SRR1779709_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779709_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	172818
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTTT	20	0.006939708	52.504562	54
CAGTGTT	20	0.006939708	52.504562	34
TCTCGGT	160	0.0	52.48937	43
CGACTAG	20	0.006947657	52.48937	22
ATCTCGG	150	0.0	51.322937	42
TCGGTGG	150	0.0	51.322937	45
GGTGGTC	130	0.0	48.45172	47
ATCGTAC	30	5.862955E-4	46.67072	10
CTCGGTG	175	0.0	45.990685	44
GTAGATC	95	0.0	44.214363	38
CTTCCGA	120	0.0	43.7538	18
TCGTTGG	40	4.584014E-5	43.74114	45
CGGTGGT	145	0.0	43.439476	46
CCGTATC	150	0.0	42.003647	55
CTAACGC	50	3.4616132E-6	42.003647	12
TCGCCGT	135	0.0	41.473083	52
GACGCTT	60	2.5809823E-7	40.83688	14
GTATCAT	105	0.0	40.00347	57
TGTGTCG	35	0.0012522748	40.00347	35
CGTATCA	115	0.0	39.56865	56