197 70-71 0.006818914428822931 72-73 0.006818914428822931 74-75 0.006818914428822931 76 0.008678618363956458 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 80658.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.23204145899973 #Duplication Level Percentage of deduplicated Percentage of total 1 98.41604402261711 96.67608916660467 2 1.3908521809369951 2.732524982022862 3 0.17417205169628433 0.5132782860968534 4 0.01640751211631664 0.06446973641796226 5 0.0012621163166397415 0.006199013117111756 6 0.0012621163166397415 0.007438815740534108 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0037194078702670534 0.0 2 0.0 0.0 0.0 0.0037194078702670534 0.0 3 0.0 0.0 0.0 0.0037194078702670534 0.0 4 0.0 0.0 0.0 0.0037194078702670534 0.0 5 0.0 0.0 0.0 0.0037194078702670534 0.0 6 0.0 0.0 0.0 0.0037194078702670534 0.0 7 0.0 0.0 0.0 0.0037194078702670534 0.0 8 0.0 0.0 0.0 0.0037194078702670534 0.0 9 0.0 0.0 0.0 0.00991842098737881 0.0 10 0.0 0.0 0.0 0.01115822361080116 0.0 11 0.0 0.0 0.0 0.013637828857645863 0.0 12 0.0 0.0 0.0 0.016117434104490565 0.0 13 0.0 0.0 0.0 0.016117434104490565 0.0 14 0.0 0.0 0.0 0.01983684197475762 0.0 15 0.0 0.0 0.0 0.01983684197475762 0.0 16 0.0 0.0 0.0 0.01983684197475762 0.0 17 0.0 0.0 0.0 0.01983684197475762 0.0 18 0.0 0.0 0.0 0.01983684197475762 0.0 19 0.0 0.0 0.0 0.02231644722160232 0.0 20 0.0 0.0 0.0 0.02231644722160232 0.0 21 0.0 0.0 0.0 0.026035855091869373 0.0 22 0.0 0.0 0.0 0.035954276079248185 0.0 23 0.0 0.0 0.0 0.05207171018373875 0.0 24 0.0 0.0 0.0 0.06322993379453991 0.0 25 0.0 0.0 0.0 0.06818914428822931 0.0 26 0.0 0.0 0.0 0.07438815740534108 0.0 27 0.0 0.0 0.0 0.11902105184854571 0.0 28 0.0 0.0 0.0 0.16241414366832801 0.0 29 0.0 0.0 0.0 0.2008480249944209 0.0 30 0.0 0.0 0.0 0.2467207220610479 0.0012398026234223512 31 0.0 0.0 0.0 0.27275657715291723 0.0012398026234223512 32 0.0 0.0 0.0 0.3173894715961219 0.0012398026234223512 33 0.0 0.0 0.0 0.38433881326092884 0.0012398026234223512 34 0.0 0.0 0.0 0.46616578640680406 0.0012398026234223512 35 0.0 0.0 0.0 0.6496565746733121 0.0012398026234223512 36 0.0 0.0 0.0 0.7711572317687024 0.0012398026234223512 37 0.0 0.0 0.0 1.0724292692603337 0.0012398026234223512 38 0.0 0.0 0.0 1.3823799251159214 0.0012398026234223512 39 0.0 0.0 0.0 1.7518411068957822 0.0012398026234223512 40 0.0 0.0 0.0 2.1460983411440897 0.0012398026234223512 41 0.0 0.0 0.0 2.5837486672121797 0.0012398026234223512 42 0.0 0.0 0.0 3.047434848372139 0.0012398026234223512 43 0.0 0.0 0.0 3.4677279377123162 0.0012398026234223512 44 0.0 0.0 0.0 3.905378263780406 0.0012398026234223512 45 0.0 0.0 0.0 4.257482208832354 0.0012398026234223512 46 0.0 0.0 0.0 4.583550298792432 0.0024796052468447024 47 0.0 0.0 0.0 5.034838453718168 0.0024796052468447024 48 0.0 0.0 0.0 5.276599965285526 0.0024796052468447024 49 0.0 0.0 0.0 5.572912792283469 0.0024796052468447024 50 0.0 0.0 0.0 6.031639762949738 0.0024796052468447024 51 0.0 0.0 0.0 6.445733839172804 0.0024796052468447024 52 0.0 0.0 0.0 6.815195020952665 0.0024796052468447024 53 0.0 0.0 0.0 7.278881202112624 0.0024796052468447024 54 0.0 0.0 0.0 7.742567383272583 0.0024796052468447024 55 0.0 0.0 0.0 8.050038433881326 0.0024796052468447024 56 0.0 0.0 0.0 8.37362691859456 0.0024796052468447024 57 0.0 0.0 0.0 8.671179548215925 0.0024796052468447024 58 0.0 0.0 0.0 8.90054303354906 0.0024796052468447024 59 0.0 0.0 0.0 9.261325596964964 0.0024796052468447024 60 0.0 0.0 0.0 9.442336779984627 0.0024796052468447024 61 0.0 0.0 0.0 9.619628555134023 0.0024796052468447024 62 0.0 0.0 0.0 9.764685462074437 0.0024796052468447024 63 0.0 0.0 0.0 10.007686776265219 0.0024796052468447024 64 0.0 0.0 0.0 10.170100919933546 0.0024796052468447024 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGAT 85 0.0 57.643486 37 TCCGGAG 25 2.3784133E-4 55.99653 25 GTGTAGA 100 0.0 55.99653 36 GTAGATC 65 3.6379788E-12 53.84282 38 TTTAGAT 20 0.006930438 52.496746 37 GTTTCGA 20 0.006930438 52.496746 36 AGGCGTC 20 0.006930438 52.496746 46 GTGGCTA 20 0.006930438 52.496746 54 GACGATT 20 0.006930438 52.496746 23 GCGTACC 20 0.006930438 52.496746 36 TGCCGTA 20 0.006930438 52.496746 53 GAGGCTC 20 0.006930438 52.496746 29 CGTATCA 55 2.242814E-9 50.905933 56 GTATCAT 55 2.242814E-9 50.905933 57 TCCGACT 35 2.0708505E-5 49.9969 20 CGCGTAC 35 2.0708505E-5 49.9969 35 TACGCTG 50 6.10853E-8 48.996964 14 CCGACTA 50 6.10853E-8 48.996964 21 TAGATCT 80 0.0 48.122017 39 TATCATT 60 4.8457878E-9 46.663773 58 >>END_MODULE