##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779709_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 172818 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.112580865419112 34.0 23.0 34.0 12.0 34.0 2 27.706083857005638 34.0 23.0 34.0 12.0 34.0 3 26.653595111620316 32.0 21.0 34.0 11.0 34.0 4 28.74828432223495 33.0 23.0 34.0 12.0 34.0 5 28.464477079933804 34.0 23.0 34.0 11.0 34.0 6 30.70825955629622 36.0 26.0 38.0 11.0 38.0 7 31.721145945445496 37.0 27.0 38.0 12.0 38.0 8 30.93119350993531 37.0 26.0 38.0 11.0 38.0 9 32.347446446550705 37.0 31.0 38.0 12.0 38.0 10-11 31.986448170908123 37.0 31.0 38.0 11.0 38.0 12-13 31.13629945954704 36.0 27.0 38.0 11.0 38.0 14-15 31.040661273709915 36.5 26.5 38.0 11.0 38.0 16-17 30.78284380099295 36.0 27.0 38.0 11.0 38.0 18-19 31.337823606337302 37.0 27.0 38.0 11.5 38.0 20-21 30.27336851485378 35.5 24.5 38.0 11.0 38.0 22-23 30.246866645835503 35.5 26.0 38.0 11.0 38.0 24-25 31.34918527005289 36.5 28.5 38.0 11.0 38.0 26-27 30.0050052656552 35.0 24.0 38.0 11.0 38.0 28-29 31.953691166429422 37.0 29.5 38.0 11.0 38.0 30-31 32.42250228564154 37.0 31.0 38.0 11.0 38.0 32-33 32.51438218241155 38.0 31.0 38.0 11.0 38.0 34-35 32.57115867560092 38.0 32.0 38.0 11.0 38.0 36-37 30.608377020912172 36.0 25.0 38.0 11.0 38.0 38-39 29.019873508546564 34.0 22.5 37.5 11.0 38.0 40-41 30.046094735502088 35.0 24.5 37.5 11.0 38.0 42-43 31.058561608165817 36.5 27.5 38.0 11.0 38.0 44-45 32.60284518973718 37.0 31.5 38.0 11.0 38.0 46-47 31.282762790912983 37.0 28.5 38.0 11.0 38.0 48-49 30.714312166556724 36.0 25.0 38.0 11.0 38.0 50-51 28.649266858776286 34.0 21.5 37.5 11.0 38.0 52-53 31.779872466988394 36.5 29.0 38.0 11.0 38.0 54-55 30.892650071173144 36.5 27.0 38.0 11.0 38.0 56-57 31.31629807080281 36.5 27.5 38.0 11.0 38.0 58-59 32.33623523012649 37.0 31.0 38.0 11.0 38.0 60-61 32.793331713131735 38.0 34.0 38.0 11.0 38.0 62-63 32.677982038907984 38.0 33.0 38.0 11.0 38.0 64-65 32.41846335451168 37.5 31.5 38.0 11.0 38.0 66-67 30.463918689025448 36.5 24.5 38.0 11.0 38.0 68-69 30.540273582612922 36.5 25.0 38.0 11.0 38.0 70-71 30.119440683262162 35.5 24.0 38.0 11.0 38.0 72-73 28.954964181971786 34.0 22.5 37.5 11.0 38.0 74-75 30.973978405027253 36.0 26.0 38.0 11.0 38.0 76 31.345548496105728 37.0 27.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 2.0 5 0.0 6 2.0 7 0.0 8 1.0 9 0.0 10 0.0 11 15.0 12 66.0 13 362.0 14 867.0 15 1586.0 16 2576.0 17 4034.0 18 5190.0 19 5437.0 20 5019.0 21 3857.0 22 3083.0 23 2598.0 24 2540.0 25 2512.0 26 2910.0 27 3219.0 28 3808.0 29 4654.0 30 5655.0 31 7204.0 32 9402.0 33 12656.0 34 17366.0 35 23345.0 36 27278.0 37 15573.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.43328819914592 17.764353250240138 11.425314492703306 30.377044057910634 2 21.240842967746413 16.125635061162612 38.30850953025727 24.32501244083371 3 19.913434943119352 16.890023030008447 36.99788216505225 26.19865986181995 4 14.551724936059902 19.469036790149175 32.51976067307803 33.45947760071289 5 14.375817333842539 28.70765776713074 39.278894559594484 17.637630339432235 6 27.349581640801308 32.613500908470186 17.145204781909293 22.89171266881922 7 27.15862930944693 25.553472439213508 20.185397354442244 27.102500896897315 8 23.352718224691145 31.53140641726702 17.47128432138414 27.644591036657694 9 22.846975088967973 15.83774556606776 19.202036860226254 42.11324248473802 10-11 24.613158960708294 23.177767490307275 26.9284184943001 25.28065505468434 12-13 24.411640462702028 19.24617067200583 28.88820734791188 27.45398151738026 14-15 23.683045595396194 22.139474057292976 23.598561454978924 30.578918892331906 16-17 25.171504873892196 22.499182621225227 25.72587575263948 26.60343675224309 18-19 22.154839680344423 22.390067761890155 27.77282696124668 27.68226559651874 20-21 24.688971958290416 21.959447729929288 26.94399759278762 26.40758271899267 22-23 25.471037555697006 21.08037729298073 27.045020542792663 26.4035646085296 24-25 22.4382862499566 24.524922749314293 23.882903005543533 29.153887995185574 26-27 23.57527869478545 23.397920892054774 27.041133701165123 25.985666711994654 28-29 23.27762796995614 24.399064890575993 26.012360109713335 26.310947029754534 30-31 22.94552156540508 23.937064373609395 26.33505293339853 26.782361127586995 32-33 22.955448953493082 24.00542783239687 26.226904225955224 26.81221898815483 34-35 23.247006130957722 23.645417116337743 26.188361306973206 26.919215445731332 36-37 24.50219606617711 21.296633855875562 30.31815472573766 23.883015352209664 38-39 24.14992361464747 20.126672376278876 33.30488171843896 22.418522290634694 40-41 23.444380790352355 23.035837253846733 25.54294047185042 27.976841483950487 42-43 20.851838242740047 23.550396523439872 27.30760439662181 28.29016083719827 44-45 20.695332143198144 22.13072776670264 29.520078467908306 27.653861622190913 46-47 23.34517657815095 21.07248875952619 29.534815089142597 26.04751957318026 48-49 23.216471221366756 21.402345343598913 30.483680100456862 24.89750333457747 50-51 25.311537070524416 20.366003616636526 31.24658227848101 23.075877034358047 52-53 19.703891880318388 23.168420534869526 29.688065112537863 27.439622472274223 54-55 21.90147446877459 22.232767001527705 28.69774547474654 27.168013054951164 56-57 21.94481896616574 22.69186924594793 28.00483759902322 27.35847418886311 58-59 19.73340817424817 23.81185225477545 28.67641527449063 27.778324296485756 60-61 19.710893014212306 23.15199527799639 28.286306189528265 28.850805518263044 62-63 19.343153338483486 23.69676611085553 28.21153807205002 28.74854247861097 64-65 20.294018933870333 24.165277874221697 27.217438603800666 28.323264588107307 66-67 19.046337687889704 25.2130260550034 23.572761598888935 32.16787465821796 68-69 19.53435876658612 25.65888668624926 23.573485363700822 31.2332691834638 70-71 19.89879028641365 25.691585242709458 23.07569896330931 31.333925507567585 72-73 19.389278522324837 25.6000740689304 22.29301205934773 32.717635349397035 74-75 20.99883109969215 25.63103256718283 25.061049001226763 28.309087331898247 76 21.810080435160003 24.528094438979224 25.501996412244658 28.159828713616108 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 0.5 8 0.0 9 0.5 10 2.0 11 1.5 12 0.0 13 0.0 14 1.0 15 5.0 16 9.0 17 10.0 18 15.5 19 24.5 20 39.0 21 50.0 22 59.5 23 103.0 24 157.5 25 178.0 26 238.5 27 379.0 28 599.5 29 740.0 30 844.0 31 1163.5 32 1632.5 33 1886.0 34 2194.5 35 2893.5 36 3749.0 37 4214.0 38 4800.5 39 5999.0 40 7191.5 41 8249.5 42 8727.0 43 9096.0 44 9770.5 45 10139.0 46 10202.0 47 10244.5 48 10120.5 49 9465.5 50 8977.0 51 8460.0 52 7417.0 53 6411.5 54 5932.0 55 5631.0 56 4860.0 57 4164.0 58 3938.0 59 3776.0 60 3431.0 61 3140.0 62 3032.0 63 2962.5 64 2786.0 65 2545.5 66 2408.5 67 2405.0 68 2308.5 69 2150.0 70 1978.0 71 1868.0 72 1779.5 73 1595.0 74 1426.5 75 1354.0 76 1222.5 77 958.5 78 720.5 79 615.0 80 524.5 81 363.0 82 238.5 83 185.0 84 157.0 85 97.0 86 51.5 87 38.0 88 29.0 89 14.0 90 8.0 91 5.0 92 2.0 93 1.5 94 1.5 95 1.0 96 0.0 97 0.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0017359302850397528 9 0.0017359302850397528 10-11 0.004629147426772675 12-13 0.00405050399842609 14-15 0.002603895427559629 16-17 0.00549711256929255 18-19 0.00405050399842609 20-21 0.0023145737133863373 22-23 0.004629147426772675 24-25 0.0023145737133863373 26-27 0.002025251999213045 28-29 0.0023145737133863373 30-31 0.0037611822842527976 32-33 0.0028932171417329214 34-35 0.0037611822842527976 36-37 0.005207790855119258 38-39 0.005786434283465843 40-41 0.005207790855119258 42-43 0.002025251999213045 44-45 0.004918469140945967 46-47 0.0028932171417329214 48-49 0.0043398257125993826 50-51 0.003182538855906214 52-53 0.00549711256929255 54-55 0.005786434283465843 56-57 0.0028932171417329214 58-59 0.00405050399842609 60-61 0.005786434283465843 62-63 0.0043398257125993826 64-65 0.0034718605700795055 66-67 0.006075755997639135 68-69 0.026328275989769587 70-71 0.004918469140945967 72-73 0.0034718605700795055 74-75 0.0034718605700795055 76 0.004629147426772675 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 172818.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 91.14180198081407 #Duplication Level Percentage of deduplicated Percentage of total 1 93.85733807857142 85.54326921603476 2 4.357680777947716 7.94333757118621 3 0.9926826852100288 2.714246661755857 4 0.38908146783104786 1.4184634438184736 5 0.17946776177001905 0.8178507602591494 6 0.09266225890401496 0.5067243151274794 7 0.05466377445896753 0.34875084350841695 8 0.01985791001244445 0.14479085616856296 9 0.024812466945357867 0.20353076540903714 >10 0.03175281834897691 0.35903556673205417 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 5.786434283465842E-4 0.0 4 0.0 0.0 0.0 5.786434283465842E-4 0.0 5 0.0 0.0 0.0 5.786434283465842E-4 0.0 6 0.0 0.0 0.0 5.786434283465842E-4 0.0 7 0.0 0.0 0.0 5.786434283465842E-4 0.0 8 0.0 0.0 0.0 0.0017359302850397528 0.0 9 0.0 0.0 0.0 0.005786434283465843 0.0 10 0.0 0.0 0.0 0.006365077711812427 0.0 11 0.0 0.0 0.0 0.009258294853545347 0.0 12 0.0 0.0 0.0 0.011572868566931686 0.0 13 0.0 0.0 0.0 0.01215151199527827 0.0 14 0.0 0.0 0.0 0.01215151199527827 0.0 15 0.0 0.0 0.0 0.01215151199527827 0.0 16 0.0 0.0 0.0 0.01215151199527827 0.0 17 0.0 0.0 0.0 0.01215151199527827 0.0 18 0.0 0.0 0.0 0.014466085708664606 0.0 19 0.0 0.0 0.0 0.018516589707090695 0.0 20 0.0 0.0 0.0 0.019673876563783867 0.0 21 0.0 0.0 0.0 0.02025251999213045 0.0 22 0.0 0.0 0.0 0.02835352798898263 0.0 23 0.0 0.0 0.0 0.03008945827402238 0.0 24 0.0 0.0 0.0 0.034718605700795054 0.0 25 0.0 0.0 0.0 0.03529724912914164 0.0 26 0.0 0.0 0.0 0.04281961369764724 0.0 27 0.0 0.0 0.0 0.0810100799685218 0.0 28 0.0 0.0 0.0 0.1174646159543566 0.0 29 0.0 0.0 0.0 0.1469754308000324 0.0 30 0.0 0.0 0.0 0.20368248677799766 0.0 31 0.0 0.0 0.0 0.22972144105359396 0.0 32 0.0 0.0 0.0 0.2794847758914002 0.0 33 0.0 0.0 0.0 0.3269335370158201 0.0 34 0.0 5.786434283465842E-4 0.0 0.3923202444189841 0.0 35 0.0 5.786434283465842E-4 0.0 0.5618627689245334 0.0 36 0.0 5.786434283465842E-4 0.0 0.6677545163119583 0.0 37 0.0 5.786434283465842E-4 0.0 1.009154139036443 0.0 38 0.0 5.786434283465842E-4 0.0 1.3158351560601327 0.0 39 0.0 5.786434283465842E-4 0.0 1.7781712553090534 0.0 40 0.0 5.786434283465842E-4 0.0 2.2763832471154624 0.0 41 0.0 5.786434283465842E-4 0.0 2.850976171463621 0.0 42 0.0 5.786434283465842E-4 0.0 3.4469789026606024 0.0 43 0.0 5.786434283465842E-4 0.0 4.05050399842609 0.0 44 0.0 5.786434283465842E-4 0.0 4.715365297596315 0.0 45 0.0 5.786434283465842E-4 0.0 5.1684431019916905 0.0 46 0.0 5.786434283465842E-4 0.0 5.727412653774491 0.0 47 0.0 5.786434283465842E-4 0.0 6.429885775787245 0.0 48 0.0 5.786434283465842E-4 0.0 6.896272379034591 0.0 49 0.0 5.786434283465842E-4 0.0 7.334884097721302 0.0 50 0.0 5.786434283465842E-4 0.0 7.945931558055295 0.0 51 0.0 5.786434283465842E-4 0.0 8.692381580622389 0.0 52 0.0 5.786434283465842E-4 0.0 9.271603652397319 0.0 53 0.0 5.786434283465842E-4 0.0 9.9694476269833 0.0 54 0.0 5.786434283465842E-4 0.0 10.685229547848024 0.0 55 0.0 5.786434283465842E-4 0.0 11.170132740802464 0.0 56 0.0 5.786434283465842E-4 0.0 11.673552523463991 0.0 57 0.0 5.786434283465842E-4 0.0 12.081496140448333 0.0 58 0.0 5.786434283465842E-4 0.0 12.499855339142913 0.0 59 0.0 5.786434283465842E-4 0.0 12.981286671527272 0.0 60 0.0 5.786434283465842E-4 0.0 13.294332766262773 0.0 61 0.0 5.786434283465842E-4 0.0 13.582497193579373 0.0 62 0.0 5.786434283465842E-4 0.0 13.805274913492807 0.0 63 0.0 5.786434283465842E-4 0.0 14.115427791086576 0.0 64 0.0 5.786434283465842E-4 0.0 14.427316598965385 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTTT 20 0.006939708 52.504562 54 CAGTGTT 20 0.006939708 52.504562 34 TCTCGGT 160 0.0 52.48937 43 CGACTAG 20 0.006947657 52.48937 22 ATCTCGG 150 0.0 51.322937 42 TCGGTGG 150 0.0 51.322937 45 GGTGGTC 130 0.0 48.45172 47 ATCGTAC 30 5.862955E-4 46.67072 10 CTCGGTG 175 0.0 45.990685 44 GTAGATC 95 0.0 44.214363 38 CTTCCGA 120 0.0 43.7538 18 TCGTTGG 40 4.584014E-5 43.74114 45 CGGTGGT 145 0.0 43.439476 46 CCGTATC 150 0.0 42.003647 55 CTAACGC 50 3.4616132E-6 42.003647 12 TCGCCGT 135 0.0 41.473083 52 GACGCTT 60 2.5809823E-7 40.83688 14 GTATCAT 105 0.0 40.00347 57 TGTGTCG 35 0.0012522748 40.00347 35 CGTATCA 115 0.0 39.56865 56 >>END_MODULE